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The map label for this gene is ychJ [C]

Identifier: 83593317

GI number: 83593317

Start: 2293889

End: 2294389

Strand: Reverse

Name: ychJ [C]

Synonym: Rru_A1982

Alternate gene names: 83593317

Gene position: 2294389-2293889 (Counterclockwise)

Preceding gene: 83593318

Following gene: 83593316

Centisome position: 52.71

GC content: 66.27

Gene sequence:

>501_bases
GTGACCCAGGCGACCGACTGCCCCTGCGGCTCGGGCAAGGCGCTCAGCGCCTGCTGTGGCCCCTTGATCGATGGTCTTGC
CGTGGCGCCCACCGCCGAAGCCATGATGCGCTCGCGTTATGTCGCCTTCAGCCAGGGCAACGCCGAGTATCTGCGCGCCA
CTTTGGCGACCGGCCACGACGATGATTTCGATCCCGAGGAAATCCGCGCCACCGCCAAGAACGCCCATTGGCAGGGCCTG
GAAATCCGCAAGGTGACCGAGGGCGGCGCCGACGACGACGAGGGAACGGTCGAATTCATCGCCCGTTTCAAGATCGGCGG
CCGGTCGGTGCTGCACCACGAACGCTCGCATTTCCTGCGCGAGGACGGTCAGTGGCGTTGCGCCGATGCCGAGATGAACC
CGACCGAGCCGCCGCGCTCCGTCGTCAAGATCGGCCGCAATGATCCCTGTCCCTGCGGGTCGGGCAAGAAGTACAAGAAG
TGCTGCGGGGTCGCGGCCTAA

Upstream 100 bases:

>100_bases
CTATCGTTCCCAAACATAAAGTGAGGGCGGCGGCGCCCAAGCCGGCTTCGGCGCGGCGCCTGTCCGCTCGCGACGGTTTT
TCCAAGAGAGGTATCTTACC

Downstream 100 bases:

>100_bases
TACCCCAACGGCGGCCAACGGCCTGAGGCCAGCGGTTTGAGGAAAGGGATCTGCCAGTATGGTTGAACGGATCTCCCTGC
CTTTGCCCGGACCGACGCCG

Product: SEC-C domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTQATDCPCGSGKALSACCGPLIDGLAVAPTAEAMMRSRYVAFSQGNAEYLRATLATGHDDDFDPEEIRATAKNAHWQGL
EIRKVTEGGADDDEGTVEFIARFKIGGRSVLHHERSHFLREDGQWRCADAEMNPTEPPRSVVKIGRNDPCPCGSGKKYKK
CCGVAA

Sequences:

>Translated_166_residues
MTQATDCPCGSGKALSACCGPLIDGLAVAPTAEAMMRSRYVAFSQGNAEYLRATLATGHDDDFDPEEIRATAKNAHWQGL
EIRKVTEGGADDDEGTVEFIARFKIGGRSVLHHERSHFLREDGQWRCADAEMNPTEPPRSVVKIGRNDPCPCGSGKKYKK
CCGVAA
>Mature_165_residues
TQATDCPCGSGKALSACCGPLIDGLAVAPTAEAMMRSRYVAFSQGNAEYLRATLATGHDDDFDPEEIRATAKNAHWQGLE
IRKVTEGGADDDEGTVEFIARFKIGGRSVLHHERSHFLREDGQWRCADAEMNPTEPPRSVVKIGRNDPCPCGSGKKYKKC
CGVAA

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=157, Percent_Identity=44.5859872611465, Blast_Score=120, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 17931; Mature: 17800

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQATDCPCGSGKALSACCGPLIDGLAVAPTAEAMMRSRYVAFSQGNAEYLRATLATGHD
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHCCCC
DDFDPEEIRATAKNAHWQGLEIRKVTEGGADDDEGTVEFIARFKIGGRSVLHHERSHFLR
CCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
EDGQWRCADAEMNPTEPPRSVVKIGRNDPCPCGSGKKYKKCCGVAA
CCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
TQATDCPCGSGKALSACCGPLIDGLAVAPTAEAMMRSRYVAFSQGNAEYLRATLATGHD
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHCCCC
DDFDPEEIRATAKNAHWQGLEIRKVTEGGADDDEGTVEFIARFKIGGRSVLHHERSHFLR
CCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
EDGQWRCADAEMNPTEPPRSVVKIGRNDPCPCGSGKKYKKCCGVAA
CCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA