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The map label for this gene is atoS [C]

Identifier: 83593014

GI number: 83593014

Start: 1969288

End: 1971570

Strand: Direct

Name: atoS [C]

Synonym: Rru_A1679

Alternate gene names: 83593014

Gene position: 1969288-1971570 (Clockwise)

Preceding gene: 83593013

Following gene: 83593015

Centisome position: 45.24

GC content: 64.65

Gene sequence:

>2283_bases
TTGTCCCCCACCAGCCAGCGGCGCGGCGGCCGTCCCGCCCTCAACCGCACCATCTTGCGCCTGGGTCTGTGGGCGCGGCG
GGTCAAGCTGTCGCGCCGCCTGGCCGTCGCCCTGGCCGTCGCCTCGTTGATCAGCGGCGGCGTCACCTTCTTTCTGCTGT
CAAGCCCCGAGCCCAGTTCGCGGGCGATCTGGATCCTGCTCAACGTCGATCTGGTGATCTTGCTGGCCCTGGGCGGGCTG
ATCACCCGTTCGGTGGTGCGCATGTGGTCAAGCCGGCGCTCCGGGGGGGCGGGGTCGCGGCTGCAGGTGCGGTTGGCCGT
GCTGTTTAGCGCCGTCGCCATCACCCCGGCGATCTTGCTCGCCATCTTCTCGACCATCGCCTTTCAGGTCAGCTTCCAAA
GCTGGTTCGACGAAAAGGTCTCGACCGCCGTTCGCGAATCCCAAGAGGTCGCCGAGGCCTATCTGCAGGCCCATATGAAC
GCCATCGCCGGCGATGCCGCCTTGACGGCCAATGACCTGAACCGGGAATGGCGGCGCATGCCCAATTCCCAGGTCCTCAA
CCAGTTTCTCACCACCCAATCCCTGGTGCGCAATCTGTCGGAGGTGGTGGTCTTCACCCGCGAGGGCAATGTTCTGGGCC
GGGCGGGCTATACCTTCTCGCTGCAGTTCGAGCAGGTTCCCAATTATCTGATCGATCAGGCCGATCTGGGCGAGGTGGTG
GTCATCCCCGGGCAGGGGAACGACCGGGTGCGCGCCCTGGTCGAACTGGGCACGCCGGGCACCTATCTTTACGTCGGGCG
CTTCGTCGATGCCGCCGTGCGCGACCATATCGAGAAGGCCCATGCGGCGGTCTCGGAGTATCTGGCCTTCCAGGCGCAAA
GCTCCAAGCTGCAGATCCTTTATTTCCTGACCTATATCGTCGTGTCGCTTTTGCTGCTGCTGGCGGCCATCTGGGTGGGC
ATCACCATCGCCAACCGGCTGGCCCAGCCGATCATGGATCTGATCGAAGCCGCCGGAAAGGTCAGCGAGGGCAATCTGTC
GGTCCGGGTTTCCGAACTGGTGGCCAGCGACGAGGTTGCCCTGCTTGGCCGCGCCTTCAATCGCATGACCATCCGCTTGG
AAAGCCAGCAAAAAAGCCTGTTGGCCGCCAATCTCGAACTCGACGAACGGCGGCGTTTCACCGAAACCGTGCTGGCCGGG
GTGTCCGCCGGGGTGATCGGCGTTGACGCCGAGGGCAAGATCAACCTGCCCAATCCCTCGGCCTGCGCGCTGTTTGATCG
CGACCTGACCCTGTGGCAGGGCCAGCCGATCGGCGCCCTTCTGGCCGAATTCGGCGAGGTGTTGACGGCGGTGCGCCAGC
GTCCCGACCGGCCGGTCGAACGCGAGATGGAGATCCGCATCGATCGCCGCCCGGTGACCTTGCTGGTGCGGGTGGCGGCG
GAATGCTCGGCCCAGGGGATCACTGGCTTCGTCTTCACCTTCGATGACATCACCGAATTGCAATCGGCCCAGCGCAAGGC
GGCCTGGGCCGATGTCGCCCGGCGCATCGCCCATGAGATCAAGAACCCGCTGACGCCGATCCAGCTTTCGGCCGAGCGCC
TGAAACGCAAATATCTCAAGCAGATCACCGACGATCCCGAGACCTTCGCCCGCTGCACGGAAACCATCATCCGCCATGTC
GGCGATATCGGCCAGATGGTCGACGAGTTCAGCGCCTTCGCCCGCATGCCCGCCCCGGAGATCCGCCCTTGCGATCTGGG
CGAATTGGTCCTTCAATCGGTGGTTCTTCAGCGCACGGCCTATGGCCAGATCGGCTTTTCCACCGAGCTGCCCGAGGGCA
AGGTGATCGTGGCCGCCGATGGCCGCCAGATCACCCAGGCCCTGACCAATCTTCTGAAGAACGCCGTCGAGGCCATTCAA
GGCCGCGATCGCCCGGCCGAGGGAGCGCCGCCCTTGCCAGCCGGGCGAATTGCCGTCAGCCTGACCCTGACAAACGATCA
GGCGGTGGTTCGCATCGTTGACAATGGCCGGGGGCTTCCCGACATGGAGACCAAGCGGCTGACCGAACCCTATGTTACCA
CGCGGGCCAAAGGGACCGGCCTTGGACTGGCCATCGTCAAGAAAATTCTGGAAGATCATGGCGGGGATCTGGTACTTGAA
AACGCTTCGGGCGGGGGGGCCGCCATTTCGCTGACACTCCCCCTCACTCCCGTGGTTCGCGCCGCCGACCCCGGGTTCGC
ATCCCAACCGCCCCTTCAGGCCGATCCAATCCATGGCGCATGA

Upstream 100 bases:

>100_bases
CAAGGCCGCCCAATTGCTCGGCCTCAACCGCAATACCCTGCGCAAGAAGATCCGGGATCTCGATATCCAGGTCGTGCGCG
GCGTCAAGGGCTAGGCCGCC

Downstream 100 bases:

>100_bases
CATTCTCATCGTCGATGACGAAGAAGACATCCGCATGATGCTCGCCGGCATCCTGGAGGACGAGGGCTACGACACCCGCG
TCGCCGTCGATGCCGACAGC

Product: multi-sensor Signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 760; Mature: 759

Protein sequence:

>760_residues
MSPTSQRRGGRPALNRTILRLGLWARRVKLSRRLAVALAVASLISGGVTFFLLSSPEPSSRAIWILLNVDLVILLALGGL
ITRSVVRMWSSRRSGGAGSRLQVRLAVLFSAVAITPAILLAIFSTIAFQVSFQSWFDEKVSTAVRESQEVAEAYLQAHMN
AIAGDAALTANDLNREWRRMPNSQVLNQFLTTQSLVRNLSEVVVFTREGNVLGRAGYTFSLQFEQVPNYLIDQADLGEVV
VIPGQGNDRVRALVELGTPGTYLYVGRFVDAAVRDHIEKAHAAVSEYLAFQAQSSKLQILYFLTYIVVSLLLLLAAIWVG
ITIANRLAQPIMDLIEAAGKVSEGNLSVRVSELVASDEVALLGRAFNRMTIRLESQQKSLLAANLELDERRRFTETVLAG
VSAGVIGVDAEGKINLPNPSACALFDRDLTLWQGQPIGALLAEFGEVLTAVRQRPDRPVEREMEIRIDRRPVTLLVRVAA
ECSAQGITGFVFTFDDITELQSAQRKAAWADVARRIAHEIKNPLTPIQLSAERLKRKYLKQITDDPETFARCTETIIRHV
GDIGQMVDEFSAFARMPAPEIRPCDLGELVLQSVVLQRTAYGQIGFSTELPEGKVIVAADGRQITQALTNLLKNAVEAIQ
GRDRPAEGAPPLPAGRIAVSLTLTNDQAVVRIVDNGRGLPDMETKRLTEPYVTTRAKGTGLGLAIVKKILEDHGGDLVLE
NASGGGAAISLTLPLTPVVRAADPGFASQPPLQADPIHGA

Sequences:

>Translated_760_residues
MSPTSQRRGGRPALNRTILRLGLWARRVKLSRRLAVALAVASLISGGVTFFLLSSPEPSSRAIWILLNVDLVILLALGGL
ITRSVVRMWSSRRSGGAGSRLQVRLAVLFSAVAITPAILLAIFSTIAFQVSFQSWFDEKVSTAVRESQEVAEAYLQAHMN
AIAGDAALTANDLNREWRRMPNSQVLNQFLTTQSLVRNLSEVVVFTREGNVLGRAGYTFSLQFEQVPNYLIDQADLGEVV
VIPGQGNDRVRALVELGTPGTYLYVGRFVDAAVRDHIEKAHAAVSEYLAFQAQSSKLQILYFLTYIVVSLLLLLAAIWVG
ITIANRLAQPIMDLIEAAGKVSEGNLSVRVSELVASDEVALLGRAFNRMTIRLESQQKSLLAANLELDERRRFTETVLAG
VSAGVIGVDAEGKINLPNPSACALFDRDLTLWQGQPIGALLAEFGEVLTAVRQRPDRPVEREMEIRIDRRPVTLLVRVAA
ECSAQGITGFVFTFDDITELQSAQRKAAWADVARRIAHEIKNPLTPIQLSAERLKRKYLKQITDDPETFARCTETIIRHV
GDIGQMVDEFSAFARMPAPEIRPCDLGELVLQSVVLQRTAYGQIGFSTELPEGKVIVAADGRQITQALTNLLKNAVEAIQ
GRDRPAEGAPPLPAGRIAVSLTLTNDQAVVRIVDNGRGLPDMETKRLTEPYVTTRAKGTGLGLAIVKKILEDHGGDLVLE
NASGGGAAISLTLPLTPVVRAADPGFASQPPLQADPIHGA
>Mature_759_residues
SPTSQRRGGRPALNRTILRLGLWARRVKLSRRLAVALAVASLISGGVTFFLLSSPEPSSRAIWILLNVDLVILLALGGLI
TRSVVRMWSSRRSGGAGSRLQVRLAVLFSAVAITPAILLAIFSTIAFQVSFQSWFDEKVSTAVRESQEVAEAYLQAHMNA
IAGDAALTANDLNREWRRMPNSQVLNQFLTTQSLVRNLSEVVVFTREGNVLGRAGYTFSLQFEQVPNYLIDQADLGEVVV
IPGQGNDRVRALVELGTPGTYLYVGRFVDAAVRDHIEKAHAAVSEYLAFQAQSSKLQILYFLTYIVVSLLLLLAAIWVGI
TIANRLAQPIMDLIEAAGKVSEGNLSVRVSELVASDEVALLGRAFNRMTIRLESQQKSLLAANLELDERRRFTETVLAGV
SAGVIGVDAEGKINLPNPSACALFDRDLTLWQGQPIGALLAEFGEVLTAVRQRPDRPVEREMEIRIDRRPVTLLVRVAAE
CSAQGITGFVFTFDDITELQSAQRKAAWADVARRIAHEIKNPLTPIQLSAERLKRKYLKQITDDPETFARCTETIIRHVG
DIGQMVDEFSAFARMPAPEIRPCDLGELVLQSVVLQRTAYGQIGFSTELPEGKVIVAADGRQITQALTNLLKNAVEAIQG
RDRPAEGAPPLPAGRIAVSLTLTNDQAVVRIVDNGRGLPDMETKRLTEPYVTTRAKGTGLGLAIVKKILEDHGGDLVLEN
ASGGGAAISLTLPLTPVVRAADPGFASQPPLQADPIHGA

Specific function: Member of the two-component regulatory system ntrY/ntrX involved in nitrogen level control. Probably activates ntrX by phosphorylation [H]

COG id: COG5000

COG function: function code T; Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=364, Percent_Identity=27.4725274725275, Blast_Score=126, Evalue=4e-30,
Organism=Escherichia coli, GI1790436, Length=244, Percent_Identity=27.0491803278689, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1790300, Length=356, Percent_Identity=26.123595505618, Blast_Score=77, Evalue=5e-15,
Organism=Escherichia coli, GI1789808, Length=232, Percent_Identity=26.2931034482759, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1790567, Length=347, Percent_Identity=24.7838616714697, Blast_Score=68, Evalue=3e-12,
Organism=Escherichia coli, GI1788713, Length=278, Percent_Identity=28.7769784172662, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1790861, Length=225, Percent_Identity=27.1111111111111, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR017232 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 82649; Mature: 82518

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTSQRRGGRPALNRTILRLGLWARRVKLSRRLAVALAVASLISGGVTFFLLSSPEPSS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
RAIWILLNVDLVILLALGGLITRSVVRMWSSRRSGGAGSRLQVRLAVLFSAVAITPAILL
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AIFSTIAFQVSFQSWFDEKVSTAVRESQEVAEAYLQAHMNAIAGDAALTANDLNREWRRM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHC
PNSQVLNQFLTTQSLVRNLSEVVVFTREGNVLGRAGYTFSLQFEQVPNYLIDQADLGEVV
CCHHHHHHHHHHHHHHHHHHHHEEEEECCCEEECCCCEEEEEHHHCCHHHCCCCCCCCEE
VIPGQGNDRVRALVELGTPGTYLYVGRFVDAAVRDHIEKAHAAVSEYLAFQAQSSKLQIL
EEECCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YFLTYIVVSLLLLLAAIWVGITIANRLAQPIMDLIEAAGKVSEGNLSVRVSELVASDEVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCHHH
LLGRAFNRMTIRLESQQKSLLAANLELDERRRFTETVLAGVSAGVIGVDAEGKINLPNPS
HHHHHHCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEECCCCCC
ACALFDRDLTLWQGQPIGALLAEFGEVLTAVRQRPDRPVEREMEIRIDRRPVTLLVRVAA
EEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCHHHHHHHHH
ECSAQGITGFVFTFDDITELQSAQRKAAWADVARRIAHEIKNPLTPIQLSAERLKRKYLK
HHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QITDDPETFARCTETIIRHVGDIGQMVDEFSAFARMPAPEIRPCDLGELVLQSVVLQRTA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
YGQIGFSTELPEGKVIVAADGRQITQALTNLLKNAVEAIQGRDRPAEGAPPLPAGRIAVS
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
LTLTNDQAVVRIVDNGRGLPDMETKRLTEPYVTTRAKGTGLGLAIVKKILEDHGGDLVLE
EEEECCCEEEEEEECCCCCCCCHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCEEEE
NASGGGAAISLTLPLTPVVRAADPGFASQPPLQADPIHGA
CCCCCCEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPTSQRRGGRPALNRTILRLGLWARRVKLSRRLAVALAVASLISGGVTFFLLSSPEPSS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
RAIWILLNVDLVILLALGGLITRSVVRMWSSRRSGGAGSRLQVRLAVLFSAVAITPAILL
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AIFSTIAFQVSFQSWFDEKVSTAVRESQEVAEAYLQAHMNAIAGDAALTANDLNREWRRM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHC
PNSQVLNQFLTTQSLVRNLSEVVVFTREGNVLGRAGYTFSLQFEQVPNYLIDQADLGEVV
CCHHHHHHHHHHHHHHHHHHHHEEEEECCCEEECCCCEEEEEHHHCCHHHCCCCCCCCEE
VIPGQGNDRVRALVELGTPGTYLYVGRFVDAAVRDHIEKAHAAVSEYLAFQAQSSKLQIL
EEECCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YFLTYIVVSLLLLLAAIWVGITIANRLAQPIMDLIEAAGKVSEGNLSVRVSELVASDEVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCHHH
LLGRAFNRMTIRLESQQKSLLAANLELDERRRFTETVLAGVSAGVIGVDAEGKINLPNPS
HHHHHHCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEECCCCCC
ACALFDRDLTLWQGQPIGALLAEFGEVLTAVRQRPDRPVEREMEIRIDRRPVTLLVRVAA
EEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCHHHHHHHHH
ECSAQGITGFVFTFDDITELQSAQRKAAWADVARRIAHEIKNPLTPIQLSAERLKRKYLK
HHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QITDDPETFARCTETIIRHVGDIGQMVDEFSAFARMPAPEIRPCDLGELVLQSVVLQRTA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
YGQIGFSTELPEGKVIVAADGRQITQALTNLLKNAVEAIQGRDRPAEGAPPLPAGRIAVS
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
LTLTNDQAVVRIVDNGRGLPDMETKRLTEPYVTTRAKGTGLGLAIVKKILEDHGGDLVLE
EEEECCCEEEEEEECCCCCCCCHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCEEEE
NASGGGAAISLTLPLTPVVRAADPGFASQPPLQADPIHGA
CCCCCCEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7553451 [H]