| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592658
Identifier: 83592658
GI number: 83592658
Start: 1560682
End: 1562355
Strand: Direct
Name: 83592658
Synonym: Rru_A1322
Alternate gene names: NA
Gene position: 1560682-1562355 (Clockwise)
Preceding gene: 83592657
Following gene: 83592659
Centisome position: 35.85
GC content: 64.28
Gene sequence:
>1674_bases ATGTCCAAAACTGGTACAGACAAGAAGTGGGACCACCGATCCGTCGATACGGCGGAGCGGCTCGCGGCGGCGGCCCGGTT CATCGGCCCTGGCAAGGAAGTCAAGGCGGCCGACACCGTGGCCCTGCTCGAAGCGGTCATTCGCGCCGGTGATCGGGTCA ACATCGAAGGCAACAACCAGAAGCAGGCCGATTTCCTCGCCGAATGCCTCAATAAGGTCGACAAGAGCAAGATCCATGAC CTGCACATGGTGCAGTCGGCGGTTCCGCTGCCCGTCCACCTTGATCTGTTCGAGAACGGCATCGCCAAGAAGCTGGACTT CGCCTTCGGCGGCCCCCAGGCCGGCCGTGTCGCCAAGTTCATCAAGGAAGGCAAGCTCGAGCTCGGCGCCATCCACACCT ATCTGGAACTGTTTGGCCGCTACTTCCTCGATCTGACGCCGCGCGTGTCGCTGATCTGCGCCTATAAGGCCGACCGCCAG GGCAACCTCTATACCGGCTTCAACACCGAAGACACCCCGACCATCGTCGAGGCGACCAAGTTCCGCCAGGGCATCGTCAT CGCCCAGGTCAACGAGATCGTCGACACCCTGCCGCGCGTCGATATTCCCGCCGATTGGGTCGACGTGGTGATCGAATCGC CCCAGCCGTTCTTCCTCGAGCCGCTGTTCACCCGCGATCCGGCCCTGGTGACCGACAGCCAGATCCTGCTTGGCATGCTT TGCCTGAAGGGCATCTACGCCGAATACGGCGTGCAGCGCATCAACCACGGCATCGGCTTCCTGACCTCGGCCATCGAACT GATGCTGCCCACCTACGGCGAAGAGCTGGGGCTGAAGGGCAAGGTCTGCACCCATATGATCCTCAACCCCCATCCGACGA TGATCCCGGCGATCGAATCGGGTTGGGTGGACACCATTCATTGCTTCGGCGGTGAATTGGGCATGGAGGAGTATGTCGCG GCCCGTCCCGACATCTTCTTCGTCGGCCCCGACGGCACCTTGCGCTCCAACCGCGCCTTCGCCCAGACGGCCGGTCACTA TGCGCTCGACATGTTCATCGGCGGCACGCTGCAGATCGACAAGTTCGGCAATTCCTCGACGGCGACCGCCAACCGCGTGG CCGGCTTCGGTGGCGCCCCGAACATGGGCTGCGATTCCAAGGGCCGTCGTCACTCGACCGCCAGCTGGCTGAAGTGCGGC GCCGAACAGCCCACCCTTGATCGTCAGCTCGGCACCATGCCGCGCGGCAAGCGCTTGGTGGTGCAGGGTGTCGAGACCTT CGGCGAAGGGCGCGCTCCGGTCTTCGTCGACAAGCTCGACGCCTGGGAACTGGCCGAGAACGCCGGTTTGGATCTGCCGC CGGTGATGATCTACGGCGACGATCTGACCCATGTGGTGACCGAGGAAGGCATCGCCTACCTCAACCGGTGCCCCGACATC GACTCGCGTATGGCCGCCATCCGCGCCGTCGCCGGCTACACCGAGCTCGGCCTGCAGGCCAAGCCCTCGGAAACCCGTGC CCTGCGCGACGCCGGTATCGTCAAGACCCCGGAAGACCTGGGCGTGGACCGCTCGCGCGCCAATCGTTCGATGCTCGCGG CCCGCAATATCCGCGATCTGGTGAGCTGGTCCGGTGGGCTCTACAACCCGCCCGCGCGGTTCCGCAACTGGTGA
Upstream 100 bases:
>100_bases ATGAAAGCGGAGAAGTTCACCACTTTCATTATGGAGAAACGCGTCTCTCTTCGGCTATCGCCGGCTAAACGCGTCAGTAT AACAAAATAGAGGTCGTTCC
Downstream 100 bases:
>100_bases TAAAGGACCTTTGAACCATGGCTTTGAACACCCTGGAATTCGACATCAAGCATGACGCGGGCACTCCGGTTCTGAAGGCC CCCGTCCACATCGGCGTCGT
Product: subunit alpha of malonate decarboxylase
Products: NA
Alternate protein names: Alpha Subunit Of Malonate Decarboxylase; Malonate Decarboxylase Subunit Alpha; Malonate Decarboxylase Alpha-Subunit; Subunit Alpha Of Malonate Decarboxylase
Number of amino acids: Translated: 557; Mature: 556
Protein sequence:
>557_residues MSKTGTDKKWDHRSVDTAERLAAAARFIGPGKEVKAADTVALLEAVIRAGDRVNIEGNNQKQADFLAECLNKVDKSKIHD LHMVQSAVPLPVHLDLFENGIAKKLDFAFGGPQAGRVAKFIKEGKLELGAIHTYLELFGRYFLDLTPRVSLICAYKADRQ GNLYTGFNTEDTPTIVEATKFRQGIVIAQVNEIVDTLPRVDIPADWVDVVIESPQPFFLEPLFTRDPALVTDSQILLGML CLKGIYAEYGVQRINHGIGFLTSAIELMLPTYGEELGLKGKVCTHMILNPHPTMIPAIESGWVDTIHCFGGELGMEEYVA ARPDIFFVGPDGTLRSNRAFAQTAGHYALDMFIGGTLQIDKFGNSSTATANRVAGFGGAPNMGCDSKGRRHSTASWLKCG AEQPTLDRQLGTMPRGKRLVVQGVETFGEGRAPVFVDKLDAWELAENAGLDLPPVMIYGDDLTHVVTEEGIAYLNRCPDI DSRMAAIRAVAGYTELGLQAKPSETRALRDAGIVKTPEDLGVDRSRANRSMLAARNIRDLVSWSGGLYNPPARFRNW
Sequences:
>Translated_557_residues MSKTGTDKKWDHRSVDTAERLAAAARFIGPGKEVKAADTVALLEAVIRAGDRVNIEGNNQKQADFLAECLNKVDKSKIHD LHMVQSAVPLPVHLDLFENGIAKKLDFAFGGPQAGRVAKFIKEGKLELGAIHTYLELFGRYFLDLTPRVSLICAYKADRQ GNLYTGFNTEDTPTIVEATKFRQGIVIAQVNEIVDTLPRVDIPADWVDVVIESPQPFFLEPLFTRDPALVTDSQILLGML CLKGIYAEYGVQRINHGIGFLTSAIELMLPTYGEELGLKGKVCTHMILNPHPTMIPAIESGWVDTIHCFGGELGMEEYVA ARPDIFFVGPDGTLRSNRAFAQTAGHYALDMFIGGTLQIDKFGNSSTATANRVAGFGGAPNMGCDSKGRRHSTASWLKCG AEQPTLDRQLGTMPRGKRLVVQGVETFGEGRAPVFVDKLDAWELAENAGLDLPPVMIYGDDLTHVVTEEGIAYLNRCPDI DSRMAAIRAVAGYTELGLQAKPSETRALRDAGIVKTPEDLGVDRSRANRSMLAARNIRDLVSWSGGLYNPPARFRNW >Mature_556_residues SKTGTDKKWDHRSVDTAERLAAAARFIGPGKEVKAADTVALLEAVIRAGDRVNIEGNNQKQADFLAECLNKVDKSKIHDL HMVQSAVPLPVHLDLFENGIAKKLDFAFGGPQAGRVAKFIKEGKLELGAIHTYLELFGRYFLDLTPRVSLICAYKADRQG NLYTGFNTEDTPTIVEATKFRQGIVIAQVNEIVDTLPRVDIPADWVDVVIESPQPFFLEPLFTRDPALVTDSQILLGMLC LKGIYAEYGVQRINHGIGFLTSAIELMLPTYGEELGLKGKVCTHMILNPHPTMIPAIESGWVDTIHCFGGELGMEEYVAA RPDIFFVGPDGTLRSNRAFAQTAGHYALDMFIGGTLQIDKFGNSSTATANRVAGFGGAPNMGCDSKGRRHSTASWLKCGA EQPTLDRQLGTMPRGKRLVVQGVETFGEGRAPVFVDKLDAWELAENAGLDLPPVMIYGDDLTHVVTEEGIAYLNRCPDID SRMAAIRAVAGYTELGLQAKPSETRALRDAGIVKTPEDLGVDRSRANRSMLAARNIRDLVSWSGGLYNPPARFRNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60973; Mature: 60842
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTGTDKKWDHRSVDTAERLAAAARFIGPGKEVKAADTVALLEAVIRAGDRVNIEGNNQ CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCC KQADFLAECLNKVDKSKIHDLHMVQSAVPLPVHLDLFENGIAKKLDFAFGGPQAGRVAKF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHCCCCCCHHHHHHH IKEGKLELGAIHTYLELFGRYFLDLTPRVSLICAYKADRQGNLYTGFNTEDTPTIVEATK HHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEECCCCCCCCHHHHHHH FRQGIVIAQVNEIVDTLPRVDIPADWVDVVIESPQPFFLEPLFTRDPALVTDSQILLGML HHCCEEEEHHHHHHHHCCCCCCCHHHHHHEECCCCCCEECHHHCCCCCCCCCHHHHHHHH CLKGIYAEYGVQRINHGIGFLTSAIELMLPTYGEELGLKGKVCTHMILNPHPTMIPAIES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHEEEECCCCCCCCCCCC GWVDTIHCFGGELGMEEYVAARPDIFFVGPDGTLRSNRAFAQTAGHYALDMFIGGTLQID CCCHHHHHCCCCCCHHHHHHCCCCEEEECCCCCCCCCCHHHHHCCCEEEEEEECCEEEEE KFGNSSTATANRVAGFGGAPNMGCDSKGRRHSTASWLKCGAEQPTLDRQLGTMPRGKRLV CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCCCEEE VQGVETFGEGRAPVFVDKLDAWELAENAGLDLPPVMIYGDDLTHVVTEEGIAYLNRCPDI EEEHHHHCCCCCCEEEECCCHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCH DSRMAAIRAVAGYTELGLQAKPSETRALRDAGIVKTPEDLGVDRSRANRSMLAARNIRDL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH VSWSGGLYNPPARFRNW HHCCCCCCCCCHHHCCC >Mature Secondary Structure SKTGTDKKWDHRSVDTAERLAAAARFIGPGKEVKAADTVALLEAVIRAGDRVNIEGNNQ CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCC KQADFLAECLNKVDKSKIHDLHMVQSAVPLPVHLDLFENGIAKKLDFAFGGPQAGRVAKF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHCCCCCCHHHHHHH IKEGKLELGAIHTYLELFGRYFLDLTPRVSLICAYKADRQGNLYTGFNTEDTPTIVEATK HHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEECCCCCCCCHHHHHHH FRQGIVIAQVNEIVDTLPRVDIPADWVDVVIESPQPFFLEPLFTRDPALVTDSQILLGML HHCCEEEEHHHHHHHHCCCCCCCHHHHHHEECCCCCCEECHHHCCCCCCCCCHHHHHHHH CLKGIYAEYGVQRINHGIGFLTSAIELMLPTYGEELGLKGKVCTHMILNPHPTMIPAIES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHEEEECCCCCCCCCCCC GWVDTIHCFGGELGMEEYVAARPDIFFVGPDGTLRSNRAFAQTAGHYALDMFIGGTLQID CCCHHHHHCCCCCCHHHHHHCCCCEEEECCCCCCCCCCHHHHHCCCEEEEEEECCEEEEE KFGNSSTATANRVAGFGGAPNMGCDSKGRRHSTASWLKCGAEQPTLDRQLGTMPRGKRLV CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCCCEEE VQGVETFGEGRAPVFVDKLDAWELAENAGLDLPPVMIYGDDLTHVVTEEGIAYLNRCPDI EEEHHHHCCCCCCEEEECCCHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCH DSRMAAIRAVAGYTELGLQAKPSETRALRDAGIVKTPEDLGVDRSRANRSMLAARNIRDL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH VSWSGGLYNPPARFRNW HHCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA