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The map label for this gene is scpA [H]

Identifier: 83593110

GI number: 83593110

Start: 2066473

End: 2067285

Strand: Reverse

Name: scpA [H]

Synonym: Rru_A1775

Alternate gene names: 83593110

Gene position: 2067285-2066473 (Counterclockwise)

Preceding gene: 83593111

Following gene: 83593109

Centisome position: 47.49

GC content: 68.27

Gene sequence:

>813_bases
ATGGCCAGCGACGCCTTCCCAGAGGACCCCGCGCCCCCGGCGGCGGGGCGGAGCGCCGACGATCTGGTCCTCGATCTCGA
CGGCTTCGAGGGGCCGATCGACGTGCTGTTGACCCTGGCGCGCAGCCAGAAGGTCGATCTGACCAAGCTGTCGATCCTGC
GTCTGGCCGAGCAATATCTGGCCTTCGTCGCCCGCGCCCGCCAGATCCACCTGGAACTGGCCGGCGATTATCTGGTGATG
GCGGCATGGCTCGCCTATCTCAAGTCGCGGCTGCTGATCCCCGCGCCCAAAAACGAACAGGAGCCGAGCGGCGAGGATAT
GGCGGCGGCCTTGCAGTTCCACCTGCGCCGCCTGGAGGCCATGCAACGGGCCGGAACCACCCTGATGGCCCGGCCGCGCC
TGGGGCGCGATGTCTTCGCCCGCGGCGCGCCCGAAGGGGTGGCAATGGTCACCCGCACGGCCTATCAGGCGGGTTTGTAT
GACCTGCTCCGCGCCTATGGCAAGGTGCGCCTCAGCCTTGAGCCGCCCCCGGTTCTGGCGATCGAGGCCTTCACCCTGTA
TAGCGTCGAGAACGCCATTCGCCGTATTGGCGCCCTGCTCGGCGGCTTGGCCGATTGGACGCCGATCCGTAATTTTCTGC
CCCCGGGGTTGGAGGATCCGCTGGTCCGCCGCTCGGCGGTGGCGGCGACCTTCGTCGCCACCTTGGAACTGGCCAAGCAA
GGCGTTCTCGACCTGCGCCAAGACGGTGGGGTTTATGCGCCGATCACCGTGCGGCCGGTGGCGGCGGGCAACAGGACAGG
CGTGGCGCCATGA

Upstream 100 bases:

>100_bases
CGTTCTCGCGGATCATCGGCCCGGTGGTGCGCGCCCTGCTGGGCGCCGTCTACACCACGGCCGGCATCCCGCTGTTCTGA
GCGGGCGGGGCAGGGCCGTC

Downstream 100 bases:

>100_bases
AACCGGATATCGACACGACGCTCCCCTTTGCCGAGGACGGAGCCGATTTCGCCCTGATCCGCCTGATCGAGGCCCTGTTG
TTCGCCGCGCCCACCCCCTT

Product: condensin subunit ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MASDAFPEDPAPPAAGRSADDLVLDLDGFEGPIDVLLTLARSQKVDLTKLSILRLAEQYLAFVARARQIHLELAGDYLVM
AAWLAYLKSRLLIPAPKNEQEPSGEDMAAALQFHLRRLEAMQRAGTTLMARPRLGRDVFARGAPEGVAMVTRTAYQAGLY
DLLRAYGKVRLSLEPPPVLAIEAFTLYSVENAIRRIGALLGGLADWTPIRNFLPPGLEDPLVRRSAVAATFVATLELAKQ
GVLDLRQDGGVYAPITVRPVAAGNRTGVAP

Sequences:

>Translated_270_residues
MASDAFPEDPAPPAAGRSADDLVLDLDGFEGPIDVLLTLARSQKVDLTKLSILRLAEQYLAFVARARQIHLELAGDYLVM
AAWLAYLKSRLLIPAPKNEQEPSGEDMAAALQFHLRRLEAMQRAGTTLMARPRLGRDVFARGAPEGVAMVTRTAYQAGLY
DLLRAYGKVRLSLEPPPVLAIEAFTLYSVENAIRRIGALLGGLADWTPIRNFLPPGLEDPLVRRSAVAATFVATLELAKQ
GVLDLRQDGGVYAPITVRPVAAGNRTGVAP
>Mature_269_residues
ASDAFPEDPAPPAAGRSADDLVLDLDGFEGPIDVLLTLARSQKVDLTKLSILRLAEQYLAFVARARQIHLELAGDYLVMA
AWLAYLKSRLLIPAPKNEQEPSGEDMAAALQFHLRRLEAMQRAGTTLMARPRLGRDVFARGAPEGVAMVTRTAYQAGLYD
LLRAYGKVRLSLEPPPVLAIEAFTLYSVENAIRRIGALLGGLADWTPIRNFLPPGLEDPLVRRSAVAATFVATLELAKQG
VLDLRQDGGVYAPITVRPVAAGNRTGVAP

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 29205; Mature: 29074

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASDAFPEDPAPPAAGRSADDLVLDLDGFEGPIDVLLTLARSQKVDLTKLSILRLAEQYL
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AFVARARQIHLELAGDYLVMAAWLAYLKSRLLIPAPKNEQEPSGEDMAAALQFHLRRLEA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
MQRAGTTLMARPRLGRDVFARGAPEGVAMVTRTAYQAGLYDLLRAYGKVRLSLEPPPVLA
HHHCCCEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEE
IEAFTLYSVENAIRRIGALLGGLADWTPIRNFLPPGLEDPLVRRSAVAATFVATLELAKQ
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GVLDLRQDGGVYAPITVRPVAAGNRTGVAP
HHHHHHHCCCEECCEEEEEECCCCCCCCCC
>Mature Secondary Structure 
ASDAFPEDPAPPAAGRSADDLVLDLDGFEGPIDVLLTLARSQKVDLTKLSILRLAEQYL
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AFVARARQIHLELAGDYLVMAAWLAYLKSRLLIPAPKNEQEPSGEDMAAALQFHLRRLEA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
MQRAGTTLMARPRLGRDVFARGAPEGVAMVTRTAYQAGLYDLLRAYGKVRLSLEPPPVLA
HHHCCCEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEE
IEAFTLYSVENAIRRIGALLGGLADWTPIRNFLPPGLEDPLVRRSAVAATFVATLELAKQ
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GVLDLRQDGGVYAPITVRPVAAGNRTGVAP
HHHHHHHCCCEECCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]