| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is fecR [H]
Identifier: 83592775
GI number: 83592775
Start: 1701705
End: 1702691
Strand: Direct
Name: fecR [H]
Synonym: Rru_A1439
Alternate gene names: 83592775
Gene position: 1701705-1702691 (Clockwise)
Preceding gene: 83592774
Following gene: 83592776
Centisome position: 39.09
GC content: 70.62
Gene sequence:
>987_bases ATGGCAGGCGAAGGTGGCGGGCCCGGAGACGGGGCCCTTCCGGAAAAATTTTTGAAGCAGGCGGCGATCTGGCATGCCCG CCTGCGTGAGGACGACCGCCACCGCAAGGCCTTCGCGCTGTGGCTTGGCGAGGATCCCCGCAAGGCCGAGGCCTTTCGCC AGACCGAGCGGCTGTGGGCGGCCCTTGAAGCGCCGACCGCCGCCCTGGCCACCGACGGCGCGGCCCTGATGGTCCGCCGC CAAAGGCGTCCGCCGATCATCTGGCGCCGCTCGGCCGGGCGACGGGTCGCTTTGGCGGTGGTCCTCGCCCTCGGGCTGGT CCTGGCCCCTCGCGGCCAAGGGCTGATCGATAGCCTGCGCGCCGATGACGTGACCGCCCCCGGGGAACGCCGATCCCTGG TGTTGGCCGACGGCAGCGTCGTCGCCCTGAATACCGACAGCGCCCTGGCCGTGGCGATGGGCGGCGATCACCGCCGGCTG AGGCTGTTTCGCGGCGAGGCGTGGTTCGAGGTCGCCCATGACGCGCGCCGACCCTTCGTCGTCGAAACCGGCGACGGCAC GGTCACGGTGACGGGCACCCGCTTCAATCTGCGCATCGACGAGGCCGGCACCCGGGTCAGCCTGAGCGAGGGACGGGTCG AGCTGAGCCCCGCCCACGCCGCCGGCCAGGTCAAAATCCTGCGACCGGGCGAACAGGCGGTGGTGGGCAAAACCGCCGTG GGGGCGATCGACACCTTCGACGCCACGGCGGTGACCGGCTGGCGGCGCGGGCAGATCGTTTTCTATGACACGGCCTTGCG ACAGGTGGTGGCCGAGCTTAACCGCTATCGCCGGGGCCCGATCCTTCTGGCACGACGGGATCTGGCCGATCTGCGGGTCA GCGGCGTGTTCGATGTCAGCGATCCCGAGGGGGTCTTGGCCGCCCTGACCGGCACCTTGCCCGTTCGCATGACCAAGGTG GGCGGGCTTTTGGTTGTGCTGCGCTGA
Upstream 100 bases:
>100_bases CATGATCGACGCCGGACGAAGCCCCTGAGAAAACAAATCCACCCGGTGGGGTAGGGGATCGGGGGGTGCCGATCGTCTTG GAGGAAGGGGGCGAAGAGAA
Downstream 100 bases:
>100_bases CCTTCGGCGATGAAACCCACCGGTTCCCCATAAAAATCATCGCGGGCGAGGGGGGATGATCGCCGCTGGCTTCGTCTCAC CCGCAGATGCGATTGCGGAG
Product: putative FecR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MAGEGGGPGDGALPEKFLKQAAIWHARLREDDRHRKAFALWLGEDPRKAEAFRQTERLWAALEAPTAALATDGAALMVRR QRRPPIIWRRSAGRRVALAVVLALGLVLAPRGQGLIDSLRADDVTAPGERRSLVLADGSVVALNTDSALAVAMGGDHRRL RLFRGEAWFEVAHDARRPFVVETGDGTVTVTGTRFNLRIDEAGTRVSLSEGRVELSPAHAAGQVKILRPGEQAVVGKTAV GAIDTFDATAVTGWRRGQIVFYDTALRQVVAELNRYRRGPILLARRDLADLRVSGVFDVSDPEGVLAALTGTLPVRMTKV GGLLVVLR
Sequences:
>Translated_328_residues MAGEGGGPGDGALPEKFLKQAAIWHARLREDDRHRKAFALWLGEDPRKAEAFRQTERLWAALEAPTAALATDGAALMVRR QRRPPIIWRRSAGRRVALAVVLALGLVLAPRGQGLIDSLRADDVTAPGERRSLVLADGSVVALNTDSALAVAMGGDHRRL RLFRGEAWFEVAHDARRPFVVETGDGTVTVTGTRFNLRIDEAGTRVSLSEGRVELSPAHAAGQVKILRPGEQAVVGKTAV GAIDTFDATAVTGWRRGQIVFYDTALRQVVAELNRYRRGPILLARRDLADLRVSGVFDVSDPEGVLAALTGTLPVRMTKV GGLLVVLR >Mature_327_residues AGEGGGPGDGALPEKFLKQAAIWHARLREDDRHRKAFALWLGEDPRKAEAFRQTERLWAALEAPTAALATDGAALMVRRQ RRPPIIWRRSAGRRVALAVVLALGLVLAPRGQGLIDSLRADDVTAPGERRSLVLADGSVVALNTDSALAVAMGGDHRRLR LFRGEAWFEVAHDARRPFVVETGDGTVTVTGTRFNLRIDEAGTRVSLSEGRVELSPAHAAGQVKILRPGEQAVVGKTAVG AIDTFDATAVTGWRRGQIVFYDTALRQVVAELNRYRRGPILLARRDLADLRVSGVFDVSDPEGVLAALTGTLPVRMTKVG GLLVVLR
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=205, Percent_Identity=35.1219512195122, Blast_Score=108, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 35446; Mature: 35315
Theoretical pI: Translated: 11.22; Mature: 11.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGEGGGPGDGALPEKFLKQAAIWHARLREDDRHRKAFALWLGEDPRKAEAFRQTERLWA CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH ALEAPTAALATDGAALMVRRQRRPPIIWRRSAGRRVALAVVLALGLVLAPRGQGLIDSLR HHCCCCHHHHCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHEECCCCCCHHHHHC ADDVTAPGERRSLVLADGSVVALNTDSALAVAMGGDHRRLRLFRGEAWFEVAHDARRPFV CCCCCCCCCCCEEEEECCCEEEEECCCEEEEEECCCCEEEEEEECCHHHHHHHHCCCCEE VETGDGTVTVTGTRFNLRIDEAGTRVSLSEGRVELSPAHAAGQVKILRPGEQAVVGKTAV EECCCCEEEEEEEEEEEEECCCCCEEEECCCEEEECCCCCCCEEEEECCCCCEEECCHHC GAIDTFDATAVTGWRRGQIVFYDTALRQVVAELNRYRRGPILLARRDLADLRVSGVFDVS CCEECCCCCEECCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECC DPEGVLAALTGTLPVRMTKVGGLLVVLR CCCCEEEEEECCCCEEEEECCCEEEEEC >Mature Secondary Structure AGEGGGPGDGALPEKFLKQAAIWHARLREDDRHRKAFALWLGEDPRKAEAFRQTERLWA CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH ALEAPTAALATDGAALMVRRQRRPPIIWRRSAGRRVALAVVLALGLVLAPRGQGLIDSLR HHCCCCHHHHCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHEECCCCCCHHHHHC ADDVTAPGERRSLVLADGSVVALNTDSALAVAMGGDHRRLRLFRGEAWFEVAHDARRPFV CCCCCCCCCCCEEEEECCCEEEEECCCEEEEEECCCCEEEEEEECCHHHHHHHHCCCCEE VETGDGTVTVTGTRFNLRIDEAGTRVSLSEGRVELSPAHAAGQVKILRPGEQAVVGKTAV EECCCCEEEEEEEEEEEEECCCCCEEEECCCEEEECCCCCCCEEEEECCCCCEEECCHHC GAIDTFDATAVTGWRRGQIVFYDTALRQVVAELNRYRRGPILLARRDLADLRVSGVFDVS CCEECCCCCEECCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECC DPEGVLAALTGTLPVRMTKVGGLLVVLR CCCCEEEEEECCCCEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]