Click here to switch to the map view.

The map label for this gene is yciF [H]

Identifier: 83592782

GI number: 83592782

Start: 1710983

End: 1711480

Strand: Direct

Name: yciF [H]

Synonym: Rru_A1446

Alternate gene names: 83592782

Gene position: 1710983-1711480 (Clockwise)

Preceding gene: 83592781

Following gene: 83592787

Centisome position: 39.31

GC content: 59.84

Gene sequence:

>498_bases
ATGGCTGAGAAGACCCTGGATAAGCTTTTCTATGACACCCTCAAGGATATTTATTATGCCGAGAGGAAGATCCTGAAGGC
GTTGCCGAAGATGGCGCGGGGCGCCGATTCGGCGGAACTGCGGGCCGCCTTCGAAAAACACCATCAGGAAACCGAAGGGC
AGATCGAACGCCTTCAAATGGCCTTCGAATTGTTCGGCAAGCGCGCCCAGGGCAAAACCTGCGACGCGATCGAAGGCATC
CTGAGCGAGGGCGAGGAAATCCTTGACGCGTTCAAGGGCGAGCCGGCGGTCGATGCCGGTCTGATCGCCTCGGCCCAGGC
GGTCGAGCATTACGAGATCGCCCGCTATGGCACGCTCAAGCGCTGGGCCGAGGTGCTCGGCATGCCCGAGATCGCCAAGC
TTCTTGACCAGACGCTTCAAGAAGAGATCAAGACCGACGCCGATCTGACCAAGCTGGCCGATAAAGTCGCCAATTCGGCG
GCCCTGAAGGCGGCCTGA

Upstream 100 bases:

>100_bases
AAGAACCTCGGAACGAAGCGGGCGTCGACTCGTTAGAGGGGCTGTCGGCCAAGCCGGCAAGGCCTTTAACAGTCTTTGCA
AGATGAGAAGGACGCCTCCC

Downstream 100 bases:

>100_bases
TCGCGCTGTGCCGCGTGATCGATGATCGATGAAAACACCGCCCCCGCGAAGCGCCGACAAGGCGCTTTCGGGGGCGGTGC
CGTGACCGCCTTCCGCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MAEKTLDKLFYDTLKDIYYAERKILKALPKMARGADSAELRAAFEKHHQETEGQIERLQMAFELFGKRAQGKTCDAIEGI
LSEGEEILDAFKGEPAVDAGLIASAQAVEHYEIARYGTLKRWAEVLGMPEIAKLLDQTLQEEIKTDADLTKLADKVANSA
ALKAA

Sequences:

>Translated_165_residues
MAEKTLDKLFYDTLKDIYYAERKILKALPKMARGADSAELRAAFEKHHQETEGQIERLQMAFELFGKRAQGKTCDAIEGI
LSEGEEILDAFKGEPAVDAGLIASAQAVEHYEIARYGTLKRWAEVLGMPEIAKLLDQTLQEEIKTDADLTKLADKVANSA
ALKAA
>Mature_164_residues
AEKTLDKLFYDTLKDIYYAERKILKALPKMARGADSAELRAAFEKHHQETEGQIERLQMAFELFGKRAQGKTCDAIEGIL
SEGEEILDAFKGEPAVDAGLIASAQAVEHYEIARYGTLKRWAEVLGMPEIAKLLDQTLQEEIKTDADLTKLADKVANSAA
LKAA

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=165, Percent_Identity=44.2424242424242, Blast_Score=122, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 18286; Mature: 18155

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKTLDKLFYDTLKDIYYAERKILKALPKMARGADSAELRAAFEKHHQETEGQIERLQM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AFELFGKRAQGKTCDAIEGILSEGEEILDAFKGEPAVDAGLIASAQAVEHYEIARYGTLK
HHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RWAEVLGMPEIAKLLDQTLQEEIKTDADLTKLADKVANSAALKAA
HHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AEKTLDKLFYDTLKDIYYAERKILKALPKMARGADSAELRAAFEKHHQETEGQIERLQM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AFELFGKRAQGKTCDAIEGILSEGEEILDAFKGEPAVDAGLIASAQAVEHYEIARYGTLK
HHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RWAEVLGMPEIAKLLDQTLQEEIKTDADLTKLADKVANSAALKAA
HHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]