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The map label for this gene is glnL [C]

Identifier: 83593012

GI number: 83593012

Start: 1966637

End: 1967737

Strand: Direct

Name: glnL [C]

Synonym: Rru_A1677

Alternate gene names: 83593012

Gene position: 1966637-1967737 (Clockwise)

Preceding gene: 83593011

Following gene: 83593013

Centisome position: 45.18

GC content: 63.4

Gene sequence:

>1101_bases
ATGGTGAAGATTTCTGCCCTGACCCGGCGCGCGCCGGTTCCCTCGATCGACCCGGCGACGGTGCTGAGCGCCATCGCTTC
GGCGGTGATCTGTGTCGACGAGGCCGACCGGGTGCAATTCGTCAATGCCGCCGGCGAGCAGATGTTCGAAAGCACCTGGG
CGCTGTTGCGCGGCATGGCGCTCTCGGACCTGATTCCGCCCGATTGTCCGATCTTTGGATTGATGGAAAAGGTTCGGCGC
AATCATTCGACTTTTTCGGAATACGGGGTGCAGCTTGATACCCCGCGCACCGGCCAGCGCACCATCACCGTGCGCGTGTC
GCCTTTGGCCGAATACGAGAACTGGGTGGTGATCTCGCTCCATGAACTGTCGATGGCCTTGAAGATCGGCCAGCAGATGA
GCCACCGCAACGCCGCCCGCTCGGTGACGGCAATGGCCGCCCTGCTTGCCCATGAGGTCAAGAACCCGCTGTCGGGGATT
CGCGGGGCGGCCCAGCTTCTGGAAGCCAATCTGCCCGAAGAGGACCACCAGCTGGTCCGGCTGATCATCGACGAGACCGA
CCGCATCGTTGCCCTGGTCGACCGCATGGAGGTTTTCTCCGACAACATGCCGCTGGCCCGCGAGGCGGTGAACATCCACC
GGGTTCTCGAGCATGTGCGCATGGTCGCCGAAAACGGCTTCGCCCGCGGTGTCCGCTTCGTCGAGACCTATGATCCGTCC
TTGCCCGCCGTTTTGGGCAGCCGCGACCAGTTGATCCAGGTGTTCCTCAATCTGATCAAGAACGCCGCCGAGGCGATCGG
CCCGGGCGGCGGCGAGATCGTGCTGTCGACCGCCTATCAGCAGGGCCTGAGATTACGGGTGCCGGGCGGCGAGGTGACCG
ATTTGCCGCTGGTCATCAGCGTGCGCGACAATGGTACCACCGGTATCTCGGAAGATCTGCGCGGCAATCTGTTCGATCCC
TTCGTCACCACCAAGCCCAAGGGCAGTGGTCTGGGGCTGCCGCTGGTGGCCAAGATCGTCAACGATCACGGCGGCATCAT
CGAATTCGACAGCGTTCCCGGCCGCACGGTGTTCACCGTCATGCTGCCGATGGTCCGCTGA

Upstream 100 bases:

>100_bases
CGCCGTCCGCATCCCAAGAAAGCCGCCAAAGAGCGGTCTTGAAAAACCCCACCCCGGAGGACACGTCACCCGACCGCCCG
CGAGAAGAGGCCGCTTGAAG

Downstream 100 bases:

>100_bases
CGCCCAAGATCCCCGCCGACGCCGGCCAGCTCCGCGTCGGGCGCCCCCTTTGACATGTCTTCGGGCATGGGTTGAAATGA
GTAAAGGAACCTTTTGAGAT

Product: signal transduction histidine kinase, nitrogen specific, NtrB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MVKISALTRRAPVPSIDPATVLSAIASAVICVDEADRVQFVNAAGEQMFESTWALLRGMALSDLIPPDCPIFGLMEKVRR
NHSTFSEYGVQLDTPRTGQRTITVRVSPLAEYENWVVISLHELSMALKIGQQMSHRNAARSVTAMAALLAHEVKNPLSGI
RGAAQLLEANLPEEDHQLVRLIIDETDRIVALVDRMEVFSDNMPLAREAVNIHRVLEHVRMVAENGFARGVRFVETYDPS
LPAVLGSRDQLIQVFLNLIKNAAEAIGPGGGEIVLSTAYQQGLRLRVPGGEVTDLPLVISVRDNGTTGISEDLRGNLFDP
FVTTKPKGSGLGLPLVAKIVNDHGGIIEFDSVPGRTVFTVMLPMVR

Sequences:

>Translated_366_residues
MVKISALTRRAPVPSIDPATVLSAIASAVICVDEADRVQFVNAAGEQMFESTWALLRGMALSDLIPPDCPIFGLMEKVRR
NHSTFSEYGVQLDTPRTGQRTITVRVSPLAEYENWVVISLHELSMALKIGQQMSHRNAARSVTAMAALLAHEVKNPLSGI
RGAAQLLEANLPEEDHQLVRLIIDETDRIVALVDRMEVFSDNMPLAREAVNIHRVLEHVRMVAENGFARGVRFVETYDPS
LPAVLGSRDQLIQVFLNLIKNAAEAIGPGGGEIVLSTAYQQGLRLRVPGGEVTDLPLVISVRDNGTTGISEDLRGNLFDP
FVTTKPKGSGLGLPLVAKIVNDHGGIIEFDSVPGRTVFTVMLPMVR
>Mature_366_residues
MVKISALTRRAPVPSIDPATVLSAIASAVICVDEADRVQFVNAAGEQMFESTWALLRGMALSDLIPPDCPIFGLMEKVRR
NHSTFSEYGVQLDTPRTGQRTITVRVSPLAEYENWVVISLHELSMALKIGQQMSHRNAARSVTAMAALLAHEVKNPLSGI
RGAAQLLEANLPEEDHQLVRLIIDETDRIVALVDRMEVFSDNMPLAREAVNIHRVLEHVRMVAENGFARGVRFVETYDPS
LPAVLGSRDQLIQVFLNLIKNAAEAIGPGGGEIVLSTAYQQGLRLRVPGGEVTDLPLVISVRDNGTTGISEDLRGNLFDP
FVTTKPKGSGLGLPLVAKIVNDHGGIIEFDSVPGRTVFTVMLPMVR

Specific function: NtrB acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC. In nitrogen limitation ntrB activates ntrC by phosphorylating it, while in nitrogen excess ntrC is dephosphorylated and consequently inactiva

COG id: COG3852

COG function: function code T; Signal transduction histidine kinase, nitrogen specific

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1790300, Length=359, Percent_Identity=33.7047353760446, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1790436, Length=237, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1788549, Length=251, Percent_Identity=29.8804780876494, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1788393, Length=278, Percent_Identity=27.6978417266187, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1789149, Length=274, Percent_Identity=24.8175182481752, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 39866; Mature: 39866

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKISALTRRAPVPSIDPATVLSAIASAVICVDEADRVQFVNAAGEQMFESTWALLRGMA
CEEECCHHHCCCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCH
LSDLIPPDCPIFGLMEKVRRNHSTFSEYGVQLDTPRTGQRTITVRVSPLAEYENWVVISL
HHHCCCCCCCHHHHHHHHHHCCCCHHHCCEEECCCCCCCEEEEEEEEECCCCCCEEEEEH
HELSMALKIGQQMSHRNAARSVTAMAALLAHEVKNPLSGIRGAAQLLEANLPEEDHQLVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LIIDETDRIVALVDRMEVFSDNMPLAREAVNIHRVLEHVRMVAENGFARGVRFVETYDPS
HHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEECCCC
LPAVLGSRDQLIQVFLNLIKNAAEAIGPGGGEIVLSTAYQQGLRLRVPGGEVTDLPLVIS
CCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCEEECCCCCEECCEEEEE
VRDNGTTGISEDLRGNLFDPFVTTKPKGSGLGLPLVAKIVNDHGGIIEFDSVPGRTVFTV
EECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEHHH
MLPMVR
HHHHCC
>Mature Secondary Structure
MVKISALTRRAPVPSIDPATVLSAIASAVICVDEADRVQFVNAAGEQMFESTWALLRGMA
CEEECCHHHCCCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCH
LSDLIPPDCPIFGLMEKVRRNHSTFSEYGVQLDTPRTGQRTITVRVSPLAEYENWVVISL
HHHCCCCCCCHHHHHHHHHHCCCCHHHCCEEECCCCCCCEEEEEEEEECCCCCCEEEEEH
HELSMALKIGQQMSHRNAARSVTAMAALLAHEVKNPLSGIRGAAQLLEANLPEEDHQLVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LIIDETDRIVALVDRMEVFSDNMPLAREAVNIHRVLEHVRMVAENGFARGVRFVETYDPS
HHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEECCCC
LPAVLGSRDQLIQVFLNLIKNAAEAIGPGGGEIVLSTAYQQGLRLRVPGGEVTDLPLVIS
CCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCEEECCCCCEECCEEEEE
VRDNGTTGISEDLRGNLFDPFVTTKPKGSGLGLPLVAKIVNDHGGIIEFDSVPGRTVFTV
EECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEHHH
MLPMVR
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7553451 [H]