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The map label for this gene is hoxK [H]

Identifier: 83592497

GI number: 83592497

Start: 1378441

End: 1379526

Strand: Direct

Name: hoxK [H]

Synonym: Rru_A1161

Alternate gene names: 83592497

Gene position: 1378441-1379526 (Clockwise)

Preceding gene: 83592495

Following gene: 83592498

Centisome position: 31.67

GC content: 64.83

Gene sequence:

>1086_bases
ATGGGGGAAACCGAGACCTTTTACGAGGTCATCCGTCGCCAGGGGATTTCCCGGCGCGGCTTCTTGAAGTTCTGCGGTGT
CACCGCCGCCGGGCTGGGCCTGGGCGCCGGCGGCGCGGCGCGCATCGCCCAGGCGCTGGAAACCAAGCCACGGGTGCCGG
TGATCTGGCTGCATGGCCTGGAATGCACCTGTTGTTCGGAAAGCTTCATCCGCTCGGCCCATCCGCTGGTCAGCGACGTG
GTGCTGTCGATGCTGTCGCTCGATTACGACGACACGCTGATGGCCGCCGCCGGTCATCAGGCCGAGGCGATCCTGGCCGA
GACCCGCGAGACCTATCGCGGGCGCTATATCCTGGCGGTCGAGGGCAACGCGCCGCTGGCCAATGACGGCTTTTTCTGTA
TGCCCGGCGGTCGGCCCTTCGTTGATACCCTGAAGGAAATGGCCGCCGACAGCGCCGCCGTCATCGCCTGGGGATCGTGC
GCCAGTTGGGGCTGCGTTCAGGCGGCCAAGCCCAATCCCACCGGGGCGGTGCCGATTGATCAGGTGATCACCGGCAAGCC
GCTGATCAAGGTGCCGGGCTGTCCGCCGATCGCCGAGGTGATGACCGGGGTGATCAGCTACCTGCTGACCTTCGACCGCT
TCCCCGAGCTTGATCTGCAGGGGCGGCCGAAAATGTTCTATTCCCAACGCATCCACGACAAATGTTACCGCCGCGGCCAT
TTCGATGCCGGCCAGTTCGTCGAGGCCTTCGACGATGACGCCGCCCGCCGCGGTCACTGTCTGTACAAGATGGGCTGCAA
GGGGCCCACGACCTACAACGCCTGTTCGACCACCGGCTGGAACGAGGGCACCTCGTTTCCCATCCAATCGGGCCATGGCT
GCCTGGGCTGTTCAGAGGATGGCTTTTGGGACAAGGGGCCGTTCTACGAGCGGTTGTCGACCATCAATCAGTTCGGGATT
GAAGCCAATGCCGACATCGTAGGCGGAACGGCCGCCGGGGTGGTGGCGGCCGGGGTGGCGGCCCATGCCGGCGTCACCGT
GGCCCGGCGCCTGATGTCGAAGAACGAAAACAAAGACAAAGAGTAG

Upstream 100 bases:

>100_bases
CCCCTAAAAATGGCATGGGTATTGCTAGTAGCCTTTTCCACGAACCGGTGGACGGCGAGGGCGTCGTTGACCCGGACAGA
AGGGGGAGGGGGGGACCGCC

Downstream 100 bases:

>100_bases
GGGGGGAAAGATCCATGAGCGTGACGACGCCCAACGGCTTCACATTGAACGATGCCGGCCGCCGCGTGGTGGTCGATCCG
GTGACCCGCATCGAGGGTCA

Product: Ni-Fe hydrogenase, small subunit

Products: NA

Alternate protein names: Hydrogenlyase; Membrane-bound hydrogenase small subunit [H]

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MGETETFYEVIRRQGISRRGFLKFCGVTAAGLGLGAGGAARIAQALETKPRVPVIWLHGLECTCCSESFIRSAHPLVSDV
VLSMLSLDYDDTLMAAAGHQAEAILAETRETYRGRYILAVEGNAPLANDGFFCMPGGRPFVDTLKEMAADSAAVIAWGSC
ASWGCVQAAKPNPTGAVPIDQVITGKPLIKVPGCPPIAEVMTGVISYLLTFDRFPELDLQGRPKMFYSQRIHDKCYRRGH
FDAGQFVEAFDDDAARRGHCLYKMGCKGPTTYNACSTTGWNEGTSFPIQSGHGCLGCSEDGFWDKGPFYERLSTINQFGI
EANADIVGGTAAGVVAAGVAAHAGVTVARRLMSKNENKDKE

Sequences:

>Translated_361_residues
MGETETFYEVIRRQGISRRGFLKFCGVTAAGLGLGAGGAARIAQALETKPRVPVIWLHGLECTCCSESFIRSAHPLVSDV
VLSMLSLDYDDTLMAAAGHQAEAILAETRETYRGRYILAVEGNAPLANDGFFCMPGGRPFVDTLKEMAADSAAVIAWGSC
ASWGCVQAAKPNPTGAVPIDQVITGKPLIKVPGCPPIAEVMTGVISYLLTFDRFPELDLQGRPKMFYSQRIHDKCYRRGH
FDAGQFVEAFDDDAARRGHCLYKMGCKGPTTYNACSTTGWNEGTSFPIQSGHGCLGCSEDGFWDKGPFYERLSTINQFGI
EANADIVGGTAAGVVAAGVAAHAGVTVARRLMSKNENKDKE
>Mature_360_residues
GETETFYEVIRRQGISRRGFLKFCGVTAAGLGLGAGGAARIAQALETKPRVPVIWLHGLECTCCSESFIRSAHPLVSDVV
LSMLSLDYDDTLMAAAGHQAEAILAETRETYRGRYILAVEGNAPLANDGFFCMPGGRPFVDTLKEMAADSAAVIAWGSCA
SWGCVQAAKPNPTGAVPIDQVITGKPLIKVPGCPPIAEVMTGVISYLLTFDRFPELDLQGRPKMFYSQRIHDKCYRRGHF
DAGQFVEAFDDDAARRGHCLYKMGCKGPTTYNACSTTGWNEGTSFPIQSGHGCLGCSEDGFWDKGPFYERLSTINQFGIE
ANADIVGGTAAGVVAAGVAAHAGVTVARRLMSKNENKDKE

Specific function: This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions [H]

COG id: COG1740

COG function: function code C; Ni,Fe-hydrogenase I small subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family [H]

Homologues:

Organism=Escherichia coli, GI1787206, Length=333, Percent_Identity=67.5675675675676, Blast_Score=499, Evalue=1e-142,
Organism=Escherichia coli, GI1789371, Length=330, Percent_Identity=41.8181818181818, Blast_Score=273, Evalue=1e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006137
- InterPro:   IPR001821
- InterPro:   IPR006311 [H]

Pfam domain/function: PF01058 Oxidored_q6 [H]

EC number: =1.12.99.6 [H]

Molecular weight: Translated: 38752; Mature: 38621

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGETETFYEVIRRQGISRRGFLKFCGVTAAGLGLGAGGAARIAQALETKPRVPVIWLHGL
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECC
ECTCCSESFIRSAHPLVSDVVLSMLSLDYDDTLMAAAGHQAEAILAETRETYRGRYILAV
CEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEEE
EGNAPLANDGFFCMPGGRPFVDTLKEMAADSAAVIAWGSCASWGCVQAAKPNPTGAVPID
CCCCCCCCCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHH
QVITGKPLIKVPGCPPIAEVMTGVISYLLTFDRFPELDLQGRPKMFYSQRIHDKCYRRGH
HHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
FDAGQFVEAFDDDAARRGHCLYKMGCKGPTTYNACSTTGWNEGTSFPIQSGHGCLGCSED
CCHHHHHHHHCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GFWDKGPFYERLSTINQFGIEANADIVGGTAAGVVAAGVAAHAGVTVARRLMSKNENKDK
CCCCCCHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
E
C
>Mature Secondary Structure 
GETETFYEVIRRQGISRRGFLKFCGVTAAGLGLGAGGAARIAQALETKPRVPVIWLHGL
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECC
ECTCCSESFIRSAHPLVSDVVLSMLSLDYDDTLMAAAGHQAEAILAETRETYRGRYILAV
CEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEEE
EGNAPLANDGFFCMPGGRPFVDTLKEMAADSAAVIAWGSCASWGCVQAAKPNPTGAVPID
CCCCCCCCCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHH
QVITGKPLIKVPGCPPIAEVMTGVISYLLTFDRFPELDLQGRPKMFYSQRIHDKCYRRGH
HHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
FDAGQFVEAFDDDAARRGHCLYKMGCKGPTTYNACSTTGWNEGTSFPIQSGHGCLGCSED
CCHHHHHHHHCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GFWDKGPFYERLSTINQFGIEANADIVGGTAAGVVAAGVAAHAGVTVARRLMSKNENKDK
CCCCCCHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488; 2493816 [H]