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The map label for this gene is mcp4 [H]

Identifier: 83593137

GI number: 83593137

Start: 2095413

End: 2096729

Strand: Reverse

Name: mcp4 [H]

Synonym: Rru_A1802

Alternate gene names: 83593137

Gene position: 2096729-2095413 (Counterclockwise)

Preceding gene: 83593138

Following gene: 83593134

Centisome position: 48.17

GC content: 65.3

Gene sequence:

>1317_bases
ATGGGGACGTTTTTCTCAGCGGTTTTCAATGGCGCCTCGGCCCAGCAAAAAGACGATGCGGAGGTTCTGGCTTTGCTCAA
GACCCGTGCCGGGGTCGGGCTGTGGGATGTGAAATTGCACGGGTCCGATCCCCTGCATCCGCTCAGCGTCTGGCATTGGT
CGAGCGAGCTGCGCCGTCTGCTTGGTTTCACCGACGCCGCCGAGTTTCCCGATGTCGTGAAATCCTGGTCCGAGCGGCTT
CACCCCGATGATGTCGCCACGGCCCTGGGCGCCTTCACCAATTGCCTCTCCGGGCGGTCCGCCGTCAAAGACAGTTATGA
TGTTTCCTATCGTCTCAAAAGGAAGGACGGCGCCTATCACTGGTTCCGGGCGATGGGCGGCGTGAACCGGGATGGCGCGG
GCAAGGCGACGCGGATGTGCGGATCGCTGATCGATATCGACGCCGAGCGGGTGTCCGAGGCCAGACGCCGCGAGGATACC
CAGCGTTTTGCCGATAGCTTCGAGGCCCAGGTGATGGGGTTGGTTCAATCGGTTTCCGGCGCGTCGGGCGATTTGCAGAC
GACGGCGCGGTGGTTGTCCTCGGGGGCGGCCGAAGCGGCCGATCAGGCGGTAACCGTCGCCGCCGCCGCCGGACAGGCGA
CCTCGAACGTGGAGACCGTGGCCTCGGCCGCCGAAGAGCTTTCCGCCTCCGTCTCGGAAATCTCGCGTCAAATGGCGGAT
TCGGCCCGCATCTCGACGGCGGCCTCGGAAGAGGCGGCGCGCACCAACGCCATGGTCCAGGGCTTGGCCACCGCCGCCAA
TAAGATCGGCGAGGTGGTCAAGCTGATCAACGATATCGCCAGCCAGACCAATCTTCTGGCGCTCAACGCGACGATCGAGG
CGGCGCGGGCCGGCGAAGCGGGCAAGGGCTTCGCCGTGGTGGCCGGAGAGGTCAAGAACCTCGCCAATCAGACCGGCCGC
GCCACCGATGAGATCGGCCTGCAGATCGCCGCCGTTCAGGAGGAAACCCGCAAGACCGTCGAGGCGATCAAGGGAATAGC
CGCGACGATCGAGCAGGTTCGCGAGAATGCCTCCGGCATCGCCTCGGCGGTCGAGCAACAGGGGGCGGCGACCCGGGAAA
TCGCCCGCAACGTCGAACAAGCCGCGACCGGCACCCGGCAGGTCTCCCAAAATATCGACTCGATCAGCAACAACGCGACG
GAGGCGGTGAAGGGAGCGGGGCAGGTGCTGACCTCGGCCGACGGCCTTGCCACGTCGTCGCAAAACCTGCGCGACGCGGT
GACTCGCTTCCTGGCCGAGGTTCGTTCGACGACTTGA

Upstream 100 bases:

>100_bases
GGCGCCCGCAGAGGCGCCCTCCGCAGGGCTTGCGAATCCTGTGGAATAGTCATCGCTCCCCTGCCCTCGACCCTGCCGCA
ACACACAAAGGGACTTGATC

Downstream 100 bases:

>100_bases
CGCCTTCGATCGTCCGGGCGCGCTTTGAGGATCGACCCCGGCTCTGCTCACTCGGTCAGACTATTCCCGCGGTGTGAGGA
GGAGGCGTCGGTCCCGTTGA

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MGTFFSAVFNGASAQQKDDAEVLALLKTRAGVGLWDVKLHGSDPLHPLSVWHWSSELRRLLGFTDAAEFPDVVKSWSERL
HPDDVATALGAFTNCLSGRSAVKDSYDVSYRLKRKDGAYHWFRAMGGVNRDGAGKATRMCGSLIDIDAERVSEARRREDT
QRFADSFEAQVMGLVQSVSGASGDLQTTARWLSSGAAEAADQAVTVAAAAGQATSNVETVASAAEELSASVSEISRQMAD
SARISTAASEEAARTNAMVQGLATAANKIGEVVKLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKNLANQTGR
ATDEIGLQIAAVQEETRKTVEAIKGIAATIEQVRENASGIASAVEQQGAATREIARNVEQAATGTRQVSQNIDSISNNAT
EAVKGAGQVLTSADGLATSSQNLRDAVTRFLAEVRSTT

Sequences:

>Translated_438_residues
MGTFFSAVFNGASAQQKDDAEVLALLKTRAGVGLWDVKLHGSDPLHPLSVWHWSSELRRLLGFTDAAEFPDVVKSWSERL
HPDDVATALGAFTNCLSGRSAVKDSYDVSYRLKRKDGAYHWFRAMGGVNRDGAGKATRMCGSLIDIDAERVSEARRREDT
QRFADSFEAQVMGLVQSVSGASGDLQTTARWLSSGAAEAADQAVTVAAAAGQATSNVETVASAAEELSASVSEISRQMAD
SARISTAASEEAARTNAMVQGLATAANKIGEVVKLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKNLANQTGR
ATDEIGLQIAAVQEETRKTVEAIKGIAATIEQVRENASGIASAVEQQGAATREIARNVEQAATGTRQVSQNIDSISNNAT
EAVKGAGQVLTSADGLATSSQNLRDAVTRFLAEVRSTT
>Mature_437_residues
GTFFSAVFNGASAQQKDDAEVLALLKTRAGVGLWDVKLHGSDPLHPLSVWHWSSELRRLLGFTDAAEFPDVVKSWSERLH
PDDVATALGAFTNCLSGRSAVKDSYDVSYRLKRKDGAYHWFRAMGGVNRDGAGKATRMCGSLIDIDAERVSEARRREDTQ
RFADSFEAQVMGLVQSVSGASGDLQTTARWLSSGAAEAADQAVTVAAAAGQATSNVETVASAAEELSASVSEISRQMADS
ARISTAASEEAARTNAMVQGLATAANKIGEVVKLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKNLANQTGRA
TDEIGLQIAAVQEETRKTVEAIKGIAATIEQVRENASGIASAVEQQGAATREIARNVEQAATGTRQVSQNIDSISNNATE
AVKGAGQVLTSADGLATSSQNLRDAVTRFLAEVRSTT

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=254, Percent_Identity=30.7086614173228, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI2367378, Length=150, Percent_Identity=38.6666666666667, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1788195, Length=233, Percent_Identity=34.7639484978541, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1789453, Length=272, Percent_Identity=31.6176470588235, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787690, Length=116, Percent_Identity=41.3793103448276, Blast_Score=82, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 45988; Mature: 45857

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTFFSAVFNGASAQQKDDAEVLALLKTRAGVGLWDVKLHGSDPLHPLSVWHWSSELRRL
CCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
LGFTDAAEFPDVVKSWSERLHPDDVATALGAFTNCLSGRSAVKDSYDVSYRLKRKDGAYH
HCCCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEECCCCHHH
WFRAMGGVNRDGAGKATRMCGSLIDIDAERVSEARRREDTQRFADSFEAQVMGLVQSVSG
HHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASGDLQTTARWLSSGAAEAADQAVTVAAAAGQATSNVETVASAAEELSASVSEISRQMAD
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SARISTAASEEAARTNAMVQGLATAANKIGEVVKLINDIASQTNLLALNATIEAARAGEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHCCCC
GKGFAVVAGEVKNLANQTGRATDEIGLQIAAVQEETRKTVEAIKGIAATIEQVRENASGI
CCCCEEEHHHHHHHHHHCCCCHHHHCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASAVEQQGAATREIARNVEQAATGTRQVSQNIDSISNNATEAVKGAGQVLTSADGLATSS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCH
QNLRDAVTRFLAEVRSTT
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GTFFSAVFNGASAQQKDDAEVLALLKTRAGVGLWDVKLHGSDPLHPLSVWHWSSELRRL
CHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
LGFTDAAEFPDVVKSWSERLHPDDVATALGAFTNCLSGRSAVKDSYDVSYRLKRKDGAYH
HCCCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEECCCCHHH
WFRAMGGVNRDGAGKATRMCGSLIDIDAERVSEARRREDTQRFADSFEAQVMGLVQSVSG
HHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASGDLQTTARWLSSGAAEAADQAVTVAAAAGQATSNVETVASAAEELSASVSEISRQMAD
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SARISTAASEEAARTNAMVQGLATAANKIGEVVKLINDIASQTNLLALNATIEAARAGEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHCCCC
GKGFAVVAGEVKNLANQTGRATDEIGLQIAAVQEETRKTVEAIKGIAATIEQVRENASGI
CCCCEEEHHHHHHHHHHCCCCHHHHCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASAVEQQGAATREIARNVEQAATGTRQVSQNIDSISNNATEAVKGAGQVLTSADGLATSS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCH
QNLRDAVTRFLAEVRSTT
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]