| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593404
Identifier: 83593404
GI number: 83593404
Start: 2393516
End: 2394367
Strand: Reverse
Name: 83593404
Synonym: Rru_A2069
Alternate gene names: NA
Gene position: 2394367-2393516 (Counterclockwise)
Preceding gene: 83593407
Following gene: 83593402
Centisome position: 55.01
GC content: 66.9
Gene sequence:
>852_bases ATGGGCAAGGGTTTCGCGGCGGTTATGATCGGGGCGGCAGGCGCCCTCGCGGCTGGGGGAGTCCCCTTGGCTTCGACCGC CCAGGCTGCCGGACCGACGCTGGCCCCGCACGAGGCGGTTTACGCCCTGTCGCTGGCCCGCGCCACGCCGGGTGGCGTGG TCAATGCCCGGGGCGAGATGAATTACAAGCTGGAGAACACCTGCGCCGGCTGGACGATGGAAACCCGCACCACCCTTGAT TTGACCTATGCCGAGGGCGGCGAGATGGCGACGCAATGGGAATTCGTCGCCTATGAATCCAAGGACGGCGGCGATTATTC CTTTTTCGTGCGCAACAAGCGCAACGGCGAGGTCGACGAGGTGCTCGAGGGCTCGGCCGCCCTGGCCGGCCAGCCGCCCA AGGGCGAGGCCAGCTTCCACAAGCCCGAAAACGATGTGGTGCCGCTGCCGGCGGGAACGCTGTTTCCCAGCGCCCATACC CTTGACATCCTGCGCGCCGCCGAGCGCGGCGAGCGCTATCTAAGCCGGACGGTGTTCGACGGCGCCTCGGAAGAGGGTCC GTCGCTGGTCACCGCCTTCATCGGCCCACCCTTGCCCGCTGGCGCCGAGGCGACCAAGGGGTTGAGCGGACCGGTGTCGA ACGAGGCCGGAAAGGCCTTGCTCAACACGCCGTCCTGGCGGATGACCATCGCCTTCTTCCCGCCCGACGACCGGGAAGAC CTGCCCAATTACGAGGTGCGGGTGCGCTACCACGACAACGGCGTGGCCCAGGAAATGGTCCAGGACTTCGGCTTCTTCAG CTTGCGCACCCTGCTCAAGGACATCAAGCCGCTGCCCGAACCCGACTGCTAA
Upstream 100 bases:
>100_bases TGTGTCCACCCGCGAGCCATCGCCATATCATGGCGTAAGGCCTTTCACAACAAAGTTGGATCCAAAAATAGAAATTGGAT CCAGATCAGGAGTTTGCTTT
Downstream 100 bases:
>100_bases AGGTCGGCTCCGGGGGAAGGATGAGATGGTGATTTTTTGCGCATTGCCAGGGAAATCATCTGCGCCACCAAAGCCTATTT CTCGTTAATCAGAGCGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MGKGFAAVMIGAAGALAAGGVPLASTAQAAGPTLAPHEAVYALSLARATPGGVVNARGEMNYKLENTCAGWTMETRTTLD LTYAEGGEMATQWEFVAYESKDGGDYSFFVRNKRNGEVDEVLEGSAALAGQPPKGEASFHKPENDVVPLPAGTLFPSAHT LDILRAAERGERYLSRTVFDGASEEGPSLVTAFIGPPLPAGAEATKGLSGPVSNEAGKALLNTPSWRMTIAFFPPDDRED LPNYEVRVRYHDNGVAQEMVQDFGFFSLRTLLKDIKPLPEPDC
Sequences:
>Translated_283_residues MGKGFAAVMIGAAGALAAGGVPLASTAQAAGPTLAPHEAVYALSLARATPGGVVNARGEMNYKLENTCAGWTMETRTTLD LTYAEGGEMATQWEFVAYESKDGGDYSFFVRNKRNGEVDEVLEGSAALAGQPPKGEASFHKPENDVVPLPAGTLFPSAHT LDILRAAERGERYLSRTVFDGASEEGPSLVTAFIGPPLPAGAEATKGLSGPVSNEAGKALLNTPSWRMTIAFFPPDDRED LPNYEVRVRYHDNGVAQEMVQDFGFFSLRTLLKDIKPLPEPDC >Mature_282_residues GKGFAAVMIGAAGALAAGGVPLASTAQAAGPTLAPHEAVYALSLARATPGGVVNARGEMNYKLENTCAGWTMETRTTLDL TYAEGGEMATQWEFVAYESKDGGDYSFFVRNKRNGEVDEVLEGSAALAGQPPKGEASFHKPENDVVPLPAGTLFPSAHTL DILRAAERGERYLSRTVFDGASEEGPSLVTAFIGPPLPAGAEATKGLSGPVSNEAGKALLNTPSWRMTIAFFPPDDREDL PNYEVRVRYHDNGVAQEMVQDFGFFSLRTLLKDIKPLPEPDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30067; Mature: 29936
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKGFAAVMIGAAGALAAGGVPLASTAQAAGPTLAPHEAVYALSLARATPGGVVNARGEM CCCCEEEEEEECCHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCEEECCCCC NYKLENTCAGWTMETRTTLDLTYAEGGEMATQWEFVAYESKDGGDYSFFVRNKRNGEVDE CEEECCCCCCCEEECCEEEEEEECCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCHHH VLEGSAALAGQPPKGEASFHKPENDVVPLPAGTLFPSAHTLDILRAAERGERYLSRTVFD HHCCCHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GASEEGPSLVTAFIGPPLPAGAEATKGLSGPVSNEAGKALLNTPSWRMTIAFFPPDDRED CCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCEECCCCEEEEEEEECCCCCCC LPNYEVRVRYHDNGVAQEMVQDFGFFSLRTLLKDIKPLPEPDC CCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GKGFAAVMIGAAGALAAGGVPLASTAQAAGPTLAPHEAVYALSLARATPGGVVNARGEM CCCEEEEEEECCHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCEEECCCCC NYKLENTCAGWTMETRTTLDLTYAEGGEMATQWEFVAYESKDGGDYSFFVRNKRNGEVDE CEEECCCCCCCEEECCEEEEEEECCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCHHH VLEGSAALAGQPPKGEASFHKPENDVVPLPAGTLFPSAHTLDILRAAERGERYLSRTVFD HHCCCHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GASEEGPSLVTAFIGPPLPAGAEATKGLSGPVSNEAGKALLNTPSWRMTIAFFPPDDRED CCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCEECCCCEEEEEEEECCCCCCC LPNYEVRVRYHDNGVAQEMVQDFGFFSLRTLLKDIKPLPEPDC CCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA