| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83593217
Identifier: 83593217
GI number: 83593217
Start: 2180697
End: 2181020
Strand: Reverse
Name: 83593217
Synonym: Rru_A1882
Alternate gene names: NA
Gene position: 2181020-2180697 (Counterclockwise)
Preceding gene: 83593220
Following gene: 83593216
Centisome position: 50.11
GC content: 62.96
Gene sequence:
>324_bases TTGTCTTCGATCCATAAAAGCCGTCTGCGCGGCTTCCTCGGTTCGTTGCTCGCCCTGCTGGTGATCGCTTATTTCGGCTA TCACGGCATCCAGGGCGATCGCGGCGTGCTGTCGCTTGCCCGACTGACCAAGGAGATCGAGGAAGCGCGCCATCTGCTTG ATCTGCGCCGCGCCGAAGAGGCCGCCCTGCAGGCCAGCGTCACCCGGCTTTCCCCCGAGAGCGTCGATCGCGACCTTCTT GATGAACGGGCGCGCATCATGCTCAACCGCATCCGTCCCGACGAAGTCATCATCCAGATCGACGGCGAACCGGTCAGCCG GTAG
Upstream 100 bases:
>100_bases GACCAAACTTGGCCCTAGATTTATGGAATGACTGGGGGTTTTTCACTCCGCTTTCCCCTTGACCGGCTTGGTCCCGCCAT GATTGCCTGCTGGGATGTTT
Downstream 100 bases:
>100_bases GGCGACCGACGCCGCGCCCGGTCGCCGACAGCGCCCGACCACCCCCGTATTGGATCCAGATCGTGCAAAAGTGCTGTGCG CGGTCTTGGAGAAGGGGCGC
Product: septum formation initiator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSSIHKSRLRGFLGSLLALLVIAYFGYHGIQGDRGVLSLARLTKEIEEARHLLDLRRAEEAALQASVTRLSPESVDRDLL DERARIMLNRIRPDEVIIQIDGEPVSR
Sequences:
>Translated_107_residues MSSIHKSRLRGFLGSLLALLVIAYFGYHGIQGDRGVLSLARLTKEIEEARHLLDLRRAEEAALQASVTRLSPESVDRDLL DERARIMLNRIRPDEVIIQIDGEPVSR >Mature_106_residues SSIHKSRLRGFLGSLLALLVIAYFGYHGIQGDRGVLSLARLTKEIEEARHLLDLRRAEEAALQASVTRLSPESVDRDLLD ERARIMLNRIRPDEVIIQIDGEPVSR
Specific function: Unknown
COG id: COG2919
COG function: function code D; Septum formation initiator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12075; Mature: 11944
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIHKSRLRGFLGSLLALLVIAYFGYHGIQGDRGVLSLARLTKEIEEARHLLDLRRAEE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AALQASVTRLSPESVDRDLLDERARIMLNRIRPDEVIIQIDGEPVSR HHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC >Mature Secondary Structure SSIHKSRLRGFLGSLLALLVIAYFGYHGIQGDRGVLSLARLTKEIEEARHLLDLRRAEE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AALQASVTRLSPESVDRDLLDERARIMLNRIRPDEVIIQIDGEPVSR HHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA