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The map label for this gene is omp16 [H]

Identifier: 83592431

GI number: 83592431

Start: 1284456

End: 1284941

Strand: Direct

Name: omp16 [H]

Synonym: Rru_A1095

Alternate gene names: 83592431

Gene position: 1284456-1284941 (Clockwise)

Preceding gene: 83592430

Following gene: 83592432

Centisome position: 29.51

GC content: 67.28

Gene sequence:

>486_bases
ATGATGAAGTTCGGTTTCCTTGGTGCCGTGGCCGCTACCATGCTGCTCGCCGCCTGTTCGTCTACCCCTGACACGGGCGC
CGGTGGCGCCGGTGCCGGTGGCGCGTCGTCCTCCACCTCCGGCCCGACCGCCGGTTCCGTCGCCGAGTTCCAGCAGGTCG
TCGGTGACCGCGTGTTCTTCGGCTACGACCAGTACAACCTGGCCCCCGACGCCCGCGCCACCCTGCAGCGTCAGGCCCAG
TGGCTGAACCAGTACGGCAACTTCTCGTTGACCGTCGAAGGTCATGCCGACGAGCGCGGCACCCGCGAGTACAACTTGGC
CCTCGGCGAGCGTCGCGCCAATTCCGTGCGCGAGTTCCTGATCAGCCAGGGTGTCAGCGCCAACCGTCTGCGTGTCGTCT
CCTACGGCAAGGAACGCCCGGTTTGCACCGAGACCGCCGAGAGCTGCTATGCTCGCAACCGTCGCGGCGTGTCGGTTCCG
CAGTGA

Upstream 100 bases:

>100_bases
CAGAATATAAACTGCAGGTCCGGTGTGTCTTTACGGTATGAACCCATGCCGGCCGGATGCATCGATCCCGCCGGATGCCC
TTAGCTTGGGAGTGATTTGA

Downstream 100 bases:

>100_bases
TTGGTTGATCGGCGGGCGGCCGGCCCCTCATAAGGCCAGCCGCCGGCCCTGATCCGGTCAGGGGGGACTCCGGGAAACCG
GAGGCCTTCAAAGGCATCAA

Product: OmpA/MotB

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MMKFGFLGAVAATMLLAACSSTPDTGAGGAGAGGASSSTSGPTAGSVAEFQQVVGDRVFFGYDQYNLAPDARATLQRQAQ
WLNQYGNFSLTVEGHADERGTREYNLALGERRANSVREFLISQGVSANRLRVVSYGKERPVCTETAESCYARNRRGVSVP
Q

Sequences:

>Translated_161_residues
MMKFGFLGAVAATMLLAACSSTPDTGAGGAGAGGASSSTSGPTAGSVAEFQQVVGDRVFFGYDQYNLAPDARATLQRQAQ
WLNQYGNFSLTVEGHADERGTREYNLALGERRANSVREFLISQGVSANRLRVVSYGKERPVCTETAESCYARNRRGVSVP
Q
>Mature_161_residues
MMKFGFLGAVAATMLLAACSSTPDTGAGGAGAGGASSSTSGPTAGSVAEFQQVVGDRVFFGYDQYNLAPDARATLQRQAQ
WLNQYGNFSLTVEGHADERGTREYNLALGERRANSVREFLISQGVSANRLRVVSYGKERPVCTETAESCYARNRRGVSVP
Q

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=157, Percent_Identity=40.1273885350318, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI48994946, Length=100, Percent_Identity=33, Blast_Score=60, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17125; Mature: 17125

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKFGFLGAVAATMLLAACSSTPDTGAGGAGAGGASSSTSGPTAGSVAEFQQVVGDRVFF
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEE
GYDQYNLAPDARATLQRQAQWLNQYGNFSLTVEGHADERGTREYNLALGERRANSVREFL
CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
ISQGVSANRLRVVSYGKERPVCTETAESCYARNRRGVSVPQ
HHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMKFGFLGAVAATMLLAACSSTPDTGAGGAGAGGASSSTSGPTAGSVAEFQQVVGDRVFF
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEE
GYDQYNLAPDARATLQRQAQWLNQYGNFSLTVEGHADERGTREYNLALGERRANSVREFL
CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
ISQGVSANRLRVVSYGKERPVCTETAESCYARNRRGVSVPQ
HHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]