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The map label for this gene is exoF [H]

Identifier: 83592823

GI number: 83592823

Start: 1755894

End: 1756475

Strand: Reverse

Name: exoF [H]

Synonym: Rru_A1487

Alternate gene names: 83592823

Gene position: 1756475-1755894 (Counterclockwise)

Preceding gene: 83592828

Following gene: 83592822

Centisome position: 40.35

GC content: 65.29

Gene sequence:

>582_bases
ATGACCTTGTCCAAGTCCCTCTGCACCACCCTTGTCGTCGCGGCCAGCCTGGGACTCGCCGCCTGCGCCGGCCCTTCCCT
GCCCGACCGCGAGGCGCCGCGCGCCATCGCCAACGTCAAGGATGGCAATCTCCTGGTGCCGGGCAATCACATCCGCATCA
CCGTTTTCAACGAGCCCAATCTGTCGGGTGAATTCATCATCGACAGCACCGGCAATCTGGCGATGCCGCTGATCGGCGAC
ATCACGGCGGCCGGCGTGACCACCCAGGCGCTGGCCGGCAGAATAGCCGATAAAATTCGTGGGGAAAACTATCTACGCGA
CCCCCGGGTCACCGTCGAATCCTCCAGCCTGCGCCCGGTTTACGTGATGGGCGAGGTTCGCGGGCCGGGCGAGTTCCTGT
ATATCGACGGCATGACGGTGCTGAGCGCCATCGCCCGGGCCGGCGGCTATGATTACCGGGCGCGCGAAGGGCAAGTGCTG
CTGATTCGCCAGGAGGACGGCAAGCCGGTGGACTATCGCGCCGAGGAATATACCCCGGTGCAGCCGGGCGATATCGTCCG
GGTGCTCGAGCGGCGCTTCTAG

Upstream 100 bases:

>100_bases
CATTAACAGAAAGACAACCAAATCCGCTCATAAAAAGAGAAACCGACCCAGCAGCGACTGTGAGCCCTTGCACTTTTTAC
TCGATTCTATCGGAGCTCCG

Downstream 100 bases:

>100_bases
GACGGCGCCCGCCATGGCCCCGCCCCTCCCCTCGCCCATGGATGGCTGCGTTCTGGTGACCGGCGGCGCCGGTTTCATCG
GCAGTCGGGTTGTCGCCGGA

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTLSKSLCTTLVVAASLGLAACAGPSLPDREAPRAIANVKDGNLLVPGNHIRITVFNEPNLSGEFIIDSTGNLAMPLIGD
ITAAGVTTQALAGRIADKIRGENYLRDPRVTVESSSLRPVYVMGEVRGPGEFLYIDGMTVLSAIARAGGYDYRAREGQVL
LIRQEDGKPVDYRAEEYTPVQPGDIVRVLERRF

Sequences:

>Translated_193_residues
MTLSKSLCTTLVVAASLGLAACAGPSLPDREAPRAIANVKDGNLLVPGNHIRITVFNEPNLSGEFIIDSTGNLAMPLIGD
ITAAGVTTQALAGRIADKIRGENYLRDPRVTVESSSLRPVYVMGEVRGPGEFLYIDGMTVLSAIARAGGYDYRAREGQVL
LIRQEDGKPVDYRAEEYTPVQPGDIVRVLERRF
>Mature_192_residues
TLSKSLCTTLVVAASLGLAACAGPSLPDREAPRAIANVKDGNLLVPGNHIRITVFNEPNLSGEFIIDSTGNLAMPLIGDI
TAAGVTTQALAGRIADKIRGENYLRDPRVTVESSSLRPVYVMGEVRGPGEFLYIDGMTVLSAIARAGGYDYRAREGQVLL
IRQEDGKPVDYRAEEYTPVQPGDIVRVLERRF

Specific function: Involved in succinoglycan (EPS I) synthesis. Needed for the addition of the first sugar (galactose) to the isoprenoid carrier [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 20801; Mature: 20670

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSKSLCTTLVVAASLGLAACAGPSLPDREAPRAIANVKDGNLLVPGNHIRITVFNEPN
CCCCHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHCCCCCCEEECCCEEEEEEECCCC
LSGEFIIDSTGNLAMPLIGDITAAGVTTQALAGRIADKIRGENYLRDPRVTVESSSLRPV
CCCEEEEECCCCEECCHHCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEE
YVMGEVRGPGEFLYIDGMTVLSAIARAGGYDYRAREGQVLLIRQEDGKPVDYRAEEYTPV
EEEEECCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
QPGDIVRVLERRF
CCHHHHHHHHHCC
>Mature Secondary Structure 
TLSKSLCTTLVVAASLGLAACAGPSLPDREAPRAIANVKDGNLLVPGNHIRITVFNEPN
CCCHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHCCCCCCEEECCCEEEEEEECCCC
LSGEFIIDSTGNLAMPLIGDITAAGVTTQALAGRIADKIRGENYLRDPRVTVESSSLRPV
CCCEEEEECCCCEECCHHCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEE
YVMGEVRGPGEFLYIDGMTVLSAIARAGGYDYRAREGQVLLIRQEDGKPVDYRAEEYTPV
EEEEECCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
QPGDIVRVLERRF
CCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8439670; 11481431 [H]