Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is 83593173

Identifier: 83593173

GI number: 83593173

Start: 2135776

End: 2136636

Strand: Reverse

Name: 83593173

Synonym: Rru_A1838

Alternate gene names: NA

Gene position: 2136636-2135776 (Counterclockwise)

Preceding gene: 83593174

Following gene: 83593170

Centisome position: 49.09

GC content: 67.25

Gene sequence:

>861_bases
ATGACGAAACCCCTGCTTCAGCTTCAAGACAGCGTCGCCGTGCTGCGTCCCGAGGGCTTCCGCCATATGGCCTATGTGGA
ATGGCGCGGCGATCATGACGCGCCGCCGGCCTTTTGCGTTCATGGCCTGACTCGCAACGGCCGCGATTTCGACGCGTTGG
CCCAGGCCCTGGCGGCGAGCCGGCGGGTGTTCTGCCCCGATGTTCTGGGACGCGGGCGCAGCGATTGTCTGACCGATCCG
GCGGGCTATGCCAATCTCGCCTATGCCGCCGATATGGTGACGCTGATCGCGCGCGGCGGCGGCGGCGCCATCGATTGGGT
GGGAACCTCGATGGGCGGGTTGATCGGCATGATCCTCGCCGCCATGCCGGGCAGCCCGATCCGCAGGCTGGTGCTCAACG
ATGTCGGGCCCTTCGTTCCGCAGGCGGCGATGGCGCGCATTCGCGACTATGTCGGCTATGACCCGGTTTTTGATACCCTG
GCCGAGCTTGAAGCCTATCTGCGCAAGGTTCACGCCCCCTTTGGCCCGCTGAGCGATGGCCAATGGCGGACGATGGCCGA
GCATGGGCATTGGCGGATCGAGGGGGGGCGCTACAAGCTGGCGCGCGACCCGGCGATCGCCGTGCCGATCAAGGCCGCTC
CGCTGGCCGACGTTTCGCTGTGGCCGCTGTGGGATGCCATCACCTGTCCGGTGCTGGTGATTCGCGGCGCCGAGTCCGAC
CTGTTGACAGCCGAGACCGTGGCCGAGATGGCCGGTCGCGGGCCGGGCTGCACGGTGGTCGAAGTGGCCGGCGTCGGTCA
CGCCCCGGCGCTGCTGACGGCCGATCAGATCGCCCCGATCGTCGATTTTCTGGTGAAATGA

Upstream 100 bases:

>100_bases
CGGCGACAGCGCCGCCGGATCGGCCTTTGCCCGGTACCGTTCCGCCGGCGACCCCCGGGTCGTCCTTTCTCCGTGGCTTG
GGACCGTAAGTGAGAGACCG

Downstream 100 bases:

>100_bases
GGGGCGTTAAAAAACGGCCTTGATCCAGGCCGTTAACCAGAAAAGCCGCGATGGGGGATAAGGCGGTTCCGCCCCGTCCC
CCATCGCTCTCGAAAATCAG

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase Fold Family Protein; Esterase/Lipase/Thioesterase Family Protein; Hydrolase/Acyltransferase; D-(-)-3-Hydroxybutyrate Oligomer Hydrolase; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Cation Diffusion Facilitator Family Transporter; Hydrolase Alpha/Beta Fold Family Protein; Hydrolases Or Acyltransferases; Hydroxybutyrate-Dimer Hydrolase Protein; Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase / Acyltransferase; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTKPLLQLQDSVAVLRPEGFRHMAYVEWRGDHDAPPAFCVHGLTRNGRDFDALAQALAASRRVFCPDVLGRGRSDCLTDP
AGYANLAYAADMVTLIARGGGGAIDWVGTSMGGLIGMILAAMPGSPIRRLVLNDVGPFVPQAAMARIRDYVGYDPVFDTL
AELEAYLRKVHAPFGPLSDGQWRTMAEHGHWRIEGGRYKLARDPAIAVPIKAAPLADVSLWPLWDAITCPVLVIRGAESD
LLTAETVAEMAGRGPGCTVVEVAGVGHAPALLTADQIAPIVDFLVK

Sequences:

>Translated_286_residues
MTKPLLQLQDSVAVLRPEGFRHMAYVEWRGDHDAPPAFCVHGLTRNGRDFDALAQALAASRRVFCPDVLGRGRSDCLTDP
AGYANLAYAADMVTLIARGGGGAIDWVGTSMGGLIGMILAAMPGSPIRRLVLNDVGPFVPQAAMARIRDYVGYDPVFDTL
AELEAYLRKVHAPFGPLSDGQWRTMAEHGHWRIEGGRYKLARDPAIAVPIKAAPLADVSLWPLWDAITCPVLVIRGAESD
LLTAETVAEMAGRGPGCTVVEVAGVGHAPALLTADQIAPIVDFLVK
>Mature_285_residues
TKPLLQLQDSVAVLRPEGFRHMAYVEWRGDHDAPPAFCVHGLTRNGRDFDALAQALAASRRVFCPDVLGRGRSDCLTDPA
GYANLAYAADMVTLIARGGGGAIDWVGTSMGGLIGMILAAMPGSPIRRLVLNDVGPFVPQAAMARIRDYVGYDPVFDTLA
ELEAYLRKVHAPFGPLSDGQWRTMAEHGHWRIEGGRYKLARDPAIAVPIKAAPLADVSLWPLWDAITCPVLVIRGAESDL
LTAETVAEMAGRGPGCTVVEVAGVGHAPALLTADQIAPIVDFLVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30601; Mature: 30469

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPLLQLQDSVAVLRPEGFRHMAYVEWRGDHDAPPAFCVHGLTRNGRDFDALAQALAAS
CCCCHHHHHCCCEEECCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHC
RRVFCPDVLGRGRSDCLTDPAGYANLAYAADMVTLIARGGGGAIDWVGTSMGGLIGMILA
CCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH
AMPGSPIRRLVLNDVGPFVPQAAMARIRDYVGYDPVFDTLAELEAYLRKVHAPFGPLSDG
HCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
QWRTMAEHGHWRIEGGRYKLARDPAIAVPIKAAPLADVSLWPLWDAITCPVLVIRGAESD
CCHHHHHCCCEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHCCEEEEECCCCC
LLTAETVAEMAGRGPGCTVVEVAGVGHAPALLTADQIAPIVDFLVK
HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKPLLQLQDSVAVLRPEGFRHMAYVEWRGDHDAPPAFCVHGLTRNGRDFDALAQALAAS
CCCHHHHHCCCEEECCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHC
RRVFCPDVLGRGRSDCLTDPAGYANLAYAADMVTLIARGGGGAIDWVGTSMGGLIGMILA
CCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH
AMPGSPIRRLVLNDVGPFVPQAAMARIRDYVGYDPVFDTLAELEAYLRKVHAPFGPLSDG
HCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
QWRTMAEHGHWRIEGGRYKLARDPAIAVPIKAAPLADVSLWPLWDAITCPVLVIRGAESD
CCHHHHHCCCEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHCCEEEEECCCCC
LLTAETVAEMAGRGPGCTVVEVAGVGHAPALLTADQIAPIVDFLVK
HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA