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The map label for this gene is citN [H]

Identifier: 83592811

GI number: 83592811

Start: 1740717

End: 1742018

Strand: Reverse

Name: citN [H]

Synonym: Rru_A1475

Alternate gene names: 83592811

Gene position: 1742018-1740717 (Counterclockwise)

Preceding gene: 83592819

Following gene: 83592810

Centisome position: 40.02

GC content: 63.82

Gene sequence:

>1302_bases
ATGTTAGCACTTCTCGGACTGGCTACGATTCTTGCGCTTCTCGTAGCCATCATGACCAACAAGCTTTCCCCCCTGGTCGC
CTTGATCATCATTCCCGTGGCCGCTTCGCTGATCGGCGGCTTCGGGGTCGAGACGACCAAATTCATCGTCTCGGGCATCA
AGGACATCGCCCCGGTGGCGGCGATGTTCGTCTTCGCCATCGTCTTCTTCGGCATCGTCACCGACGCCGGGATGATGGAC
CCGATCATCGATCGCATCTTGCGCTTCGTCGGCTTGCGGCCGACGCGCATCGTCATGGGATCGGCGCTGCTCGCCCTGAT
CATCCACCTTGACGGTTCGGGCGCCGTGACCTTCCTGGTCACCATTCCGGCGATGCTGCCGCTGTTTGATCGCCTTGGCA
TGGACAAGCGCATCCTCGCCCTGGTGGTGTCCCTGGCCGCCGGCGTCAACTTCCTGCCGTGGACCGGCCCGGTCCTGCGC
GCCTCCGCCGCGCTCAAGGTTCCGGTCACCGATATTTTCAGCCCGCTGGTGTTTGTCCAGCTGGTCGGCTTGGTCTTCGT
CTTCAGTGTCGCCTATGTCCTTGGCAAGCGTGAAGAAAAGCGCCTTGGCCTGACCGGCGCCAAGGGTGAGAGCGCGGATA
TCCACGCCCGTGTCCTCAGCGCCGAAGAGGAAAAGGTCCGTCGCCCCCATCTGTTCTGGGCCAATATCGCCCTGACCGCC
GTGATCCTTGGCACCATGATCTCGGGCGTCGTCGATGCCTCGGTCATGTTCATGATCGGCACCGTTCTCGCCCTGATCCT
CAACTACCCCGGGGTCAAGGACCAGAAGGCCCGCGTCGACGCCCACGCCAAGGCCGCCTTGATGATGGCCAGCATCCTGT
TCGCCGCCGGCGCCTTCACCGGCATCATGCGCGGCACCGGCATGCTGACCGCCATGGCCACCTCGGCCGCCGGCTTCGTT
CCCGCCGAATTCGCCAGCCACATGCCGTTTGCCGTCGGTATCGCCTCGATGCCGCTCAGCATGCTGTTCGACCCGGACTC
CTATTACTTCGGCGTCATGCCGGTGATCGCCCACGTCTACCAGAGCTTCGGTGGCGCCCCCATCGAGATCGCCCAGGCGT
CGATCCTTGGCCAGATGACCACCGGGTTCCCGGTCAGCCCGCTGACCCCCGCCACCTTCCTGGTGGTCGGCCTCTGCGGC
ATCTCGCTGGGCGAGCATCAGAAGTTCGCCATCCCCTACCTGTTCGCGGCCACGGTTCTGATGACCGTCACGGCGGCGCT
GATCGGGGTTTTCCCCTTCTAA

Upstream 100 bases:

>100_bases
CTTCCACTTTGCCTAACGCTTTTCATGGTGGACGATAACGAATCCCAGATCAGCACCTGCGATAAGCTGGGCGAGTGGGA
TCCTTCAGGTGAGGTCGCCA

Downstream 100 bases:

>100_bases
GGATTGGCCTGCGCCTTCCCCACCTTTCTTAAGCCGACAAGACCCAGGAGTACCTTTTATGAAAACCATCCGCATCGGTT
CCGGCGCCGGCTATTCCGGT

Product: citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MLALLGLATILALLVAIMTNKLSPLVALIIIPVAASLIGGFGVETTKFIVSGIKDIAPVAAMFVFAIVFFGIVTDAGMMD
PIIDRILRFVGLRPTRIVMGSALLALIIHLDGSGAVTFLVTIPAMLPLFDRLGMDKRILALVVSLAAGVNFLPWTGPVLR
ASAALKVPVTDIFSPLVFVQLVGLVFVFSVAYVLGKREEKRLGLTGAKGESADIHARVLSAEEEKVRRPHLFWANIALTA
VILGTMISGVVDASVMFMIGTVLALILNYPGVKDQKARVDAHAKAALMMASILFAAGAFTGIMRGTGMLTAMATSAAGFV
PAEFASHMPFAVGIASMPLSMLFDPDSYYFGVMPVIAHVYQSFGGAPIEIAQASILGQMTTGFPVSPLTPATFLVVGLCG
ISLGEHQKFAIPYLFAATVLMTVTAALIGVFPF

Sequences:

>Translated_433_residues
MLALLGLATILALLVAIMTNKLSPLVALIIIPVAASLIGGFGVETTKFIVSGIKDIAPVAAMFVFAIVFFGIVTDAGMMD
PIIDRILRFVGLRPTRIVMGSALLALIIHLDGSGAVTFLVTIPAMLPLFDRLGMDKRILALVVSLAAGVNFLPWTGPVLR
ASAALKVPVTDIFSPLVFVQLVGLVFVFSVAYVLGKREEKRLGLTGAKGESADIHARVLSAEEEKVRRPHLFWANIALTA
VILGTMISGVVDASVMFMIGTVLALILNYPGVKDQKARVDAHAKAALMMASILFAAGAFTGIMRGTGMLTAMATSAAGFV
PAEFASHMPFAVGIASMPLSMLFDPDSYYFGVMPVIAHVYQSFGGAPIEIAQASILGQMTTGFPVSPLTPATFLVVGLCG
ISLGEHQKFAIPYLFAATVLMTVTAALIGVFPF
>Mature_433_residues
MLALLGLATILALLVAIMTNKLSPLVALIIIPVAASLIGGFGVETTKFIVSGIKDIAPVAAMFVFAIVFFGIVTDAGMMD
PIIDRILRFVGLRPTRIVMGSALLALIIHLDGSGAVTFLVTIPAMLPLFDRLGMDKRILALVVSLAAGVNFLPWTGPVLR
ASAALKVPVTDIFSPLVFVQLVGLVFVFSVAYVLGKREEKRLGLTGAKGESADIHARVLSAEEEKVRRPHLFWANIALTA
VILGTMISGVVDASVMFMIGTVLALILNYPGVKDQKARVDAHAKAALMMASILFAAGAFTGIMRGTGMLTAMATSAAGFV
PAEFASHMPFAVGIASMPLSMLFDPDSYYFGVMPVIAHVYQSFGGAPIEIAQASILGQMTTGFPVSPLTPATFLVVGLCG
ISLGEHQKFAIPYLFAATVLMTVTAALIGVFPF

Specific function: Transports the free citrate anion. Probably cotransports citrate and at least three or four protons. The citrate uptake is inhibited by the presence of magnesium ions [H]

COG id: COG2851

COG function: function code C; H+/citrate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014738
- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 45569; Mature: 45569

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS01319 RBFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALLGLATILALLVAIMTNKLSPLVALIIIPVAASLIGGFGVETTKFIVSGIKDIAPVA
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AMFVFAIVFFGIVTDAGMMDPIIDRILRFVGLRPTRIVMGSALLALIIHLDGSGAVTFLV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCEEHHH
TIPAMLPLFDRLGMDKRILALVVSLAAGVNFLPWTGPVLRASAALKVPVTDIFSPLVFVQ
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEECCHHHHHHHHHHHH
LVGLVFVFSVAYVLGKREEKRLGLTGAKGESADIHARVLSAEEEKVRRPHLFWANIALTA
HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHCCCHHHHCCCCHHHHHHHHHH
VILGTMISGVVDASVMFMIGTVLALILNYPGVKDQKARVDAHAKAALMMASILFAAGAFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GIMRGTGMLTAMATSAAGFVPAEFASHMPFAVGIASMPLSMLFDPDSYYFGVMPVIAHVY
HHHHCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHCCHHHEECCCCHHHHHHHHHHHHH
QSFGGAPIEIAQASILGQMTTGFPVSPLTPATFLVVGLCGISLGEHQKFAIPYLFAATVL
HHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
MTVTAALIGVFPF
HHHHHHHHHHCCC
>Mature Secondary Structure
MLALLGLATILALLVAIMTNKLSPLVALIIIPVAASLIGGFGVETTKFIVSGIKDIAPVA
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AMFVFAIVFFGIVTDAGMMDPIIDRILRFVGLRPTRIVMGSALLALIIHLDGSGAVTFLV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCEEHHH
TIPAMLPLFDRLGMDKRILALVVSLAAGVNFLPWTGPVLRASAALKVPVTDIFSPLVFVQ
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEECCHHHHHHHHHHHH
LVGLVFVFSVAYVLGKREEKRLGLTGAKGESADIHARVLSAEEEKVRRPHLFWANIALTA
HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHCCCHHHHCCCCHHHHHHHHHH
VILGTMISGVVDASVMFMIGTVLALILNYPGVKDQKARVDAHAKAALMMASILFAAGAFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GIMRGTGMLTAMATSAAGFVPAEFASHMPFAVGIASMPLSMLFDPDSYYFGVMPVIAHVY
HHHHCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHCCHHHEECCCCHHHHHHHHHHHHH
QSFGGAPIEIAQASILGQMTTGFPVSPLTPATFLVVGLCGISLGEHQKFAIPYLFAATVL
HHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
MTVTAALIGVFPF
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377; 7704256; 8892821 [H]