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The map label for this gene is 83593296

Identifier: 83593296

GI number: 83593296

Start: 2269075

End: 2269716

Strand: Direct

Name: 83593296

Synonym: Rru_A1961

Alternate gene names: NA

Gene position: 2269075-2269716 (Clockwise)

Preceding gene: 83593294

Following gene: 83593297

Centisome position: 52.13

GC content: 62.93

Gene sequence:

>642_bases
ATGACCGATCATCGAAAACCTCTGATTACTCAGCGAAAACAGCCCCGTCAGGCCCGCTCAAACGATCTGGTTGCCGCCAT
CCTGGAGGCGGCGGCTCAGGTTTTGACCAGGGACGGCGCTCATCGTTTCACCACCGCCCGGGTGGCCGAGAAAGCGGGAG
TCAGCGTCGGATCGCTCTATCAGTATTTCCCTAACAAGGCGGCGATCCTCTTCCGCCTTCAGAGCGACGAATGGCGGCAG
ACATCCGAGATGCTGCACACCACTCTGGGGAATGCGGAGAAACCGCCGCCCGAGCGACTGCGTACCCTGGTTCACGCTTT
CATTCGTTCGGAATGTGAGGAGGCAGCGACGCGCCTTGCGCTCAGCGATGCCGCCCCCCTTTATCGTGATGCGCCCGAAG
CGCGGCAAACGCGTGAGGCGGCACAGCGCATGGTCCAGACGTTTCTCCGCGAGGCGCTGCCGGAGGCCGCCGAGTCCACG
CGGGCTTTGGCTGGCGATCTGATCACCATGACGCTGGCCTCCGTGGGAAAGCAGTTTTCGAGCGCGCCCCGCACCCCCGC
CGAAATCTCCGCTTACGCCGATGCGCTGGCTGACATGTTCTGCGCCTATCTGGGACTCCTGAACGGTCGCGACAAAGGCT
GA

Upstream 100 bases:

>100_bases
ATTGTTCATGTCGATCTCCGATCCAGGGTCGACGCATCCTTGCGCCGGATCAAAAATACGACTAAATCGTCATGTTTCCG
ATTCGCATTGGCCAACCCCC

Downstream 100 bases:

>100_bases
TCTGTCCCACAGGGAACAGAGCGGCCCCTTCGCGCCTCTATACGGAATACGAATGGTCTGTGATCGAGCCTTTGCTGCCG
AACAAGCCGCGCGGGGGTCC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulatory Protein; Transcription Regulator Protein; Regulatory Protein TetR; Transcriptional Regulator Protein; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator TetR Family Protein; TetR Family Transcriptional Regulatory Protein; TetR Family Regulatory Protein; TetR Family Regulatory

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTDHRKPLITQRKQPRQARSNDLVAAILEAAAQVLTRDGAHRFTTARVAEKAGVSVGSLYQYFPNKAAILFRLQSDEWRQ
TSEMLHTTLGNAEKPPPERLRTLVHAFIRSECEEAATRLALSDAAPLYRDAPEARQTREAAQRMVQTFLREALPEAAEST
RALAGDLITMTLASVGKQFSSAPRTPAEISAYADALADMFCAYLGLLNGRDKG

Sequences:

>Translated_213_residues
MTDHRKPLITQRKQPRQARSNDLVAAILEAAAQVLTRDGAHRFTTARVAEKAGVSVGSLYQYFPNKAAILFRLQSDEWRQ
TSEMLHTTLGNAEKPPPERLRTLVHAFIRSECEEAATRLALSDAAPLYRDAPEARQTREAAQRMVQTFLREALPEAAEST
RALAGDLITMTLASVGKQFSSAPRTPAEISAYADALADMFCAYLGLLNGRDKG
>Mature_212_residues
TDHRKPLITQRKQPRQARSNDLVAAILEAAAQVLTRDGAHRFTTARVAEKAGVSVGSLYQYFPNKAAILFRLQSDEWRQT
SEMLHTTLGNAEKPPPERLRTLVHAFIRSECEEAATRLALSDAAPLYRDAPEARQTREAAQRMVQTFLREALPEAAESTR
ALAGDLITMTLASVGKQFSSAPRTPAEISAYADALADMFCAYLGLLNGRDKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23470; Mature: 23339

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDHRKPLITQRKQPRQARSNDLVAAILEAAAQVLTRDGAHRFTTARVAEKAGVSVGSLY
CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHH
QYFPNKAAILFRLQSDEWRQTSEMLHTTLGNAEKPPPERLRTLVHAFIRSECEEAATRLA
HHCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LSDAAPLYRDAPEARQTREAAQRMVQTFLREALPEAAESTRALAGDLITMTLASVGKQFS
HHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAPRTPAEISAYADALADMFCAYLGLLNGRDKG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TDHRKPLITQRKQPRQARSNDLVAAILEAAAQVLTRDGAHRFTTARVAEKAGVSVGSLY
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHH
QYFPNKAAILFRLQSDEWRQTSEMLHTTLGNAEKPPPERLRTLVHAFIRSECEEAATRLA
HHCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LSDAAPLYRDAPEARQTREAAQRMVQTFLREALPEAAESTRALAGDLITMTLASVGKQFS
HHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAPRTPAEISAYADALADMFCAYLGLLNGRDKG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA