| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593113
Identifier: 83593113
GI number: 83593113
Start: 2069010
End: 2070080
Strand: Reverse
Name: 83593113
Synonym: Rru_A1778
Alternate gene names: NA
Gene position: 2070080-2069010 (Counterclockwise)
Preceding gene: 83593114
Following gene: 83593112
Centisome position: 47.56
GC content: 69.28
Gene sequence:
>1071_bases ATGGTGATTAGGCGCCGACGTCCTGACGGTGGGGAAGACGACATCGATCTTGACGAGCAGCTGCTCAATCTTCTCCCTGA GGAACTCCGGGACTCCGACGATTATTACCTTGAGGACGAGGATGAGCCCCCGCGTGGGCGCGGCGGCATGTTCGCCATCA TCGGCGGCATTGCTTTTGGCGTGTTGGTCGCCGGTATCGCCGCCTGGTACCTGCTGGGCGGCGGATCGTCCGATACCGCC GGCACCCCCGCCGATCTTCCTTTGGTCAGCGCCGATCCGACGCCCTATAAGGCGCGGCCGGAAGAGCCGGGCGGCATGCA GGTCGAGAACCGCGACAAGCTGGTCTACAACCGGATCAGCGAGGACGAGGATCAGAAGACCGCCGACGCGACCACCGAAA AGCTGCTGCCCGATCCCGAGCAGCCGATGACGCCGCCCGTGGCGGTTCAGCCCGAGCCCGTGCCACAGCCGCAGGCCGTT TCGCCGGTGCCCGTGCAGCCGGTGCCGATGGAGCCCGTGCCATCCCCGGCGCCCGTCCAATCGGTGCAGCCGGTTCCGGT TCAGCCGGTGCCCATCCAGCCGGTCCCGGTTCAACCGGTCCCGGTTCAACCGGTGCCGACCCCGCCGGTTCAGGCCGCGC CGGTGCGCCCGGCTCCGCCGCCCGCCGTCGCCGCCGCGCCAAGCCAGCCGCGCGCCCCGGCGGCTGGTCAGCCGCAACCT TTGACCGCGCCGACGCCGGCGCCGGCCCGCCCGACGGCCAGCGCCCCGGCGGCCGCGGCCAATCAGACCGCCTCGCTGCC CACCATCCGTCCGGCCGCCGGCGGGACGGGGGTTGTCGTCCAGCTTGCCGCCCTGCGCTCGGCCGAAGCCGCCGAGGTCG CCTGGAAGGGGCTGGTCACCAAGCACCGCGACCTGTTGGGCTCGCTGACCCACGATGTGCAGAAGGCCGATCTCAAGGAA AAGGGCCTGTTCTTCCGCCTTCGCGCCGGTCCGGTATCGAGCGCGGCCGAAGCCAAATCCCTGTGTGACGCCCTTAAAAG CCGTAATCAGAGTTGTATCATTGTCCGTTAA
Upstream 100 bases:
>100_bases CCCGCAGTTTGGCACGACTCGCGCTTGTCCAGGCGGTGGCGTCGGTGATAGCGTCTGGTCTCGAAATCTTCGGAGTTGAA CCGGTAAAGGAGATGCGCTG
Downstream 100 bases:
>100_bases TCCCCCTCTGGCCGTTATTCTCGGCGTGTCCGGCCCCGCCCTTAGTCCGCGTGAAGTCGCTTTTTTCCGCGAGATCGATC CCTTCGGCTTCATCCTGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MVIRRRRPDGGEDDIDLDEQLLNLLPEELRDSDDYYLEDEDEPPRGRGGMFAIIGGIAFGVLVAGIAAWYLLGGGSSDTA GTPADLPLVSADPTPYKARPEEPGGMQVENRDKLVYNRISEDEDQKTADATTEKLLPDPEQPMTPPVAVQPEPVPQPQAV SPVPVQPVPMEPVPSPAPVQSVQPVPVQPVPIQPVPVQPVPVQPVPTPPVQAAPVRPAPPPAVAAAPSQPRAPAAGQPQP LTAPTPAPARPTASAPAAAANQTASLPTIRPAAGGTGVVVQLAALRSAEAAEVAWKGLVTKHRDLLGSLTHDVQKADLKE KGLFFRLRAGPVSSAAEAKSLCDALKSRNQSCIIVR
Sequences:
>Translated_356_residues MVIRRRRPDGGEDDIDLDEQLLNLLPEELRDSDDYYLEDEDEPPRGRGGMFAIIGGIAFGVLVAGIAAWYLLGGGSSDTA GTPADLPLVSADPTPYKARPEEPGGMQVENRDKLVYNRISEDEDQKTADATTEKLLPDPEQPMTPPVAVQPEPVPQPQAV SPVPVQPVPMEPVPSPAPVQSVQPVPVQPVPIQPVPVQPVPVQPVPTPPVQAAPVRPAPPPAVAAAPSQPRAPAAGQPQP LTAPTPAPARPTASAPAAAANQTASLPTIRPAAGGTGVVVQLAALRSAEAAEVAWKGLVTKHRDLLGSLTHDVQKADLKE KGLFFRLRAGPVSSAAEAKSLCDALKSRNQSCIIVR >Mature_356_residues MVIRRRRPDGGEDDIDLDEQLLNLLPEELRDSDDYYLEDEDEPPRGRGGMFAIIGGIAFGVLVAGIAAWYLLGGGSSDTA GTPADLPLVSADPTPYKARPEEPGGMQVENRDKLVYNRISEDEDQKTADATTEKLLPDPEQPMTPPVAVQPEPVPQPQAV SPVPVQPVPMEPVPSPAPVQSVQPVPVQPVPIQPVPVQPVPVQPVPTPPVQAAPVRPAPPPAVAAAPSQPRAPAAGQPQP LTAPTPAPARPTASAPAAAANQTASLPTIRPAAGGTGVVVQLAALRSAEAAEVAWKGLVTKHRDLLGSLTHDVQKADLKE KGLFFRLRAGPVSSAAEAKSLCDALKSRNQSCIIVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37297; Mature: 37297
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIRRRRPDGGEDDIDLDEQLLNLLPEELRDSDDYYLEDEDEPPRGRGGMFAIIGGIAFG CCCCCCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCEECCCCCCCCCCCCEEHHHHHHHHH VLVAGIAAWYLLGGGSSDTAGTPADLPLVSADPTPYKARPEEPGGMQVENRDKLVYNRIS HHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEECCCCHHHHHHCC EDEDQKTADATTEKLLPDPEQPMTPPVAVQPEPVPQPQAVSPVPVQPVPMEPVPSPAPVQ CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SVQPVPVQPVPIQPVPVQPVPVQPVPTPPVQAAPVRPAPPPAVAAAPSQPRAPAAGQPQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC LTAPTPAPARPTASAPAAAANQTASLPTIRPAAGGTGVVVQLAALRSAEAAEVAWKGLVT CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH KHRDLLGSLTHDVQKADLKEKGLFFRLRAGPVSSAAEAKSLCDALKSRNQSCIIVR HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure MVIRRRRPDGGEDDIDLDEQLLNLLPEELRDSDDYYLEDEDEPPRGRGGMFAIIGGIAFG CCCCCCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCEECCCCCCCCCCCCEEHHHHHHHHH VLVAGIAAWYLLGGGSSDTAGTPADLPLVSADPTPYKARPEEPGGMQVENRDKLVYNRIS HHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEECCCCHHHHHHCC EDEDQKTADATTEKLLPDPEQPMTPPVAVQPEPVPQPQAVSPVPVQPVPMEPVPSPAPVQ CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SVQPVPVQPVPIQPVPVQPVPVQPVPTPPVQAAPVRPAPPPAVAAAPSQPRAPAAGQPQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC LTAPTPAPARPTASAPAAAANQTASLPTIRPAAGGTGVVVQLAALRSAEAAEVAWKGLVT CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH KHRDLLGSLTHDVQKADLKEKGLFFRLRAGPVSSAAEAKSLCDALKSRNQSCIIVR HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA