| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is acyII [H]
Identifier: 83593175
GI number: 83593175
Start: 2137867
End: 2140332
Strand: Direct
Name: acyII [H]
Synonym: Rru_A1840
Alternate gene names: 83593175
Gene position: 2137867-2140332 (Clockwise)
Preceding gene: 83593172
Following gene: 83593177
Centisome position: 49.11
GC content: 70.72
Gene sequence:
>2466_bases ATGACGCGCCTTGGACACTGGATGCTCCGTCTCGGCCTAGGCGCCGTGGCCCTGGGTCTTGTCGCCGCCCTGGTCCTTGG GCTGGCGCTGACCGGATCGCTGCCGCGCACCAGCGGCCGGATCGAGGTGACGACCGGCGGCGCCCTGCCGGTGGACGATC CGCAACGGCCGGGCTCGTCCACAACCTGGGGCGGGCTTTCCGGCCCCATCGACATCATCCGCGACCGCTACGCCATCCCG ACCATCCGCGCCGCCAACGACCGCGATGCCGCCTTCGCCCTGGGCGTCGTCCATGCCCAGGACCGGTTGTGGCAAATGGA AGGCATGCGCCGCCTGGGGGCCGGACGCATGGCCGAATTGCTCGGCCCCCGCGCCCTGCCCATCGACCGCTTCATGCGCA CCCTGGGCCTGCACGCCCTGGCGGCGGAGACCTACCGGCGGATGCCCGCCGACGAGCGCGCGGTGATGGAAGCCTATTGC GCCGGCGTCAATCAGATCATCGGCGCGAAATGGACGATCCCGCCCCCGGAATTCCTGATGCTGCTGGCCCGGCCCGAGCC CTGGCGGCCCGTCGATTCGCTGGTCTGGGGCCGGTTGATGGGCCTGTGGCTTTCCGCCGATTGGCAAGAGGAACTGGTGC GCGCCGCCTTGGCCAAAAGCCTGTCGCCCGAGCGCCTGAAAAGCCTGTGGCCGGCCTTTGGCCGATCGGATGTCGCCGCC CGTCCCGCCGCCGCGCCGCTGTCGGGGGAGGCCGCCCTGGCGCTTCTCGCCGCCTTTCCCAAGGCCCTGGCCCCGACCCT GGCCTCGAACGCCTGGGCGGTCGGCGGCGGCAAGACCGCCAGCGGCCAGCCGCTGCTCGCCAGCGATCCCCACTTGGGGT TTCAGGCGCCGATTCAATGGTATCTGGCGCGCCTTGAAACCCCCGAAAGAACCCTGACCGGGGCGACTTTTCCCGGGGTT CCCCTGACGGTCATCGGCACCAATGAACGCGTCGCCTGGGGGCTGACCACCACCCATTCCGACACCATGGATCTGTTCGT CGAACGCGTCGTCGATGCCGATCATTATCTGACCGAAAACGGCCCCGAACCCTGGCTGCGGCGCACCGAGACCCTGGCCG TGCGCGGCGCCCCCAGCGAAACCCTGGAGGTTCGCGCCTCGCGCCATGGGCCGGTGATCTCGGACGTTCTGCCCGCCGCT TCGGCCGACCTGGGCCACGCCGCCCTCGGCGAGGGAGAGGCGCTGACCCTGGCGGCCACGGCGTTGCGCCCCGATGACCA AACGGCGCTGGCGCTGCGCGCCCTCAACCGGGCGGGCACGGCCGACGAGGTGCGCAAGGCGGCGCGCGGCTTCCAATCGC CCCAGCAGAACCTGATCTACGCCACCGCCGAGGGCGCCATCGGCCGGCTCTCGCCCGGGCTGACGCCGCTGCGCGCCGGG GGGCCGGGGTTGCTGCCGCAAACGGGCTGGACGTCGACCAGCCGCTGGACCGGCTATATTCCCTTTGAGGATCTTCCCGC CGAAAGCGATCCGGCAAGCGGCTTTGTTTACAACACCAACAGCGCCATCGTCGGCGAGGATTATCCCCATTACCTGATCG ATGCCTGGCCGGGCGAGGATCGGGCGGCGCGCCTTGCCCGCCTGCTGGCTTACCGCGATGACCATGGCCCGCGAGACATG GCGCTCTATCAGCTTGATACGGTCTCCCATGCCCTGGAAACCCTGTTGCCCCGCCTGCTTGATTTCCCCGCCGCCCTGCG CCCTGCGGGCTCGGCCGTCGCCCGCGCCCATGCCCTGCTGGCCGACCCCGGCTGGTCCTTCGACATGGGGGCGCACCGCA CCGAACCGCTGATCGCCACCGCCTGGCTGGTCGCCGTCAATCGCCTGCTGTTCGCCCCGGCGATGGGGCCGGCCTTCGCC GCCTGGGAAAGGCTGGACCCGGCCGTGCTGCACCGGGCGCTTGATGGCGCGGGATCGTGGTGCGACCCCGCGGCCGACGC CGAAGGCCTTACCGGCTGCGACCGTCTCAAGGCCCGGGCCCTCGACGAGGCCCTAAGCGGCCTCGTCGAGTCCCTGGGCG GCGCCGATCCCTTCACCGTGACCTGGGGCGAGGTCCACCGCGCCCATTTCCGTCACCCGCTGTTTCGCTATCTGCCGGCT CTGGCCAAGCTGACCACCCTGGAAACGGCGACGGGGGGCGATGATTTCACCCTGTCGCGCGGCAGTTGGGGCGGCGATCG GACCGACCCCTTCGCCCATGTCCATGGCGCCGGCCTGCGTGCCGTGATCGATTTCGCCACCATCGCCGCCCCGGGTTTCA TTCTGGCCACCGGCCAGTCCGGGCACCCGCTGTCCCCCCATTACCGCGACATGGTCGATCTGTGGCGGCGCGGCGCGCTG ATCACCGTCGATGGCGCCGACCCCTCGGGCGGCCATCTCATCCTCGAACCGGTGGGCGACCGCTAA
Upstream 100 bases:
>100_bases TAACAGACCTCCGCCGCCAAAGTCCCTTGTGGCTGGTGGGGGGCTCCGCTCAGATAAGGCGAAGCGCCCGCCGTTCCCAC CCCGGCCACCAGGAGGCCCC
Downstream 100 bases:
>100_bases AGAGGGCGGCCGCCCCGCCTGTGGTCAGACGGGTAGCACGCCGACTTGGGTATAGCTGCCCCGGAAATAGACCAAGGGTT GGCCACCGGTGCGGGTGATA
Product: penicillin amidase
Products: NA
Alternate protein names: Cephalosporin acylase II; Penicillin acylase II; Penicillin amidase II; Penicillin acylase II small subunit; Penicillin acylase II large subunit [H]
Number of amino acids: Translated: 821; Mature: 820
Protein sequence:
>821_residues MTRLGHWMLRLGLGAVALGLVAALVLGLALTGSLPRTSGRIEVTTGGALPVDDPQRPGSSTTWGGLSGPIDIIRDRYAIP TIRAANDRDAAFALGVVHAQDRLWQMEGMRRLGAGRMAELLGPRALPIDRFMRTLGLHALAAETYRRMPADERAVMEAYC AGVNQIIGAKWTIPPPEFLMLLARPEPWRPVDSLVWGRLMGLWLSADWQEELVRAALAKSLSPERLKSLWPAFGRSDVAA RPAAAPLSGEAALALLAAFPKALAPTLASNAWAVGGGKTASGQPLLASDPHLGFQAPIQWYLARLETPERTLTGATFPGV PLTVIGTNERVAWGLTTTHSDTMDLFVERVVDADHYLTENGPEPWLRRTETLAVRGAPSETLEVRASRHGPVISDVLPAA SADLGHAALGEGEALTLAATALRPDDQTALALRALNRAGTADEVRKAARGFQSPQQNLIYATAEGAIGRLSPGLTPLRAG GPGLLPQTGWTSTSRWTGYIPFEDLPAESDPASGFVYNTNSAIVGEDYPHYLIDAWPGEDRAARLARLLAYRDDHGPRDM ALYQLDTVSHALETLLPRLLDFPAALRPAGSAVARAHALLADPGWSFDMGAHRTEPLIATAWLVAVNRLLFAPAMGPAFA AWERLDPAVLHRALDGAGSWCDPAADAEGLTGCDRLKARALDEALSGLVESLGGADPFTVTWGEVHRAHFRHPLFRYLPA LAKLTTLETATGGDDFTLSRGSWGGDRTDPFAHVHGAGLRAVIDFATIAAPGFILATGQSGHPLSPHYRDMVDLWRRGAL ITVDGADPSGGHLILEPVGDR
Sequences:
>Translated_821_residues MTRLGHWMLRLGLGAVALGLVAALVLGLALTGSLPRTSGRIEVTTGGALPVDDPQRPGSSTTWGGLSGPIDIIRDRYAIP TIRAANDRDAAFALGVVHAQDRLWQMEGMRRLGAGRMAELLGPRALPIDRFMRTLGLHALAAETYRRMPADERAVMEAYC AGVNQIIGAKWTIPPPEFLMLLARPEPWRPVDSLVWGRLMGLWLSADWQEELVRAALAKSLSPERLKSLWPAFGRSDVAA RPAAAPLSGEAALALLAAFPKALAPTLASNAWAVGGGKTASGQPLLASDPHLGFQAPIQWYLARLETPERTLTGATFPGV PLTVIGTNERVAWGLTTTHSDTMDLFVERVVDADHYLTENGPEPWLRRTETLAVRGAPSETLEVRASRHGPVISDVLPAA SADLGHAALGEGEALTLAATALRPDDQTALALRALNRAGTADEVRKAARGFQSPQQNLIYATAEGAIGRLSPGLTPLRAG GPGLLPQTGWTSTSRWTGYIPFEDLPAESDPASGFVYNTNSAIVGEDYPHYLIDAWPGEDRAARLARLLAYRDDHGPRDM ALYQLDTVSHALETLLPRLLDFPAALRPAGSAVARAHALLADPGWSFDMGAHRTEPLIATAWLVAVNRLLFAPAMGPAFA AWERLDPAVLHRALDGAGSWCDPAADAEGLTGCDRLKARALDEALSGLVESLGGADPFTVTWGEVHRAHFRHPLFRYLPA LAKLTTLETATGGDDFTLSRGSWGGDRTDPFAHVHGAGLRAVIDFATIAAPGFILATGQSGHPLSPHYRDMVDLWRRGAL ITVDGADPSGGHLILEPVGDR >Mature_820_residues TRLGHWMLRLGLGAVALGLVAALVLGLALTGSLPRTSGRIEVTTGGALPVDDPQRPGSSTTWGGLSGPIDIIRDRYAIPT IRAANDRDAAFALGVVHAQDRLWQMEGMRRLGAGRMAELLGPRALPIDRFMRTLGLHALAAETYRRMPADERAVMEAYCA GVNQIIGAKWTIPPPEFLMLLARPEPWRPVDSLVWGRLMGLWLSADWQEELVRAALAKSLSPERLKSLWPAFGRSDVAAR PAAAPLSGEAALALLAAFPKALAPTLASNAWAVGGGKTASGQPLLASDPHLGFQAPIQWYLARLETPERTLTGATFPGVP LTVIGTNERVAWGLTTTHSDTMDLFVERVVDADHYLTENGPEPWLRRTETLAVRGAPSETLEVRASRHGPVISDVLPAAS ADLGHAALGEGEALTLAATALRPDDQTALALRALNRAGTADEVRKAARGFQSPQQNLIYATAEGAIGRLSPGLTPLRAGG PGLLPQTGWTSTSRWTGYIPFEDLPAESDPASGFVYNTNSAIVGEDYPHYLIDAWPGEDRAARLARLLAYRDDHGPRDMA LYQLDTVSHALETLLPRLLDFPAALRPAGSAVARAHALLADPGWSFDMGAHRTEPLIATAWLVAVNRLLFAPAMGPAFAA WERLDPAVLHRALDGAGSWCDPAADAEGLTGCDRLKARALDEALSGLVESLGGADPFTVTWGEVHRAHFRHPLFRYLPAL AKLTTLETATGGDDFTLSRGSWGGDRTDPFAHVHGAGLRAVIDFATIAAPGFILATGQSGHPLSPHYRDMVDLWRRGALI TVDGADPSGGHLILEPVGDR
Specific function: Unknown
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.11 [H]
Molecular weight: Translated: 87759; Mature: 87628
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLGHWMLRLGLGAVALGLVAALVLGLALTGSLPRTSGRIEVTTGGALPVDDPQRPGSS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCC TTWGGLSGPIDIIRDRYAIPTIRAANDRDAAFALGVVHAQDRLWQMEGMRRLGAGRMAEL CCCCCCCCCHHHHHCCCCCCCEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCHHHHH LGPRALPIDRFMRTLGLHALAAETYRRMPADERAVMEAYCAGVNQIIGAKWTIPPPEFLM HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHEE LLARPEPWRPVDSLVWGRLMGLWLSADWQEELVRAALAKSLSPERLKSLWPAFGRSDVAA EEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC RPAAAPLSGEAALALLAAFPKALAPTLASNAWAVGGGKTASGQPLLASDPHLGFQAPIQW CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHH YLARLETPERTLTGATFPGVPLTVIGTNERVAWGLTTTHSDTMDLFVERVVDADHYLTEN HHHHCCCCCHHCCCCCCCCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHCCHHHHCCC GPEPWLRRTETLAVRGAPSETLEVRASRHGPVISDVLPAASADLGHAALGEGEALTLAAT CCCHHHHCCCEEEEECCCCHHHHEECCCCCCHHHHHHHHCCCCCCCHHCCCCCEEEEEEE ALRPDDQTALALRALNRAGTADEVRKAARGFQSPQQNLIYATAEGAIGRLSPGLTPLRAG ECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC GPGLLPQTGWTSTSRWTGYIPFEDLPAESDPASGFVYNTNSAIVGEDYPHYLIDAWPGED CCCCCCCCCCCCCCCEEEECCHHCCCCCCCCCCCEEEECCCEEECCCCCCEEEECCCCCH RAARLARLLAYRDDHGPRDMALYQLDTVSHALETLLPRLLDFPAALRPAGSAVARAHALL HHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHH ADPGWSFDMGAHRTEPLIATAWLVAVNRLLFAPAMGPAFAAWERLDPAVLHRALDGAGSW CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCC CDPAADAEGLTGCDRLKARALDEALSGLVESLGGADPFTVTWGEVHRAHFRHPLFRYLPA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCHHHHHHHH LAKLTTLETATGGDDFTLSRGSWGGDRTDPFAHVHGAGLRAVIDFATIAAPGFILATGQS HHHHHHHEECCCCCCEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCEEEEECCC GHPLSPHYRDMVDLWRRGALITVDGADPSGGHLILEPVGDR CCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCC >Mature Secondary Structure TRLGHWMLRLGLGAVALGLVAALVLGLALTGSLPRTSGRIEVTTGGALPVDDPQRPGSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCC TTWGGLSGPIDIIRDRYAIPTIRAANDRDAAFALGVVHAQDRLWQMEGMRRLGAGRMAEL CCCCCCCCCHHHHHCCCCCCCEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCHHHHH LGPRALPIDRFMRTLGLHALAAETYRRMPADERAVMEAYCAGVNQIIGAKWTIPPPEFLM HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHEE LLARPEPWRPVDSLVWGRLMGLWLSADWQEELVRAALAKSLSPERLKSLWPAFGRSDVAA EEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC RPAAAPLSGEAALALLAAFPKALAPTLASNAWAVGGGKTASGQPLLASDPHLGFQAPIQW CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHH YLARLETPERTLTGATFPGVPLTVIGTNERVAWGLTTTHSDTMDLFVERVVDADHYLTEN HHHHCCCCCHHCCCCCCCCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHCCHHHHCCC GPEPWLRRTETLAVRGAPSETLEVRASRHGPVISDVLPAASADLGHAALGEGEALTLAAT CCCHHHHCCCEEEEECCCCHHHHEECCCCCCHHHHHHHHCCCCCCCHHCCCCCEEEEEEE ALRPDDQTALALRALNRAGTADEVRKAARGFQSPQQNLIYATAEGAIGRLSPGLTPLRAG ECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC GPGLLPQTGWTSTSRWTGYIPFEDLPAESDPASGFVYNTNSAIVGEDYPHYLIDAWPGED CCCCCCCCCCCCCCCEEEECCHHCCCCCCCCCCCEEEECCCEEECCCCCCEEEECCCCCH RAARLARLLAYRDDHGPRDMALYQLDTVSHALETLLPRLLDFPAALRPAGSAVARAHALL HHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHH ADPGWSFDMGAHRTEPLIATAWLVAVNRLLFAPAMGPAFAAWERLDPAVLHRALDGAGSW CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCC CDPAADAEGLTGCDRLKARALDEALSGLVESLGGADPFTVTWGEVHRAHFRHPLFRYLPA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCHHHHHHHH LAKLTTLETATGGDDFTLSRGSWGGDRTDPFAHVHGAGLRAVIDFATIAAPGFILATGQS HHHHHHHEECCCCCCEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCEEEEECCC GHPLSPHYRDMVDLWRRGALITVDGADPSGGHLILEPVGDR CCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3680178 [H]