| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is kdpA
Identifier: 83592491
GI number: 83592491
Start: 1368444
End: 1370153
Strand: Direct
Name: kdpA
Synonym: Rru_A1155
Alternate gene names: 83592491
Gene position: 1368444-1370153 (Clockwise)
Preceding gene: 83592483
Following gene: 83592492
Centisome position: 31.44
GC content: 64.97
Gene sequence:
>1710_bases ATGGACGCCAACGCCATTCTTCAGGTCGTTCTGTTTTGCGCGATCATTCTTGGGCTGACGCCGCTGCTCGGCGGCTATAT GGCCCGGGTTTTCAGCGGCGAGCGGGTTTTGCTCTCGGTGGTCTTCGGACCGCTCGAGCGCGGCCTGTACAGGCTAAGCG GGGTGCGCCCCAAGGAGGAGCAGCATTGGGCGGCCTATGCGCTGTCGATGCTGGTCTTCAATCTGGCGGGCCTGCTTGGG CTCTATCTGATCTTGCGCGTCCAGGGCTGGTTGCCGCTCAATCCGGCGGGCCTGGGCGCCGTCGCCCCCGATCTCGCCTT CAATACCGCCGTTAGCTTCGTGACCAATACCAACTGGCAGGCCTATGGCGGCGAAAGCACGCTGTCGTATTTCTCGCAGA TGGTCGGGCTGACGGTGCAGAATTTCGTTTCGGCGGCGACCGGCATCGCCGTGCTGGTGGCCTTGATCCGCGGCTTCGCC CGGCGCTCGGCCCGCACGCTCGGCAATTTCTGGGTCGATCTCACCCGCACCGTCCTTTACCTGCTGCTGCCGCTCGCCTT CGTCACCGCCCTGGTTCTGGTTTGGCAGGGCGCGCCGCAAACCCTTGGCGATTATGTCCAGGCCGCGCCGCTCGAGGGCG GCTCCCAGGTGATCGCCCTGGGGCCGGTGGCCTCGCAAGAGGCGATCAAGCAGCTTGGCTCGAACGGCGGCGGCTTCTTT TCGGTCAATTCCGCCCATCCCTTCGAGAACCCGACGCCGCTGTCCAATCTGATCGAGATGGTTCTGCTGCTGGCGGTGGC CGCCGGTCTGACCAACACCTTTGGCCGCATGGTCGGCGACACCCGCCAGGGCTGGGCGCTTTTCGCCGCCATGTCCTTGA TGTTCGTCGTCGGCCTTGGCGTGACACTCTGGCAGGAATCCGCGGCTAATCCGGCGATGGTCGTCGCCGGCATCGAGGCC GGCGGCGGCAATATGGAAGGCAAGGAGGTGCGCCTGGGCGTGGCCAATTCGGCGATCTGGGCGGTGGCGACGACGGCGGC CTCCAACGGTTCGGTCAATGCCATGCATGACAGCTTCATGCCGCTTGCGGGCATGGTGCCGATGATCAACATGATGCTGG GCGAGGTGATCTTCGGCGGGGTCGGCGCCGGTCTTTACGGCATGCTGATCTTCGTCATGGTCACCGTGTTCATCGCCGGG CTGATGGTTGGGCGAACCCCCGAATATCTGGGTAAGAAGATCGAGGCCCGCGAGATGAAGCTGGCGGTGATCTCGCTGCT GGTGCCGCCCCTGTGCATCCTGGGCTTCGGCGCCGTCGCGCTCACCTGGCCCCAGGCGGCCGCCTCGGTGCAAGATCCCG GCCCCCATGGCCTGACCGAGGCGCTGTACGCCTATGTCTCGGGAACGGCCAACAACGGCTCGGCCTTTGCCGGCTTCGCC GCCAATGTCTTCCCCCATAATCTGATGATCGGCCTGGCGATGCTGATCGGGCGCTTCCTGGTGATCTTGCCCGTTCTTGC CATCGCCGGGTCCCTGGGCGCCAAGAAGATCGTTCCGGTTTCGGCCGGCACCTTCCCCACCCATGGCGGGCTGTTCATCG GCCTGCTGGTCGGGGTGATCGTCGTCGTCGGCGGCCTGACCTATTTCCCCGTCCTCGCCCTGGGTCCGATCCTCGAGCAG CTTATGCTCAGATCGGGCAGCCTTTTCTGA
Upstream 100 bases:
>100_bases TATCTCGGCTATGTCCTGGTCCGACCCGAGAAATTTTAGAACGGCGGGGGAGACTCCGGCCGGGTCCGCCAAAAAAACTT TCTAGAATGAAGGTCCGATC
Downstream 100 bases:
>100_bases GGTGACATCATGAGCATCCATCGCCCCAGGCATGCCGCGCTGTTCGAGCGCGCCCTGGTCGTGCCCGCCGCCCGCAACGC GGTCTTGAAGCTCGACCCGC
Product: potassium-transporting ATPase subunit A
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] A chain; Potassium-binding and translocating subunit A; Potassium-translocating ATPase A chain
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MDANAILQVVLFCAIILGLTPLLGGYMARVFSGERVLLSVVFGPLERGLYRLSGVRPKEEQHWAAYALSMLVFNLAGLLG LYLILRVQGWLPLNPAGLGAVAPDLAFNTAVSFVTNTNWQAYGGESTLSYFSQMVGLTVQNFVSAATGIAVLVALIRGFA RRSARTLGNFWVDLTRTVLYLLLPLAFVTALVLVWQGAPQTLGDYVQAAPLEGGSQVIALGPVASQEAIKQLGSNGGGFF SVNSAHPFENPTPLSNLIEMVLLLAVAAGLTNTFGRMVGDTRQGWALFAAMSLMFVVGLGVTLWQESAANPAMVVAGIEA GGGNMEGKEVRLGVANSAIWAVATTAASNGSVNAMHDSFMPLAGMVPMINMMLGEVIFGGVGAGLYGMLIFVMVTVFIAG LMVGRTPEYLGKKIEAREMKLAVISLLVPPLCILGFGAVALTWPQAAASVQDPGPHGLTEALYAYVSGTANNGSAFAGFA ANVFPHNLMIGLAMLIGRFLVILPVLAIAGSLGAKKIVPVSAGTFPTHGGLFIGLLVGVIVVVGGLTYFPVLALGPILEQ LMLRSGSLF
Sequences:
>Translated_569_residues MDANAILQVVLFCAIILGLTPLLGGYMARVFSGERVLLSVVFGPLERGLYRLSGVRPKEEQHWAAYALSMLVFNLAGLLG LYLILRVQGWLPLNPAGLGAVAPDLAFNTAVSFVTNTNWQAYGGESTLSYFSQMVGLTVQNFVSAATGIAVLVALIRGFA RRSARTLGNFWVDLTRTVLYLLLPLAFVTALVLVWQGAPQTLGDYVQAAPLEGGSQVIALGPVASQEAIKQLGSNGGGFF SVNSAHPFENPTPLSNLIEMVLLLAVAAGLTNTFGRMVGDTRQGWALFAAMSLMFVVGLGVTLWQESAANPAMVVAGIEA GGGNMEGKEVRLGVANSAIWAVATTAASNGSVNAMHDSFMPLAGMVPMINMMLGEVIFGGVGAGLYGMLIFVMVTVFIAG LMVGRTPEYLGKKIEAREMKLAVISLLVPPLCILGFGAVALTWPQAAASVQDPGPHGLTEALYAYVSGTANNGSAFAGFA ANVFPHNLMIGLAMLIGRFLVILPVLAIAGSLGAKKIVPVSAGTFPTHGGLFIGLLVGVIVVVGGLTYFPVLALGPILEQ LMLRSGSLF >Mature_569_residues MDANAILQVVLFCAIILGLTPLLGGYMARVFSGERVLLSVVFGPLERGLYRLSGVRPKEEQHWAAYALSMLVFNLAGLLG LYLILRVQGWLPLNPAGLGAVAPDLAFNTAVSFVTNTNWQAYGGESTLSYFSQMVGLTVQNFVSAATGIAVLVALIRGFA RRSARTLGNFWVDLTRTVLYLLLPLAFVTALVLVWQGAPQTLGDYVQAAPLEGGSQVIALGPVASQEAIKQLGSNGGGFF SVNSAHPFENPTPLSNLIEMVLLLAVAAGLTNTFGRMVGDTRQGWALFAAMSLMFVVGLGVTLWQESAANPAMVVAGIEA GGGNMEGKEVRLGVANSAIWAVATTAASNGSVNAMHDSFMPLAGMVPMINMMLGEVIFGGVGAGLYGMLIFVMVTVFIAG LMVGRTPEYLGKKIEAREMKLAVISLLVPPLCILGFGAVALTWPQAAASVQDPGPHGLTEALYAYVSGTANNGSAFAGFA ANVFPHNLMIGLAMLIGRFLVILPVLAIAGSLGAKKIVPVSAGTFPTHGGLFIGLLVGVIVVVGGLTYFPVLALGPILEQ LMLRSGSLF
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
COG id: COG2060
COG function: function code P; K+-transporting ATPase, A chain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kdpA family
Homologues:
Organism=Escherichia coli, GI1786915, Length=561, Percent_Identity=52.2281639928699, Blast_Score=546, Evalue=1e-156,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATKA_RHORT (Q2RV89)
Other databases:
- EMBL: CP000230 - RefSeq: YP_426243.1 - STRING: Q2RV89 - GeneID: 3834665 - GenomeReviews: CP000230_GR - KEGG: rru:Rru_A1155 - NMPDR: fig|1085.1.peg.3213 - eggNOG: COG2060 - HOGENOM: HBG291815 - OMA: MSYLTQM - PhylomeDB: Q2RV89 - ProtClustDB: PRK05482 - BioCyc: RRUB269796:RRU_A1155-MONOMER - HAMAP: MF_00275 - InterPro: IPR004623 - PIRSF: PIRSF001294 - TIGRFAMs: TIGR00680
Pfam domain/function: PF03814 KdpA
EC number: =3.6.3.12
Molecular weight: Translated: 59475; Mature: 59475
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xdcd3bc0)-; HASH(0xe9dc6dc)-; HASH(0xea444d0)-; HASH(0xe566754)-; HASH(0xe6ec0c4)-; HASH(0xe75e850)-; HASH(0xec67c8c)-; HASH(0xdee9170)-; HASH(0xd2f0f58)-; HASH(0x9506970)-; HASH(0xdc41670)-; HASH(0xe1bf1a8)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDANAILQVVLFCAIILGLTPLLGGYMARVFSGERVLLSVVFGPLERGLYRLSGVRPKEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHH QHWAAYALSMLVFNLAGLLGLYLILRVQGWLPLNPAGLGAVAPDLAFNTAVSFVTNTNWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCE AYGGESTLSYFSQMVGLTVQNFVSAATGIAVLVALIRGFARRSARTLGNFWVDLTRTVLY ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLPLAFVTALVLVWQGAPQTLGDYVQAAPLEGGSQVIALGPVASQEAIKQLGSNGGGFF HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEE SVNSAHPFENPTPLSNLIEMVLLLAVAAGLTNTFGRMVGDTRQGWALFAAMSLMFVVGLG EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC VTLWQESAANPAMVVAGIEAGGGNMEGKEVRLGVANSAIWAVATTAASNGSVNAMHDSFM HHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEECCCHHHHHEEECCCCCCCCHHHHHCC PLAGMVPMINMMLGEVIFGGVGAGLYGMLIFVMVTVFIAGLMVGRTPEYLGKKIEAREMK CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHH LAVISLLVPPLCILGFGAVALTWPQAAASVQDPGPHGLTEALYAYVSGTANNGSAFAGFA HHHHHHHHHHHHHHHCCHHHEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHH ANVFPHNLMIGLAMLIGRFLVILPVLAIAGSLGAKKIVPVSAGTFPTHGGLFIGLLVGVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH VVVGGLTYFPVLALGPILEQLMLRSGSLF HHHHHHHHHHHHHHHHHHHHHHHHCCCCH >Mature Secondary Structure MDANAILQVVLFCAIILGLTPLLGGYMARVFSGERVLLSVVFGPLERGLYRLSGVRPKEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHH QHWAAYALSMLVFNLAGLLGLYLILRVQGWLPLNPAGLGAVAPDLAFNTAVSFVTNTNWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCE AYGGESTLSYFSQMVGLTVQNFVSAATGIAVLVALIRGFARRSARTLGNFWVDLTRTVLY ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLPLAFVTALVLVWQGAPQTLGDYVQAAPLEGGSQVIALGPVASQEAIKQLGSNGGGFF HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEE SVNSAHPFENPTPLSNLIEMVLLLAVAAGLTNTFGRMVGDTRQGWALFAAMSLMFVVGLG EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC VTLWQESAANPAMVVAGIEAGGGNMEGKEVRLGVANSAIWAVATTAASNGSVNAMHDSFM HHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEECCCHHHHHEEECCCCCCCCHHHHHCC PLAGMVPMINMMLGEVIFGGVGAGLYGMLIFVMVTVFIAGLMVGRTPEYLGKKIEAREMK CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHH LAVISLLVPPLCILGFGAVALTWPQAAASVQDPGPHGLTEALYAYVSGTANNGSAFAGFA HHHHHHHHHHHHHHHCCHHHEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHH ANVFPHNLMIGLAMLIGRFLVILPVLAIAGSLGAKKIVPVSAGTFPTHGGLFIGLLVGVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH VVVGGLTYFPVLALGPILEQLMLRSGSLF HHHHHHHHHHHHHHHHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA