| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593132
Identifier: 83593132
GI number: 83593132
Start: 2090813
End: 2091439
Strand: Reverse
Name: 83593132
Synonym: Rru_A1797
Alternate gene names: NA
Gene position: 2091439-2090813 (Counterclockwise)
Preceding gene: 83593133
Following gene: 83593131
Centisome position: 48.05
GC content: 66.67
Gene sequence:
>627_bases ATGGAGGACATCCTGGCCTCCATTCGGAAGATCCTCTCCGAAGACGAGGAAAAGGCCGAGGAGCGGGCCCCGGAACCGGA GCCCGAGCCCTTTGTCTTTCCCGAGCCGGAGCCCGAACCGGAGCCCGAACCCGATCTCGGCGCCTGGGGCCTGGAGGAGG ACGAGGAGGAACCCCTCGTGCTCGACCAGCCGGCCTTCGAACCCAAAGACGAGGTGCTGGAGTTGACCGAGGATATGTTC GTCGATGACGAACCGATCCCCGAACCCGAACCCGAACCGCCGCCGCCCCCTCCGCCACCCCCCCCTCCGCCGCCGCCACC CCCGCCACCCCCCCCTCCGGAACCGCCGCCCTTTGTCTCCGAGATCGAGGACGATCCGGTGGACGAGCGCCTGATTTCGG CGACGACCGAGGTGGCCGCCGGCGGCCTGCTCGCCGAACTGGCTTCGGCGGTCGCCCGCGAACGGACCATCGGCCTTGGG CATGGCGGCGTCACCCTTGAGGACATGGTGCGCGAGATCCTGCGCCAATTGCTCAAGGACTGGCTCGACGAGAATCTGCC CTATATGACCGAGCGGCTGGTTCAGAAGGAAATCGAGCGACTGGTCGATCGCGCTGAAAAACTTTGA
Upstream 100 bases:
>100_bases TTTACGCGCAGGCTTTTAAGCTGCACCCTACGAACGCAAACCGATCGGATCGGGCGAGTCCAGCACCATGAGCCAAGAGA ACGCGCAACAGGAACCGTCC
Downstream 100 bases:
>100_bases TTCCCCCCGATCAACCCCTATGATTGCCGGCCCTTCGGGGCCGGTTGCCGTTTCCGGGGCCGGTCGATCCGAGTCCAATG ATATTTTGACGTGAAGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MEDILASIRKILSEDEEKAEERAPEPEPEPFVFPEPEPEPEPEPDLGAWGLEEDEEEPLVLDQPAFEPKDEVLELTEDMF VDDEPIPEPEPEPPPPPPPPPPPPPPPPPPPPPEPPPFVSEIEDDPVDERLISATTEVAAGGLLAELASAVARERTIGLG HGGVTLEDMVREILRQLLKDWLDENLPYMTERLVQKEIERLVDRAEKL
Sequences:
>Translated_208_residues MEDILASIRKILSEDEEKAEERAPEPEPEPFVFPEPEPEPEPEPDLGAWGLEEDEEEPLVLDQPAFEPKDEVLELTEDMF VDDEPIPEPEPEPPPPPPPPPPPPPPPPPPPPPEPPPFVSEIEDDPVDERLISATTEVAAGGLLAELASAVARERTIGLG HGGVTLEDMVREILRQLLKDWLDENLPYMTERLVQKEIERLVDRAEKL >Mature_208_residues MEDILASIRKILSEDEEKAEERAPEPEPEPFVFPEPEPEPEPEPDLGAWGLEEDEEEPLVLDQPAFEPKDEVLELTEDMF VDDEPIPEPEPEPPPPPPPPPPPPPPPPPPPPPEPPPFVSEIEDDPVDERLISATTEVAAGGLLAELASAVARERTIGLG HGGVTLEDMVREILRQLLKDWLDENLPYMTERLVQKEIERLVDRAEKL
Specific function: Unknown
COG id: COG3827
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23212; Mature: 23212
Theoretical pI: Translated: 3.69; Mature: 3.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDILASIRKILSEDEEKAEERAPEPEPEPFVFPEPEPEPEPEPDLGAWGLEEDEEEPLV CHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEE LDQPAFEPKDEVLELTEDMFVDDEPIPEPEPEPPPPPPPPPPPPPPPPPPPPPEPPPFVS ECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH EIEDDPVDERLISATTEVAAGGLLAELASAVARERTIGLGHGGVTLEDMVREILRQLLKD HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH WLDENLPYMTERLVQKEIERLVDRAEKL HHHCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEDILASIRKILSEDEEKAEERAPEPEPEPFVFPEPEPEPEPEPDLGAWGLEEDEEEPLV CHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEE LDQPAFEPKDEVLELTEDMFVDDEPIPEPEPEPPPPPPPPPPPPPPPPPPPPPEPPPFVS ECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH EIEDDPVDERLISATTEVAAGGLLAELASAVARERTIGLGHGGVTLEDMVREILRQLLKD HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH WLDENLPYMTERLVQKEIERLVDRAEKL HHHCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA