| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593316
Identifier: 83593316
GI number: 83593316
Start: 2292697
End: 2293830
Strand: Reverse
Name: 83593316
Synonym: Rru_A1981
Alternate gene names: NA
Gene position: 2293830-2292697 (Counterclockwise)
Preceding gene: 83593317
Following gene: 83593314
Centisome position: 52.7
GC content: 71.78
Gene sequence:
>1134_bases ATGGTTGAACGGATCTCCCTGCCTTTGCCCGGACCGACGCCGGGCACCAGCCGCGCCCTTGGCGGTCTGCGCTATGGCCG GCGAGGGGCGCGGCCCAAGGCCTATCTTCAGGCGGCGCTGCATGCCGATGAACTGCCCGGGGTGGTCGTTCTTGACCACC TCGCCCGGCTGCTCGACCGGGCCGAGGCCGAGGGGCGGATCACCGGCGAGATCATCCTTGTGCCGCTGGCCAATCCGATC GGCCTTGGCCAAAGAATCGGCGGCATGGCTTTCGGGCGCTTCGATCTGGACGGCGGCGGCAATTTCAACCGCCATTACGG CGATTACGCCCCGGCGGCCCTGGCTGTGGCCGAGGACCTTGGCGCCGACCCTGGGGCTGATGCGGCCCGGGTGCGCGAGG CCCTGAGCGCCGCTTGGGCCGGGACCAAGCCGCCACCCGGCGAGGTCGCCGCCCTGCGCCACACCCTGCAGGGGCTGGCG CTGGACGCCGATCTGGCCCTTGACCTGCATTGCGATCTGGACGCCGTGGTTCATCTCTATGGCGCCACCGCCGATTGGCC GGCGGCCGAGGATATCGCCCGGCTGCTGGGGGCGGAGGCGGTGCTGCTGGCCGATCACTCGGGCGACCAGCCCTTCGATG AAAGCCTGTCGGGGCCGTGGACCGCCCTGGCGGCGCGGCGCGGCGCGCCTTTGCCCGGGCGCTGTCTGGCCTTGACCGTG GAACTGCGCGGGGCGGCCGAGGTCGATGACGCTCTGGCGGCCAAGGATGCGCGCGCCCTGGCCGAGGTGTTGACGCGGCG CGGCCTGATCAGCGGCGCGGCCGCGCCCTTGCCCGAATGGCGGGGCCGGGTCTGCCCTTTGGCCGCCGTTGACATGGTGG CCGCGCCGGTCAGCGGCGTGATGATCTACAGGCGCCCCGTCGGCGCGATGGTCGAGACCGGCGAGGTCATCGGCGAGATC CTTGATCCCTTGGCCGAAGGCGCGGCGCGGCGGGTTGGCGTGCTGGCGGGAACGAGCGGCCCGATCTTCGCCCGGCTGTC CGATCAGCGTTTGGTGCGCGCTGGCGATATCGTCTGCAAGATCGCCGGCCAGGAGCCCTTGGCCCACCGCACCGGCACTC TGCTTACGGCGTGA
Upstream 100 bases:
>100_bases TCGGGCAAGAAGTACAAGAAGTGCTGCGGGGTCGCGGCCTAATACCCCAACGGCGGCCAACGGCCTGAGGCCAGCGGTTT GAGGAAAGGGATCTGCCAGT
Downstream 100 bases:
>100_bases GGCCCAGGGCCTCGCGGCGGCGGGCGAGCAGGGTGCGGACGATGGCGGCGCAGCGCGCCGTTTCATCCAACGGCGCCGGC GGGGCCCAGGGCTCGAGGGT
Product: succinylglutamate desuccinylase/aspartoacylase
Products: NA
Alternate protein names: Deacylase; Arginine Catabolism Protein; Succinylglutamate Desuccinylase; Amino Acid ABC Transporter-Like Protein; Arginine/Ornithine Transport Operon(AotO) Protein
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MVERISLPLPGPTPGTSRALGGLRYGRRGARPKAYLQAALHADELPGVVVLDHLARLLDRAEAEGRITGEIILVPLANPI GLGQRIGGMAFGRFDLDGGGNFNRHYGDYAPAALAVAEDLGADPGADAARVREALSAAWAGTKPPPGEVAALRHTLQGLA LDADLALDLHCDLDAVVHLYGATADWPAAEDIARLLGAEAVLLADHSGDQPFDESLSGPWTALAARRGAPLPGRCLALTV ELRGAAEVDDALAAKDARALAEVLTRRGLISGAAAPLPEWRGRVCPLAAVDMVAAPVSGVMIYRRPVGAMVETGEVIGEI LDPLAEGAARRVGVLAGTSGPIFARLSDQRLVRAGDIVCKIAGQEPLAHRTGTLLTA
Sequences:
>Translated_377_residues MVERISLPLPGPTPGTSRALGGLRYGRRGARPKAYLQAALHADELPGVVVLDHLARLLDRAEAEGRITGEIILVPLANPI GLGQRIGGMAFGRFDLDGGGNFNRHYGDYAPAALAVAEDLGADPGADAARVREALSAAWAGTKPPPGEVAALRHTLQGLA LDADLALDLHCDLDAVVHLYGATADWPAAEDIARLLGAEAVLLADHSGDQPFDESLSGPWTALAARRGAPLPGRCLALTV ELRGAAEVDDALAAKDARALAEVLTRRGLISGAAAPLPEWRGRVCPLAAVDMVAAPVSGVMIYRRPVGAMVETGEVIGEI LDPLAEGAARRVGVLAGTSGPIFARLSDQRLVRAGDIVCKIAGQEPLAHRTGTLLTA >Mature_377_residues MVERISLPLPGPTPGTSRALGGLRYGRRGARPKAYLQAALHADELPGVVVLDHLARLLDRAEAEGRITGEIILVPLANPI GLGQRIGGMAFGRFDLDGGGNFNRHYGDYAPAALAVAEDLGADPGADAARVREALSAAWAGTKPPPGEVAALRHTLQGLA LDADLALDLHCDLDAVVHLYGATADWPAAEDIARLLGAEAVLLADHSGDQPFDESLSGPWTALAARRGAPLPGRCLALTV ELRGAAEVDDALAAKDARALAEVLTRRGLISGAAAPLPEWRGRVCPLAAVDMVAAPVSGVMIYRRPVGAMVETGEVIGEI LDPLAEGAARRVGVLAGTSGPIFARLSDQRLVRAGDIVCKIAGQEPLAHRTGTLLTA
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39084; Mature: 39084
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERISLPLPGPTPGTSRALGGLRYGRRGARPKAYLQAALHADELPGVVVLDHLARLLDR CCCEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AEAEGRITGEIILVPLANPIGLGQRIGGMAFGRFDLDGGGNFNRHYGDYAPAALAVAEDL HCCCCCEEEEEEEEECCCCCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH GADPGADAARVREALSAAWAGTKPPPGEVAALRHTLQGLALDADLALDLHCDLDAVVHLY CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHH GATADWPAAEDIARLLGAEAVLLADHSGDQPFDESLSGPWTALAARRGAPLPGRCLALTV CCCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCHHHHHHHCCCCCCCCEEEEEE ELRGAAEVDDALAAKDARALAEVLTRRGLISGAAAPLPEWRGRVCPLAAVDMVAAPVSGV EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCE MIYRRPVGAMVETGEVIGEILDPLAEGAARRVGVLAGTSGPIFARLSDQRLVRAGDIVCK EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCHHHHHCCEEEE IAGQEPLAHRTGTLLTA ECCCCCCHHCCCCEECC >Mature Secondary Structure MVERISLPLPGPTPGTSRALGGLRYGRRGARPKAYLQAALHADELPGVVVLDHLARLLDR CCCEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AEAEGRITGEIILVPLANPIGLGQRIGGMAFGRFDLDGGGNFNRHYGDYAPAALAVAEDL HCCCCCEEEEEEEEECCCCCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH GADPGADAARVREALSAAWAGTKPPPGEVAALRHTLQGLALDADLALDLHCDLDAVVHLY CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHH GATADWPAAEDIARLLGAEAVLLADHSGDQPFDESLSGPWTALAARRGAPLPGRCLALTV CCCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCHHHHHHHCCCCCCCCEEEEEE ELRGAAEVDDALAAKDARALAEVLTRRGLISGAAAPLPEWRGRVCPLAAVDMVAAPVSGV EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCE MIYRRPVGAMVETGEVIGEILDPLAEGAARRVGVLAGTSGPIFARLSDQRLVRAGDIVCK EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCHHHHHCCEEEE IAGQEPLAHRTGTLLTA ECCCCCCHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA