| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592821
Identifier: 83592821
GI number: 83592821
Start: 1753437
End: 1754894
Strand: Reverse
Name: 83592821
Synonym: Rru_A1485
Alternate gene names: NA
Gene position: 1754894-1753437 (Counterclockwise)
Preceding gene: 83592822
Following gene: 83592820
Centisome position: 40.32
GC content: 69.82
Gene sequence:
>1458_bases ATGAGGCTCGGCCGGCGCGCCCTGCTCGTGGCCGGTCTGGCGGGATGGCTGGGGGCCTGCGCCGGCCGGCCGGCGGCGGG CGCGATCGTCACCCCCCGTGACTTCGGCGCCCGGGGCGACGGCCAGGAGGATGACGCCGCCGCCTTTCAAGCCGCCATCG ACAGCGAAGCGCCGATTCTCCACGTTCCCCCGGGGCGTTATCGCATCGGCCGCCCCCTGGTGCCGCGCTCCAACCAGCAC TGGCGCGGCGACGGCGCCCAGGTCTCGGTGCTGGCCCAGCCCGCCGACGATGTCCCGCCGCCCTTCAATCTGATCGAACG CCACGACCGCCTGGAAAACGTCAGCTTCAGCGGCCTGGGCTTCCTGGGCAATGCCGCCCGTCAGACCACGGCCGCCGCCG ACGGCCAGCACGGCTTCGCCCTGTCTTTGCGCGGCGCCATCCGCGCGCTGGCCCTGACCGATTGCCACATCTCGGGCTTT GGCGATGGCGCGAATGGCGGCGGCGGGGTGGTGATCGGTCCGGCGCCCGACAGCCCTCTCCAGGCCTTGGAAGACATCAC CCTGCGCGGATGCCGCTTCGAGGCCAACGGCAATGTTCCCGGGGTTTATCTAAGCGGCGGCGACAAGATCGGCGCGCGGC GCGGCGCTATCCGCGTCATCGACAATCATTTCACCGGTATTGCCAACAGCGGGCGGGCGCAGAACTGCGTTTACATCCTG GGCGGCGGACCGCAAACGCGGATCGAGGGGGTTATCATCGAAGGCAACAGCTTCGCCCTCGCCACGCCGGTCGACGCCTG CATCGAACTGAACTGGGCCGAGGCCTTCACCATCACCGCCAACACCATCGTTTTCGACGACGCCCTTGACGGCTCCTCGG CGATTTTGCTGCGCGACGGCTGCAAGACCGGCAGCGTCAGCGCCAATACCCTGAGCGATCGCACCCCGGGTCGCGAGGTC GGCGGCATCTTGCTGCTGAATTTCGCCGATCCGGGAACGGTCGAGGACATCGTGCTCGCCGCCAACAGCCTCAGCGGCTT TTCCTGGCGGGCCGTGGCGATCGATCGTGGCAGCCGGGGAATCGTCGTGACCGGCAACCGCATCAGCGGCGGCGGTCGAA CCACGAAGGAGGCGATCCGCGTCGCCGGCGCCCGCACCGTGCTGATCGAGGGCAATGTCATCAGCGGCGCCCGCTTTCCC GTGCTGCTCGCCGGCCAGGGATCGGCCGCCGTCGGCGATATCAGCATCCTTGGCAATTTTCTGGCCGATTGCGGCGGCGA ACCGGGGTTGATCGACGCCTCGGCCGCTCCCGATCTGCGGGGGCTGGTGATCGGCGATACCACCATCACCGCCCCCCGCC CGGGCACCCGGGCCCTGCTCAGCGGCCTTGCCCACCCCCAGCAGGCCGTGATCACCGGCAGGCGAGGCGCCGGGCTGACG GCGGTGGAACGCCGATGA
Upstream 100 bases:
>100_bases CGGAACGGGCCTGGCGGCGCCTGGGGTGGCGGGTGCGCCGGCCGGTGGACAGCGCCTTGGCCGAGATCGCCGCCGCCGAC GGCCGCTTCGCCCTGGTATC
Downstream 100 bases:
>100_bases GCGGCTATCACCTTGACCGGCCGCGCCGCGCTTGCCGGTTGTGTGGCGCCACCGTCAACCAGCGGGTAGTGGGCCGCGAG CGCACCCTTGATCTCGGCCA
Product: parallel beta-helix repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MRLGRRALLVAGLAGWLGACAGRPAAGAIVTPRDFGARGDGQEDDAAAFQAAIDSEAPILHVPPGRYRIGRPLVPRSNQH WRGDGAQVSVLAQPADDVPPPFNLIERHDRLENVSFSGLGFLGNAARQTTAAADGQHGFALSLRGAIRALALTDCHISGF GDGANGGGGVVIGPAPDSPLQALEDITLRGCRFEANGNVPGVYLSGGDKIGARRGAIRVIDNHFTGIANSGRAQNCVYIL GGGPQTRIEGVIIEGNSFALATPVDACIELNWAEAFTITANTIVFDDALDGSSAILLRDGCKTGSVSANTLSDRTPGREV GGILLLNFADPGTVEDIVLAANSLSGFSWRAVAIDRGSRGIVVTGNRISGGGRTTKEAIRVAGARTVLIEGNVISGARFP VLLAGQGSAAVGDISILGNFLADCGGEPGLIDASAAPDLRGLVIGDTTITAPRPGTRALLSGLAHPQQAVITGRRGAGLT AVERR
Sequences:
>Translated_485_residues MRLGRRALLVAGLAGWLGACAGRPAAGAIVTPRDFGARGDGQEDDAAAFQAAIDSEAPILHVPPGRYRIGRPLVPRSNQH WRGDGAQVSVLAQPADDVPPPFNLIERHDRLENVSFSGLGFLGNAARQTTAAADGQHGFALSLRGAIRALALTDCHISGF GDGANGGGGVVIGPAPDSPLQALEDITLRGCRFEANGNVPGVYLSGGDKIGARRGAIRVIDNHFTGIANSGRAQNCVYIL GGGPQTRIEGVIIEGNSFALATPVDACIELNWAEAFTITANTIVFDDALDGSSAILLRDGCKTGSVSANTLSDRTPGREV GGILLLNFADPGTVEDIVLAANSLSGFSWRAVAIDRGSRGIVVTGNRISGGGRTTKEAIRVAGARTVLIEGNVISGARFP VLLAGQGSAAVGDISILGNFLADCGGEPGLIDASAAPDLRGLVIGDTTITAPRPGTRALLSGLAHPQQAVITGRRGAGLT AVERR >Mature_485_residues MRLGRRALLVAGLAGWLGACAGRPAAGAIVTPRDFGARGDGQEDDAAAFQAAIDSEAPILHVPPGRYRIGRPLVPRSNQH WRGDGAQVSVLAQPADDVPPPFNLIERHDRLENVSFSGLGFLGNAARQTTAAADGQHGFALSLRGAIRALALTDCHISGF GDGANGGGGVVIGPAPDSPLQALEDITLRGCRFEANGNVPGVYLSGGDKIGARRGAIRVIDNHFTGIANSGRAQNCVYIL GGGPQTRIEGVIIEGNSFALATPVDACIELNWAEAFTITANTIVFDDALDGSSAILLRDGCKTGSVSANTLSDRTPGREV GGILLLNFADPGTVEDIVLAANSLSGFSWRAVAIDRGSRGIVVTGNRISGGGRTTKEAIRVAGARTVLIEGNVISGARFP VLLAGQGSAAVGDISILGNFLADCGGEPGLIDASAAPDLRGLVIGDTTITAPRPGTRALLSGLAHPQQAVITGRRGAGLT AVERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49692; Mature: 49692
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGRRALLVAGLAGWLGACAGRPAAGAIVTPRDFGARGDGQEDDAAAFQAAIDSEAPIL CCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEE HVPPGRYRIGRPLVPRSNQHWRGDGAQVSVLAQPADDVPPPFNLIERHDRLENVSFSGLG ECCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC FLGNAARQTTAAADGQHGFALSLRGAIRALALTDCHISGFGDGANGGGGVVIGPAPDSPL CCCCCHHHHHHCCCCCCCEEEEECHHEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCHH QALEDITLRGCRFEANGNVPGVYLSGGDKIGARRGAIRVIDNHFTGIANSGRAQNCVYIL HHHHHHHEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE GGGPQTRIEGVIIEGNSFALATPVDACIELNWAEAFTITANTIVFDDALDGSSAILLRDG CCCCCCEEEEEEEECCCEEEECCCCCEEEECCCEEEEEEEEEEEEECCCCCCCEEEEECC CKTGSVSANTLSDRTPGREVGGILLLNFADPGTVEDIVLAANSLSGFSWRAVAIDRGSRG CCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCHHEEEEEECCCCCCEEEEEEEECCCCE IVVTGNRISGGGRTTKEAIRVAGARTVLIEGNVISGARFPVLLAGQGSAAVGDISILGNF EEEECCEECCCCCCHHHHHHHCCCEEEEEECCEECCCCCCEEEECCCCCCCCHHHHHHHH LADCGGEPGLIDASAAPDLRGLVIGDTTITAPRPGTRALLSGLAHPQQAVITGRRGAGLT HHHCCCCCCEEECCCCCCCCEEEEECEEEECCCCCHHHHHHHCCCCCCEEEECCCCCCCC AVERR CCCCC >Mature Secondary Structure MRLGRRALLVAGLAGWLGACAGRPAAGAIVTPRDFGARGDGQEDDAAAFQAAIDSEAPIL CCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEE HVPPGRYRIGRPLVPRSNQHWRGDGAQVSVLAQPADDVPPPFNLIERHDRLENVSFSGLG ECCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC FLGNAARQTTAAADGQHGFALSLRGAIRALALTDCHISGFGDGANGGGGVVIGPAPDSPL CCCCCHHHHHHCCCCCCCEEEEECHHEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCHH QALEDITLRGCRFEANGNVPGVYLSGGDKIGARRGAIRVIDNHFTGIANSGRAQNCVYIL HHHHHHHEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE GGGPQTRIEGVIIEGNSFALATPVDACIELNWAEAFTITANTIVFDDALDGSSAILLRDG CCCCCCEEEEEEEECCCEEEECCCCCEEEECCCEEEEEEEEEEEEECCCCCCCEEEEECC CKTGSVSANTLSDRTPGREVGGILLLNFADPGTVEDIVLAANSLSGFSWRAVAIDRGSRG CCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCHHEEEEEECCCCCCEEEEEEEECCCCE IVVTGNRISGGGRTTKEAIRVAGARTVLIEGNVISGARFPVLLAGQGSAAVGDISILGNF EEEECCEECCCCCCHHHHHHHCCCEEEEEECCEECCCCCCEEEECCCCCCCCHHHHHHHH LADCGGEPGLIDASAAPDLRGLVIGDTTITAPRPGTRALLSGLAHPQQAVITGRRGAGLT HHHCCCCCCEEECCCCCCCCEEEEECEEEECCCCCHHHHHHHCCCCCCEEEECCCCCCCC AVERR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA