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The map label for this gene is araB2 [H]

Identifier: 83592682

GI number: 83592682

Start: 1585705

End: 1587285

Strand: Reverse

Name: araB2 [H]

Synonym: Rru_A1346

Alternate gene names: 83592682

Gene position: 1587285-1585705 (Counterclockwise)

Preceding gene: 83592683

Following gene: 83592679

Centisome position: 36.47

GC content: 68.44

Gene sequence:

>1581_bases
ATGGGCGGGTTGGTGATTGGTGTCGATGTCGGAACGGCAAGCGCGCGCGCCGGGGTTTTTGACCGCAAGGGGCATTTGCT
CGGCCGGGCCGAACACCCCCTCGAAATCGGCCGGCCCGATCCCACCCATGCCGAATACCAGTCCGAACAGATCTGGGAGG
CCGTCGCCAGCGCCGTGCGCGGCGCCGTAAGCGCCGCCGGAGTCAGCGGCGAGGACATCAGCGGCATCGGCTTCGATGCC
ACCTGCTCGCTGGTGGTGCGCGACCGCCAGGGGCTGCCCCTTGGCGTTTCGACCACCGGCGAGGATCGTTGGGACACCAT
CGTCTGGATGGACCACCGCGCCCTGGCCGAGGCCCAGGAATGCACCGATACCGGCCACCGCGTGCTGGGCTATGTCGGCG
GCGTGATGTCGCCCGAAATGGAAATTCCCAAGCTGATGTGGCTGAAGCGGCATTTTCCCCAGCGCTGGGAGCGCGCCGGC
TTCTTTTTCGATCTGGCCGATTTCCTCACCTGGAAGGCCTCGGGCTCGACCGGGCGGTCGCAATGCACGCTCACCTGCAA
ATGGACCTATCTCGCCCATGAGCCGACCGGTTGGCAGGGCGATTTCCTGGAGACCGTCGGCCTGGGCGATCTGCTGGCGC
GCGGCGCCCTGCCCGAGCGCGCCACCCCCATCGGCCAGGATCTGGGCTTTCTGACCGAGGAAGCGGCCGCCGCCCTTGGC
CTGACCACGAGCTGCCGGGTTGGCGCCGGATTGATCGACGCCCATGCCGGGGCGCTGGGCGCCCTGGGCGGCACCTGCGG
CAAGCCGGGGATCGAGCGCCATTTGGCGCTGATCGCCGGCACCTCAAGCTGCCTGATGGCGCTGTCGGCCGATCCCCATC
CCACCCACGGCGTCTGGGGCCCCTATTTCGGCGCGGTGCTGCCCGGCTTGTGGTTGAACGAGGGCGGGCAATCGGTCACC
GGAGCGCTGCTTGATCATGTCATCGCCCTGCATGGGGCCGGCGGCCGCCCCAGCGCCGAGAGGCACGGCGCCATCTGCGC
CCGCATCGCCGAGCTTCGCCAGAGCGAGGGGCCGGCCTTCGCCGCCCGCCTGCATGTGCTGCCCGATTTCCACGGCAACC
GCTCGCCTTTGGCCGATCCCGGGGCCTTGGGCGTGATCAGCGGCCTGGATCTTGACCGCTCCTTTGACAGCTTGTGCCGG
CTTTATTGGCGCACGGCGGTCGGCATCGCCCTTGGGGTGCGCCATATCCTTGACGCCCTGAACGCCCAGGGCCATGCCAT
CGACACCCTTCACATCACCGGCGGCCATATCAAGAACCCGCTGCTGATGGAGCTGTATGCCGACGCCACCGGCTGCACCC
TGGTTCAGCCGCGAACCGAGGACGCGGTGCTGCTGGGCACGGCGATGGTCGCCGCCACCGCCGCCGGCCTCTTCCCCGAT
CTGGCGGCGGCGACCAAGGGCATGGAAGCCGCCTCGATCCCCCGCGCCCCCAACCCGCAGGCCTTTGAACGCTTCACCCG
GGATTACCGGGTTTTCCTGATGATGCACGAACACCGCCAAGCCATCGACCGTCTGAGATGA

Upstream 100 bases:

>100_bases
GCCCCGGTGAAGGGCTTGAAGCCGAGCGTGGTTTTCGGTCAGATGGCTCTTCCGCCAGACCGTCTGGCGCAACGGGATAA
AAACCAAAAGGGGCTTATAG

Downstream 100 bases:

>100_bases
AGCAAACCGTCGTCGCCCCCTGATCAGGCGGCGGCGGACAATCCCCCTGCCCCCTCGGCTGCCTCCTCGACCGAGGCGCG
GTCGTGGATGATCGCCCGGC

Product: pentulose kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MGGLVIGVDVGTASARAGVFDRKGHLLGRAEHPLEIGRPDPTHAEYQSEQIWEAVASAVRGAVSAAGVSGEDISGIGFDA
TCSLVVRDRQGLPLGVSTTGEDRWDTIVWMDHRALAEAQECTDTGHRVLGYVGGVMSPEMEIPKLMWLKRHFPQRWERAG
FFFDLADFLTWKASGSTGRSQCTLTCKWTYLAHEPTGWQGDFLETVGLGDLLARGALPERATPIGQDLGFLTEEAAAALG
LTTSCRVGAGLIDAHAGALGALGGTCGKPGIERHLALIAGTSSCLMALSADPHPTHGVWGPYFGAVLPGLWLNEGGQSVT
GALLDHVIALHGAGGRPSAERHGAICARIAELRQSEGPAFAARLHVLPDFHGNRSPLADPGALGVISGLDLDRSFDSLCR
LYWRTAVGIALGVRHILDALNAQGHAIDTLHITGGHIKNPLLMELYADATGCTLVQPRTEDAVLLGTAMVAATAAGLFPD
LAAATKGMEAASIPRAPNPQAFERFTRDYRVFLMMHEHRQAIDRLR

Sequences:

>Translated_526_residues
MGGLVIGVDVGTASARAGVFDRKGHLLGRAEHPLEIGRPDPTHAEYQSEQIWEAVASAVRGAVSAAGVSGEDISGIGFDA
TCSLVVRDRQGLPLGVSTTGEDRWDTIVWMDHRALAEAQECTDTGHRVLGYVGGVMSPEMEIPKLMWLKRHFPQRWERAG
FFFDLADFLTWKASGSTGRSQCTLTCKWTYLAHEPTGWQGDFLETVGLGDLLARGALPERATPIGQDLGFLTEEAAAALG
LTTSCRVGAGLIDAHAGALGALGGTCGKPGIERHLALIAGTSSCLMALSADPHPTHGVWGPYFGAVLPGLWLNEGGQSVT
GALLDHVIALHGAGGRPSAERHGAICARIAELRQSEGPAFAARLHVLPDFHGNRSPLADPGALGVISGLDLDRSFDSLCR
LYWRTAVGIALGVRHILDALNAQGHAIDTLHITGGHIKNPLLMELYADATGCTLVQPRTEDAVLLGTAMVAATAAGLFPD
LAAATKGMEAASIPRAPNPQAFERFTRDYRVFLMMHEHRQAIDRLR
>Mature_525_residues
GGLVIGVDVGTASARAGVFDRKGHLLGRAEHPLEIGRPDPTHAEYQSEQIWEAVASAVRGAVSAAGVSGEDISGIGFDAT
CSLVVRDRQGLPLGVSTTGEDRWDTIVWMDHRALAEAQECTDTGHRVLGYVGGVMSPEMEIPKLMWLKRHFPQRWERAGF
FFDLADFLTWKASGSTGRSQCTLTCKWTYLAHEPTGWQGDFLETVGLGDLLARGALPERATPIGQDLGFLTEEAAAALGL
TTSCRVGAGLIDAHAGALGALGGTCGKPGIERHLALIAGTSSCLMALSADPHPTHGVWGPYFGAVLPGLWLNEGGQSVTG
ALLDHVIALHGAGGRPSAERHGAICARIAELRQSEGPAFAARLHVLPDFHGNRSPLADPGALGVISGLDLDRSFDSLCRL
YWRTAVGIALGVRHILDALNAQGHAIDTLHITGGHIKNPLLMELYADATGCTLVQPRTEDAVLLGTAMVAATAAGLFPDL
AAATKGMEAASIPRAPNPQAFERFTRDYRVFLMMHEHRQAIDRLR

Specific function: L-lyxose utilization. [C]

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=534, Percent_Identity=43.6329588014981, Blast_Score=416, Evalue=1e-116,
Organism=Homo sapiens, GI164663830, Length=558, Percent_Identity=41.7562724014337, Blast_Score=403, Evalue=1e-112,
Organism=Escherichia coli, GI1790005, Length=510, Percent_Identity=23.3333333333333, Blast_Score=99, Evalue=9e-22,
Organism=Escherichia coli, GI1786249, Length=568, Percent_Identity=25.7042253521127, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1787789, Length=535, Percent_Identity=23.9252336448598, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6320314, Length=517, Percent_Identity=38.2978723404255, Blast_Score=330, Evalue=5e-91,
Organism=Saccharomyces cerevisiae, GI6324080, Length=516, Percent_Identity=26.5503875968992, Blast_Score=133, Evalue=8e-32,
Organism=Drosophila melanogaster, GI24657106, Length=542, Percent_Identity=39.8523985239852, Blast_Score=359, Evalue=3e-99,
Organism=Drosophila melanogaster, GI24657102, Length=542, Percent_Identity=39.8523985239852, Blast_Score=359, Evalue=3e-99,
Organism=Drosophila melanogaster, GI21356323, Length=434, Percent_Identity=39.63133640553, Blast_Score=276, Evalue=3e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR005929 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.16 [H]

Molecular weight: Translated: 55872; Mature: 55741

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGLVIGVDVGTASARAGVFDRKGHLLGRAEHPLEIGRPDPTHAEYQSEQIWEAVASAVR
CCCEEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GAVSAAGVSGEDISGIGFDATCSLVVRDRQGLPLGVSTTGEDRWDTIVWMDHRALAEAQE
HHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCEEEEECCHHHHHHHH
CTDTGHRVLGYVGGVMSPEMEIPKLMWLKRHFPQRWERAGFFFDLADFLTWKASGSTGRS
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHEECCCCCCCCC
QCTLTCKWTYLAHEPTGWQGDFLETVGLGDLLARGALPERATPIGQDLGFLTEEAAAALG
EEEEEEEEEEEEECCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC
LTTSCRVGAGLIDAHAGALGALGGTCGKPGIERHLALIAGTSSCLMALSADPHPTHGVWG
CCCCCCCCCCHHHHCCCHHHHCCCCCCCCCHHHHEEHEECCHHHEEEECCCCCCCCCCCH
PYFGAVLPGLWLNEGGQSVTGALLDHVIALHGAGGRPSAERHGAICARIAELRQSEGPAF
HHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
AARLHVLPDFHGNRSPLADPGALGVISGLDLDRSFDSLCRLYWRTAVGIALGVRHILDAL
EEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NAQGHAIDTLHITGGHIKNPLLMELYADATGCTLVQPRTEDAVLLGTAMVAATAAGLFPD
CCCCCEEEEEEECCCCCCCCEEEEEECCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHH
LAAATKGMEAASIPRAPNPQAFERFTRDYRVFLMMHEHRQAIDRLR
HHHHHCCCCHHCCCCCCCHHHHHHHHHHHEEEEEEHHHHHHHHHCC
>Mature Secondary Structure 
GGLVIGVDVGTASARAGVFDRKGHLLGRAEHPLEIGRPDPTHAEYQSEQIWEAVASAVR
CCEEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GAVSAAGVSGEDISGIGFDATCSLVVRDRQGLPLGVSTTGEDRWDTIVWMDHRALAEAQE
HHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCEEEEECCHHHHHHHH
CTDTGHRVLGYVGGVMSPEMEIPKLMWLKRHFPQRWERAGFFFDLADFLTWKASGSTGRS
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHEECCCCCCCCC
QCTLTCKWTYLAHEPTGWQGDFLETVGLGDLLARGALPERATPIGQDLGFLTEEAAAALG
EEEEEEEEEEEEECCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC
LTTSCRVGAGLIDAHAGALGALGGTCGKPGIERHLALIAGTSSCLMALSADPHPTHGVWG
CCCCCCCCCCHHHHCCCHHHHCCCCCCCCCHHHHEEHEECCHHHEEEECCCCCCCCCCCH
PYFGAVLPGLWLNEGGQSVTGALLDHVIALHGAGGRPSAERHGAICARIAELRQSEGPAF
HHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
AARLHVLPDFHGNRSPLADPGALGVISGLDLDRSFDSLCRLYWRTAVGIALGVRHILDAL
EEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NAQGHAIDTLHITGGHIKNPLLMELYADATGCTLVQPRTEDAVLLGTAMVAATAAGLFPD
CCCCCEEEEEEECCCCCCCCEEEEEECCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHH
LAAATKGMEAASIPRAPNPQAFERFTRDYRVFLMMHEHRQAIDRLR
HHHHHCCCCHHCCCCCCCHHHHHHHHHHHEEEEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA