| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is pspB [C]
Identifier: 83592553
GI number: 83592553
Start: 1437676
End: 1437924
Strand: Reverse
Name: pspB [C]
Synonym: Rru_A1217
Alternate gene names: 83592553
Gene position: 1437924-1437676 (Counterclockwise)
Preceding gene: 83592554
Following gene: 83592552
Centisome position: 33.03
GC content: 56.63
Gene sequence:
>249_bases ATGAGCCTATTCGTCTTCCTGTTCGTGCCGCTGATCGTCTTCGTGGCGGTGGTGATGCCGACCTGGATCATCTTCCATTA TGTCACCAAGTGGAAACGCATGCGGATGGTCGATGCCGGCGGCGACTCGGTGGTGGTCGACCAGAAGGAAATCCGCCAGC TGCGCGAAACCGCCCATAAGCTGAACGACCGCATCCTCATTCTGGAATCCATTCTCGACGCCGAGTCGCCGAACTGGAGA AATCAATGA
Upstream 100 bases:
>100_bases TAAAGGCTTCGTCCCCGCTCGCGGGGACGCCGCCCGCCCGCCTCGCCCTACCGCCCGCGCCGCCCGCCTGCGCCCCCGCC TGCGAAGGATTTGATCCGAA
Downstream 100 bases:
>100_bases ACCATGACGTCCCCCCCCGCTATCCCCATTCCCGGCCCCATCCCCAGGACGAGCGACCGGGCATCCTTCGCCGGGTCACC CAGGGCGTCGCCGATCGCCT
Product: phage shock protein B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MSLFVFLFVPLIVFVAVVMPTWIIFHYVTKWKRMRMVDAGGDSVVVDQKEIRQLRETAHKLNDRILILESILDAESPNWR NQ
Sequences:
>Translated_82_residues MSLFVFLFVPLIVFVAVVMPTWIIFHYVTKWKRMRMVDAGGDSVVVDQKEIRQLRETAHKLNDRILILESILDAESPNWR NQ >Mature_81_residues SLFVFLFVPLIVFVAVVMPTWIIFHYVTKWKRMRMVDAGGDSVVVDQKEIRQLRETAHKLNDRILILESILDAESPNWRN Q
Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspb Is Involved In Transcription Regulation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787563, Length=78, Percent_Identity=38.4615384615385, Blast_Score=63, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9673; Mature: 9541
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFVFLFVPLIVFVAVVMPTWIIFHYVTKWKRMRMVDAGGDSVVVDQKEIRQLRETAHK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHH LNDRILILESILDAESPNWRNQ HCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SLFVFLFVPLIVFVAVVMPTWIIFHYVTKWKRMRMVDAGGDSVVVDQKEIRQLRETAHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHH LNDRILILESILDAESPNWRNQ HCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA