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The map label for this gene is tsf

Identifier: 83592922

GI number: 83592922

Start: 1871368

End: 1872297

Strand: Direct

Name: tsf

Synonym: Rru_A1587

Alternate gene names: 83592922

Gene position: 1871368-1872297 (Clockwise)

Preceding gene: 83592921

Following gene: 83592923

Centisome position: 42.99

GC content: 66.45

Gene sequence:

>930_bases
ATGGCCGAGATCACCGCCGCCCTCGTCAAGAGCCTGCGCGAGCAGACCGGCGCAGGCATGATGGATTGCAAGAAGGCCCT
GACCGAAACCGCGGGTGACGTGGAAGCCGCCATCGACTGGCTGCGCAAGAAGGGCCTCGCCGCCGCCGCCAAGAAGGCCG
GGCGCACCGCCTCGGAAGGTCTGGTCGGCATCGCCACCGCCGGCACCGCCGGCGCCGTCGTCGAAGTCAACGCCGAGACC
GATTTCGTCGCCCGCAACGATACCTTCCAGGGCTTCGTCGAAACCGTCGCCTCGCTGACCCTGGCGGCCAAGGGCGATAT
CGAAGCGCTGAAGTCCGCCGCCTATCCCGGTGGCGAAGGGCGCACCGTCGAGGCCCAGGTGACCCATCTGATCGCCACCA
TCGGCGAGAACATGCAGCTGCGCCGCAGCGCCGCGCTTGAGGTCGAGCAGGGCGTCGTCACCAGCTACATGCACACCGCC
GTCAAGCCCGGTCTGGGCAAGATCGGCGTGCTCGTCGCCCTCAAGTCGGCGGCCGATCCGGCCAAGCTCGACGAATTGGG
CCGTCAGATCGCCATGCATGTCGCCGCCGCCCAGCCGCGCTACGCCTTCATTTCCGAAGTCGACGCCGAAGCCCTCGATC
GCGAGCGCTCGGTGCTGAGCGAGCAGGCCAAGGCCTCGGGCAAGCCCGACGCCATCATCGAGAAGATGGTCGAAGGCCGC
CTGCGCAAGTTCTACGAGGAAGTGGTCCTGACCGAGCAGATCTTCGTTATCGATGGCGAGACCAAGATCGCCAAGGTCCT
GGAGAAGGCCGGCAAGGATCTGGGCGCGCCGATCGAGCTGGGTGGCTTCGTCCGCTTCCAGCTTGGCGAGGGCATCGAGA
AGGAAGAGAGCGATTTCGCCGCCGAGGTCGCCGCTCAGCTGAAGAAGTAA

Upstream 100 bases:

>100_bases
TCATCGTCGCCCTCCTTCCAGCCGTTCCCGGCCCCTGCGCCGTACCCGAGGGAAGGGCGTCCGCCCTAACGAAGCACTGA
TTTCCAAGAGAGGACTCCCC

Downstream 100 bases:

>100_bases
GGCACTTTCGCCCATAAAGCGTCAAACGCCTGTTGGCCGCCGGGTTCGGGTCTCTTATGATCCGGCCCGGCGGTCGTCTG
TTCCCGCCTGGGGTCTCGTA

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MAEITAALVKSLREQTGAGMMDCKKALTETAGDVEAAIDWLRKKGLAAAAKKAGRTASEGLVGIATAGTAGAVVEVNAET
DFVARNDTFQGFVETVASLTLAAKGDIEALKSAAYPGGEGRTVEAQVTHLIATIGENMQLRRSAALEVEQGVVTSYMHTA
VKPGLGKIGVLVALKSAADPAKLDELGRQIAMHVAAAQPRYAFISEVDAEALDRERSVLSEQAKASGKPDAIIEKMVEGR
LRKFYEEVVLTEQIFVIDGETKIAKVLEKAGKDLGAPIELGGFVRFQLGEGIEKEESDFAAEVAAQLKK

Sequences:

>Translated_309_residues
MAEITAALVKSLREQTGAGMMDCKKALTETAGDVEAAIDWLRKKGLAAAAKKAGRTASEGLVGIATAGTAGAVVEVNAET
DFVARNDTFQGFVETVASLTLAAKGDIEALKSAAYPGGEGRTVEAQVTHLIATIGENMQLRRSAALEVEQGVVTSYMHTA
VKPGLGKIGVLVALKSAADPAKLDELGRQIAMHVAAAQPRYAFISEVDAEALDRERSVLSEQAKASGKPDAIIEKMVEGR
LRKFYEEVVLTEQIFVIDGETKIAKVLEKAGKDLGAPIELGGFVRFQLGEGIEKEESDFAAEVAAQLKK
>Mature_308_residues
AEITAALVKSLREQTGAGMMDCKKALTETAGDVEAAIDWLRKKGLAAAAKKAGRTASEGLVGIATAGTAGAVVEVNAETD
FVARNDTFQGFVETVASLTLAAKGDIEALKSAAYPGGEGRTVEAQVTHLIATIGENMQLRRSAALEVEQGVVTSYMHTAV
KPGLGKIGVLVALKSAADPAKLDELGRQIAMHVAAAQPRYAFISEVDAEALDRERSVLSEQAKASGKPDAIIEKMVEGRL
RKFYEEVVLTEQIFVIDGETKIAKVLEKAGKDLGAPIELGGFVRFQLGEGIEKEESDFAAEVAAQLKK

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI171846268, Length=217, Percent_Identity=35.9447004608295, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI291084500, Length=238, Percent_Identity=33.1932773109244, Blast_Score=111, Evalue=9e-25,
Organism=Homo sapiens, GI291084502, Length=94, Percent_Identity=45.7446808510638, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI291084498, Length=94, Percent_Identity=45.7446808510638, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI1786366, Length=310, Percent_Identity=47.4193548387097, Blast_Score=240, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI17561440, Length=301, Percent_Identity=26.578073089701, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI19921466, Length=310, Percent_Identity=29.0322580645161, Blast_Score=108, Evalue=4e-24,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_RHORT (Q2RU08)

Other databases:

- EMBL:   CP000230
- RefSeq:   YP_426674.1
- ProteinModelPortal:   Q2RU08
- SMR:   Q2RU08
- STRING:   Q2RU08
- GeneID:   3835004
- GenomeReviews:   CP000230_GR
- KEGG:   rru:Rru_A1587
- NMPDR:   fig|1085.1.peg.2780
- eggNOG:   COG0264
- HOGENOM:   HBG713289
- OMA:   YLHGTRI
- PhylomeDB:   Q2RU08
- ProtClustDB:   PRK09377
- BioCyc:   RRUB269796:RRU_A1587-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 32600; Mature: 32468

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEITAALVKSLREQTGAGMMDCKKALTETAGDVEAAIDWLRKKGLAAAAKKAGRTASEG
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHCCCCHHCC
LVGIATAGTAGAVVEVNAETDFVARNDTFQGFVETVASLTLAAKGDIEALKSAAYPGGEG
CEEEEECCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
RTVEAQVTHLIATIGENMQLRRSAALEVEQGVVTSYMHTAVKPGLGKIGVLVALKSAADP
CEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCCCCH
AKLDELGRQIAMHVAAAQPRYAFISEVDAEALDRERSVLSEQAKASGKPDAIIEKMVEGR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LRKFYEEVVLTEQIFVIDGETKIAKVLEKAGKDLGAPIELGGFVRFQLGEGIEKEESDFA
HHHHHHHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCEECCCEEEEECCCCCCHHHHHHH
AEVAAQLKK
HHHHHHHCC
>Mature Secondary Structure 
AEITAALVKSLREQTGAGMMDCKKALTETAGDVEAAIDWLRKKGLAAAAKKAGRTASEG
CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHCCCCHHCC
LVGIATAGTAGAVVEVNAETDFVARNDTFQGFVETVASLTLAAKGDIEALKSAAYPGGEG
CEEEEECCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
RTVEAQVTHLIATIGENMQLRRSAALEVEQGVVTSYMHTAVKPGLGKIGVLVALKSAADP
CEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCCCCH
AKLDELGRQIAMHVAAAQPRYAFISEVDAEALDRERSVLSEQAKASGKPDAIIEKMVEGR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LRKFYEEVVLTEQIFVIDGETKIAKVLEKAGKDLGAPIELGGFVRFQLGEGIEKEESDFA
HHHHHHHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCEECCCEEEEECCCCCCHHHHHHH
AEVAAQLKK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA