Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is 83593315

Identifier: 83593315

GI number: 83593315

Start: 2291703

End: 2292707

Strand: Direct

Name: 83593315

Synonym: Rru_A1980

Alternate gene names: NA

Gene position: 2291703-2292707 (Clockwise)

Preceding gene: 83593308

Following gene: 83593319

Centisome position: 52.65

GC content: 69.75

Gene sequence:

>1005_bases
ATGAGCGATCAGCCCGCCTTGGCGCCGCTAACCTGGGCGGTGACCACCGGCGAAGCCGGGATGACCAATCAGGCGATCGG
TCTGGCCGAAGCCATCGGCCTGCCGGTGGTCGCCAAGGTCATCCATGTGCCCAAGCCCTGGCGCTGGCTGCCCACCCATT
GGGCGGCGCCTTTGGGCATCAAGACGCTTTGCGGTCCCGGTTCCGACGCCTTCACCCCGCCCTGGCCCGAGGTGCTGGTC
ACCAGCGGCCGGCGCAGCGGCGCCCTGTCGATCGCGCTGCGCCGGGCCTCTGGCGGACGCACCCTGACGGTCCATATCCA
GAACCCGTTGGTTCCCTTCGAGAATTTCGATCTGGTCATCGCCCCCGAACACGATGGGGTGGCGGCGGCCAATGTCGTGC
AAAGCCTGGGCGCCTTGCACAAGATCACCCCGGCCAAACTCGCCGAAGCGGCCGAGCGCTTCCGGGCGCGCTTCGCCGCC
CTGCCCCGGCCGCTGGTCGCCGTGCTGGTTGGCGGCACTAGCGGCGCCTATCGCCTGGAAGCCGAGGACACCCGGCGTTT
GGCCCGACAACTGGCCGATCTGGTCGCCGCGCGCGGCGTCGGCCTGGTGGTCACGCCCTCGCGGCGCACCGGGGCAGCCA
ATGCGGCGATCTTGCGCGAAACCCTGGAGCCGCTGGGCGCCCTGGTCTGGGATGGCGTTGGCGACAACCCCTATTTCGCC
ATGCTCGCCCTGGCCGATGTTTTGCTGGTGACCGAGGAAAGCGTCTCGATGGTGTCCGAGGCGTGTTTTTCCGGCAAGCC
GGTTTACACCATCGCCTTGCAAGGCGGCTCCAGGCGCTTCAAGCGCTTCCATGCCCTGATGCGCGACCGCGGCTATGCCC
GCCCCTTCACCGGAACCCTCGAGCCCTGGGCCCCGCCGGCGCCGTTGGATGAAACGGCGCGCTGCGCCGCCATCGTCCGC
ACCCTGCTCGCCCGCCGCCGCGAGGCCCTGGGCCTCACGCCGTAA

Upstream 100 bases:

>100_bases
GGCTTGCAAAGCGCGAGCGCGAAACCATCGTCTTGCCCGGGCCCGGCCCGGGGGATAGGGTGCGCCGGAAAAGCACCGGG
CGATTCCAGCGAGGACCCCT

Downstream 100 bases:

>100_bases
GCAGAGTGCCGGTGCGGTGGGCCAAGGGCTCCTGGCCGGCGATCTTGCAGACGATATCGCCAGCGCGCACCAAACGCTGA
TCGGACAGCCGGGCGAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MSDQPALAPLTWAVTTGEAGMTNQAIGLAEAIGLPVVAKVIHVPKPWRWLPTHWAAPLGIKTLCGPGSDAFTPPWPEVLV
TSGRRSGALSIALRRASGGRTLTVHIQNPLVPFENFDLVIAPEHDGVAAANVVQSLGALHKITPAKLAEAAERFRARFAA
LPRPLVAVLVGGTSGAYRLEAEDTRRLARQLADLVAARGVGLVVTPSRRTGAANAAILRETLEPLGALVWDGVGDNPYFA
MLALADVLLVTEESVSMVSEACFSGKPVYTIALQGGSRRFKRFHALMRDRGYARPFTGTLEPWAPPAPLDETARCAAIVR
TLLARRREALGLTP

Sequences:

>Translated_334_residues
MSDQPALAPLTWAVTTGEAGMTNQAIGLAEAIGLPVVAKVIHVPKPWRWLPTHWAAPLGIKTLCGPGSDAFTPPWPEVLV
TSGRRSGALSIALRRASGGRTLTVHIQNPLVPFENFDLVIAPEHDGVAAANVVQSLGALHKITPAKLAEAAERFRARFAA
LPRPLVAVLVGGTSGAYRLEAEDTRRLARQLADLVAARGVGLVVTPSRRTGAANAAILRETLEPLGALVWDGVGDNPYFA
MLALADVLLVTEESVSMVSEACFSGKPVYTIALQGGSRRFKRFHALMRDRGYARPFTGTLEPWAPPAPLDETARCAAIVR
TLLARRREALGLTP
>Mature_333_residues
SDQPALAPLTWAVTTGEAGMTNQAIGLAEAIGLPVVAKVIHVPKPWRWLPTHWAAPLGIKTLCGPGSDAFTPPWPEVLVT
SGRRSGALSIALRRASGGRTLTVHIQNPLVPFENFDLVIAPEHDGVAAANVVQSLGALHKITPAKLAEAAERFRARFAAL
PRPLVAVLVGGTSGAYRLEAEDTRRLARQLADLVAARGVGLVVTPSRRTGAANAAILRETLEPLGALVWDGVGDNPYFAM
LALADVLLVTEESVSMVSEACFSGKPVYTIALQGGSRRFKRFHALMRDRGYARPFTGTLEPWAPPAPLDETARCAAIVRT
LLARRREALGLTP

Specific function: Unknown

COG id: COG3660

COG function: function code M; Predicted nucleoside-diphosphate-sugar epimerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35583; Mature: 35451

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQPALAPLTWAVTTGEAGMTNQAIGLAEAIGLPVVAKVIHVPKPWRWLPTHWAAPLGI
CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCEECCCCCCCCCCC
KTLCGPGSDAFTPPWPEVLVTSGRRSGALSIALRRASGGRTLTVHIQNPLVPFENFDLVI
HHHCCCCCCCCCCCCCHHHEECCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEE
APEHDGVAAANVVQSLGALHKITPAKLAEAAERFRARFAALPRPLVAVLVGGTSGAYRLE
ECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEC
AEDTRRLARQLADLVAARGVGLVVTPSRRTGAANAAILRETLEPLGALVWDGVGDNPYFA
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
MLALADVLLVTEESVSMVSEACFSGKPVYTIALQGGSRRFKRFHALMRDRGYARPFTGTL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCC
EPWAPPAPLDETARCAAIVRTLLARRREALGLTP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDQPALAPLTWAVTTGEAGMTNQAIGLAEAIGLPVVAKVIHVPKPWRWLPTHWAAPLGI
CCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCEECCCCCCCCCCC
KTLCGPGSDAFTPPWPEVLVTSGRRSGALSIALRRASGGRTLTVHIQNPLVPFENFDLVI
HHHCCCCCCCCCCCCCHHHEECCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEE
APEHDGVAAANVVQSLGALHKITPAKLAEAAERFRARFAALPRPLVAVLVGGTSGAYRLE
ECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEC
AEDTRRLARQLADLVAARGVGLVVTPSRRTGAANAAILRETLEPLGALVWDGVGDNPYFA
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
MLALADVLLVTEESVSMVSEACFSGKPVYTIALQGGSRRFKRFHALMRDRGYARPFTGTL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCC
EPWAPPAPLDETARCAAIVRTLLARRREALGLTP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA