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The map label for this gene is 83592610

Identifier: 83592610

GI number: 83592610

Start: 1498584

End: 1499282

Strand: Reverse

Name: 83592610

Synonym: Rru_A1274

Alternate gene names: NA

Gene position: 1499282-1498584 (Counterclockwise)

Preceding gene: 83592611

Following gene: 83592609

Centisome position: 34.44

GC content: 70.67

Gene sequence:

>699_bases
GTGATCCCGGATCTGCGCATCGGCGGGCTGGCCCGGCTGTCGCTTTGCGACTGGCCGGGCGAGCTGGTCGCCACCGTCTT
CCTACGCGGCTGCCCCTGGCGTTGCCCCTATTGCCATAACCCGGGATTGCTCGGCGCCCGCGACCCCTCCGATCCGGCCT
GGGAGGACGTGTTCGGCTTTCTGCAAAGCCGGCGCGGCCTGCTTGATGGCGTGGTTTTTTCCGGCGGCGAGCCGACCACC
CAGGGCGGATTGGGCGCGGCGATCGATGCGGCGCGGGGATTGGGATTTCGGGTCGGCCTGCATACGGGCGGCGCCTTTCC
CGACCGCTTGGCGGCCCTGTTACCCCACCTCGACTGGGTGGGCTTCGACGTCAAGGCGCCCTTTGACGCCTATGGGGCGA
TCACCGGCGCGGCCGACAGCGGCGCCCGGGCCCGCGACAGCCTGGACCTGCTGCTGGCCTCGGGGATTGCCTACGAAGTT
CGCACCACCCTTCACCCCGCCTTGATCGATGAGGCGGCGCTGGACGCCCTGGCGGCCGAACTGGCGGCCCTGGGCGTCGC
CTCTTACGTGCTCCAGCCCTTCCGCGCCGAAGGCTGCGCCGATGCCGATCTGGCGCGCAGTGCCCGCGGCCTGGCGATGC
CAACCCTATCGGCCCAGGCTCAGGCGGCCTTTCCGCGGTTTTGCGTCCGGGTGGGATAG

Upstream 100 bases:

>100_bases
ACCTCGTTCAACACGGGCAAGAAGGGCGAATTCGCCCAGCGCAAGGCCTTCGTCGAATGCGCCCTGCCCGAGTGAGAAGC
CCGCTGAGGGGGTCTACCCG

Downstream 100 bases:

>100_bases
GGCGATCGCCATCGGGGCAAAAACACCCTCTTCACCCCCTTGACTTGTCAGCCAAGCCCTGGCTCCCTTGTAAGGCCTGG
GGGGAGGCGCGAGAGAGGCT

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MIPDLRIGGLARLSLCDWPGELVATVFLRGCPWRCPYCHNPGLLGARDPSDPAWEDVFGFLQSRRGLLDGVVFSGGEPTT
QGGLGAAIDAARGLGFRVGLHTGGAFPDRLAALLPHLDWVGFDVKAPFDAYGAITGAADSGARARDSLDLLLASGIAYEV
RTTLHPALIDEAALDALAAELAALGVASYVLQPFRAEGCADADLARSARGLAMPTLSAQAQAAFPRFCVRVG

Sequences:

>Translated_232_residues
MIPDLRIGGLARLSLCDWPGELVATVFLRGCPWRCPYCHNPGLLGARDPSDPAWEDVFGFLQSRRGLLDGVVFSGGEPTT
QGGLGAAIDAARGLGFRVGLHTGGAFPDRLAALLPHLDWVGFDVKAPFDAYGAITGAADSGARARDSLDLLLASGIAYEV
RTTLHPALIDEAALDALAAELAALGVASYVLQPFRAEGCADADLARSARGLAMPTLSAQAQAAFPRFCVRVG
>Mature_232_residues
MIPDLRIGGLARLSLCDWPGELVATVFLRGCPWRCPYCHNPGLLGARDPSDPAWEDVFGFLQSRRGLLDGVVFSGGEPTT
QGGLGAAIDAARGLGFRVGLHTGGAFPDRLAALLPHLDWVGFDVKAPFDAYGAITGAADSGARARDSLDLLLASGIAYEV
RTTLHPALIDEAALDALAAELAALGVASYVLQPFRAEGCADADLARSARGLAMPTLSAQAQAAFPRFCVRVG

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the organic radical-activating enzymes family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR012840
- InterPro:   IPR001989
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 24229; Mature: 24229

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPDLRIGGLARLSLCDWPGELVATVFLRGCPWRCPYCHNPGLLGARDPSDPAWEDVFGF
CCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LQSRRGLLDGVVFSGGEPTTQGGLGAAIDAARGLGFRVGLHTGGAFPDRLAALLPHLDWV
HHHHCCHHHHEEECCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCC
GFDVKAPFDAYGAITGAADSGARARDSLDLLLASGIAYEVRTTLHPALIDEAALDALAAE
CCCCCCCCHHHHCEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAALGVASYVLQPFRAEGCADADLARSARGLAMPTLSAQAQAAFPRFCVRVG
HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIPDLRIGGLARLSLCDWPGELVATVFLRGCPWRCPYCHNPGLLGARDPSDPAWEDVFGF
CCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LQSRRGLLDGVVFSGGEPTTQGGLGAAIDAARGLGFRVGLHTGGAFPDRLAALLPHLDWV
HHHHCCHHHHEEECCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCC
GFDVKAPFDAYGAITGAADSGARARDSLDLLLASGIAYEVRTTLHPALIDEAALDALAAE
CCCCCCCCHHHHCEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAALGVASYVLQPFRAEGCADADLARSARGLAMPTLSAQAQAAFPRFCVRVG
HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]