| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593332
Identifier: 83593332
GI number: 83593332
Start: 2306872
End: 2307765
Strand: Direct
Name: 83593332
Synonym: Rru_A1997
Alternate gene names: NA
Gene position: 2306872-2307765 (Clockwise)
Preceding gene: 83593331
Following gene: 83593333
Centisome position: 53.0
GC content: 67.23
Gene sequence:
>894_bases ATGAAAGCGCCCTCTCCTCCTCTGCGCGCTCTGCTCATGACCGCGCTCTCGCCGCTGTTCGCCGCCTGTACGGTGGGAAC GCTGAACGCGATCATTCCGTCCGATGGCTATCGGTCGCAAACCAATGTCGCCTATGGTCCCGACCCCCGCCAAAGGCTTG ATGTCCATGTGCCCGTCGCCGCCGCGCCGGCCGATGGGCGGCCGGTGGCGGTATGGATCTATGGCGGCTCGTGGCAAAGC GGCGCGCGCGGCGACTACGCCTTTATCGCCGATACCCTGGCCGCGCTCGGCTGGATCACGGTCATTCCCGATTACCGGCT GTTCCCCGAGGTGCGCTTCCCCGCCTTTGTGGAGGACACCGCCCAGGCCGTGGCCTGGACAAGGTCGGAGCAGGCCCGCG ACATTCTGGGGCCGACCAATGGCACCCTGGTGCTGATGGGCCATTCCGCCGGCGCCTATAACGCGGCGATGGTGGCTTAT GATCCGCAGTGGCTGCGCGCGGCGCGGGCCGATCCGGCGATGGTCAGCGGGTTCGTCGGTCTGGCCGGCCCCTATAACCT GTTCCCCTATGACGTCGAGGTGACCAAGCGGGTCTTCGGCCACGAAACCGACCCCACCGTGGTCGAACCCTTGAGCCATA TCACCGCCGCCTCGCCCCCGGCCCTGCTGGTCACCGGCCTGCGCGACACCGTCGTCGGCCCCTATCATACCGACGCCATG GAAGCAGCCTTGGCCGCCAAGGGCGTGGATCATAGGACGGTGCGCCTGGCCGACGCCAACCATGCCGGGGTGGTTCTGGG CCTGACCCGCTATTTCCGCGACAAGGCGCTGACGGTGCCCTTGGCGGCCTTTCTAAAAGGCCTGGAAAAGCCCGCGCCCC GACACGACGGTTGA
Upstream 100 bases:
>100_bases CCGCTTTGATGCGCAGCTTTGATGCGGTATTTGGGCCCTGCCCGACGGAAAGCTTGACCTCGACGTGAACCAATCGCGCC AAATATGCGTAGTATAGGCC
Downstream 100 bases:
>100_bases CCGGGCGGCCGTTCACCCGATATTTCCCATCTGGATCGGAGCGTTCTTGCGAATTCTCCACAAGCGTTCTGATGATCGGA CCCTTCGGCGGGCCGCGGGA
Product: carboxylesterase family protein
Products: NA
Alternate protein names: Esterase/Lipase/Thioesterase Family Protein; Lipase; Esterase; Alpha/Beta Hydrolase Fold-3 Domain Protein; Carboxylesterase Family Protein; Esterase/Lipase-Like Protein; Esterase/Lipase; Esterase/Lipase/Thioesterase; Carboxylesterase; Lipase/Esterase; Hydrolase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Para-Nitrobenzyl Esterase; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Family Protein; Carboxylesterase LipQ; Dienelactone Hydrolase; Alpha/Beta Hydrolase Family Protein; Conserved Domain Protein; Peptidase; Esterase/Lipase/Thiestherase Protein; Aylformamidase; Alpha/Beta Hydrolase Protein; Lipase Active Site
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MKAPSPPLRALLMTALSPLFAACTVGTLNAIIPSDGYRSQTNVAYGPDPRQRLDVHVPVAAAPADGRPVAVWIYGGSWQS GARGDYAFIADTLAALGWITVIPDYRLFPEVRFPAFVEDTAQAVAWTRSEQARDILGPTNGTLVLMGHSAGAYNAAMVAY DPQWLRAARADPAMVSGFVGLAGPYNLFPYDVEVTKRVFGHETDPTVVEPLSHITAASPPALLVTGLRDTVVGPYHTDAM EAALAAKGVDHRTVRLADANHAGVVLGLTRYFRDKALTVPLAAFLKGLEKPAPRHDG
Sequences:
>Translated_297_residues MKAPSPPLRALLMTALSPLFAACTVGTLNAIIPSDGYRSQTNVAYGPDPRQRLDVHVPVAAAPADGRPVAVWIYGGSWQS GARGDYAFIADTLAALGWITVIPDYRLFPEVRFPAFVEDTAQAVAWTRSEQARDILGPTNGTLVLMGHSAGAYNAAMVAY DPQWLRAARADPAMVSGFVGLAGPYNLFPYDVEVTKRVFGHETDPTVVEPLSHITAASPPALLVTGLRDTVVGPYHTDAM EAALAAKGVDHRTVRLADANHAGVVLGLTRYFRDKALTVPLAAFLKGLEKPAPRHDG >Mature_297_residues MKAPSPPLRALLMTALSPLFAACTVGTLNAIIPSDGYRSQTNVAYGPDPRQRLDVHVPVAAAPADGRPVAVWIYGGSWQS GARGDYAFIADTLAALGWITVIPDYRLFPEVRFPAFVEDTAQAVAWTRSEQARDILGPTNGTLVLMGHSAGAYNAAMVAY DPQWLRAARADPAMVSGFVGLAGPYNLFPYDVEVTKRVFGHETDPTVVEPLSHITAASPPALLVTGLRDTVVGPYHTDAM EAALAAKGVDHRTVRLADANHAGVVLGLTRYFRDKALTVPLAAFLKGLEKPAPRHDG
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31677; Mature: 31677
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAPSPPLRALLMTALSPLFAACTVGTLNAIIPSDGYRSQTNVAYGPDPRQRLDVHVPVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHEEEEEEEE AAPADGRPVAVWIYGGSWQSGARGDYAFIADTLAALGWITVIPDYRLFPEVRFPAFVEDT ECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH AQAVAWTRSEQARDILGPTNGTLVLMGHSAGAYNAAMVAYDPQWLRAARADPAMVSGFVG HHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECHHHHHHHCCCHHHHHHHHH LAGPYNLFPYDVEVTKRVFGHETDPTVVEPLSHITAASPPALLVTGLRDTVVGPYHTDAM CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCHHHCCCCCCHHHH EAALAAKGVDHRTVRLADANHAGVVLGLTRYFRDKALTVPLAAFLKGLEKPAPRHDG HHHHHHCCCCCEEEEEECCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKAPSPPLRALLMTALSPLFAACTVGTLNAIIPSDGYRSQTNVAYGPDPRQRLDVHVPVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHEEEEEEEE AAPADGRPVAVWIYGGSWQSGARGDYAFIADTLAALGWITVIPDYRLFPEVRFPAFVEDT ECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH AQAVAWTRSEQARDILGPTNGTLVLMGHSAGAYNAAMVAYDPQWLRAARADPAMVSGFVG HHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECHHHHHHHCCCHHHHHHHHH LAGPYNLFPYDVEVTKRVFGHETDPTVVEPLSHITAASPPALLVTGLRDTVVGPYHTDAM CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCHHHCCCCCCHHHH EAALAAKGVDHRTVRLADANHAGVVLGLTRYFRDKALTVPLAAFLKGLEKPAPRHDG HHHHHHCCCCCEEEEEECCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA