| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592405
Identifier: 83592405
GI number: 83592405
Start: 1259241
End: 1259966
Strand: Direct
Name: 83592405
Synonym: Rru_A1069
Alternate gene names: NA
Gene position: 1259241-1259966 (Clockwise)
Preceding gene: 83592404
Following gene: 83592414
Centisome position: 28.93
GC content: 66.12
Gene sequence:
>726_bases ATGACTTCTCTTCAGCCCCTGCGCGCCGAGGATCTGCCCGGCAAGAACTGCGGCGTTTGTGGATTTCGCACCTGCGCCGA ATTGGCCGAACGCTCGGCCGGGCACCCCGATCTGATCAAGCGCTGCCTGCCGCTGAGCGCCGCCAGCCTCGAGGCCGAAG GCCCGGCGGTCGGTCGCCGGCCCGCCCAGCCGGTGTGCGGCGGCGCGTGTGGCGGCGCCGCGTCCAGCGTTGATCTGCTC ACCGCCCGGCCCGAGACGGTCTGGCGTGATACCCTGGACCGCGAGTTCGATTTCTTTCTCGAGCATTTCCCCGAGGAGCC GGGCCCGCGCGAAATCATCCTGCCCCATAACCCCTTGCTGACCCGCGAGCTTGAGATCGAGGTCGGCGATATCCTGATCG GCCGCCCCCTTGGCATGTCCTGCGGCTGCCCGATCACCCATTGCGGGGTGGCGGTCGAGGTCGATAAGCGCACCGGGGTG ATCGTCTGGTGCGTCACCGGTCCGCTTGGCGCCCGCGAGAAGGGTTTCAAGGATCTTGGTTATTACATCGCCGAAGGCTA TGAGGGGCTGATCACCGAGACCCGGGTGCCGATCCGCATCGGCATGCGCTATTACTTCCAGCCCCGCCTGTGCATGCTGC AATGGCGCCATAGCGGGCTGGTCAATTACGTCAACCGTATCGGCGATACGCTGCAGGTGCGGGTCGAAGGCCTGTGGATC GGCTGA
Upstream 100 bases:
>100_bases CCCCGGGTCGTGGGCGAGCTGCGATCGATCTCCACCCGCCGCTTCGCCACTTCCTGACTCCCATCGACTGCTTTGATACG GCCGAGATAAGGACCGAACC
Downstream 100 bases:
>100_bases AAAAGCCCAAATAAAAAGGGATGCGGGTCCGTGACGAACCCGCATCCCCGACATCAAGGGATCGTTCTTGAGGCTTGGCC GCCTGTGGAGCGGCGCTTTC
Product: putative Fe-S cluster
Products: NA
Alternate protein names: Fe-S Cluster; Fe-S Cluster Domain Protein; Redox-Active Protein; Fe-S Protein
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTSLQPLRAEDLPGKNCGVCGFRTCAELAERSAGHPDLIKRCLPLSAASLEAEGPAVGRRPAQPVCGGACGGAASSVDLL TARPETVWRDTLDREFDFFLEHFPEEPGPREIILPHNPLLTRELEIEVGDILIGRPLGMSCGCPITHCGVAVEVDKRTGV IVWCVTGPLGAREKGFKDLGYYIAEGYEGLITETRVPIRIGMRYYFQPRLCMLQWRHSGLVNYVNRIGDTLQVRVEGLWI G
Sequences:
>Translated_241_residues MTSLQPLRAEDLPGKNCGVCGFRTCAELAERSAGHPDLIKRCLPLSAASLEAEGPAVGRRPAQPVCGGACGGAASSVDLL TARPETVWRDTLDREFDFFLEHFPEEPGPREIILPHNPLLTRELEIEVGDILIGRPLGMSCGCPITHCGVAVEVDKRTGV IVWCVTGPLGAREKGFKDLGYYIAEGYEGLITETRVPIRIGMRYYFQPRLCMLQWRHSGLVNYVNRIGDTLQVRVEGLWI G >Mature_240_residues TSLQPLRAEDLPGKNCGVCGFRTCAELAERSAGHPDLIKRCLPLSAASLEAEGPAVGRRPAQPVCGGACGGAASSVDLLT ARPETVWRDTLDREFDFFLEHFPEEPGPREIILPHNPLLTRELEIEVGDILIGRPLGMSCGCPITHCGVAVEVDKRTGVI VWCVTGPLGAREKGFKDLGYYIAEGYEGLITETRVPIRIGMRYYFQPRLCMLQWRHSGLVNYVNRIGDTLQVRVEGLWIG
Specific function: Unknown
COG id: COG2000
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26473; Mature: 26342
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLQPLRAEDLPGKNCGVCGFRTCAELAERSAGHPDLIKRCLPLSAASLEAEGPAVGRR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHCCCCCCCCCCCC PAQPVCGGACGGAASSVDLLTARPETVWRDTLDREFDFFLEHFPEEPGPREIILPHNPLL CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCE TRELEIEVGDILIGRPLGMSCGCPITHCGVAVEVDKRTGVIVWCVTGPLGAREKGFKDLG EEEEEEEECCEEECCCCCCCCCCCHHHCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHH YYIAEGYEGLITETRVPIRIGMRYYFQPRLCMLQWRHSGLVNYVNRIGDTLQVRVEGLWI HHHHCCCCCCCCCCCCCEEECEEEEECCCCEEEHHHHCCHHHHHHHCCCEEEEEEEEEEC G C >Mature Secondary Structure TSLQPLRAEDLPGKNCGVCGFRTCAELAERSAGHPDLIKRCLPLSAASLEAEGPAVGRR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHCCCCCCCCCCCC PAQPVCGGACGGAASSVDLLTARPETVWRDTLDREFDFFLEHFPEEPGPREIILPHNPLL CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCE TRELEIEVGDILIGRPLGMSCGCPITHCGVAVEVDKRTGVIVWCVTGPLGAREKGFKDLG EEEEEEEECCEEECCCCCCCCCCCHHHCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHH YYIAEGYEGLITETRVPIRIGMRYYFQPRLCMLQWRHSGLVNYVNRIGDTLQVRVEGLWI HHHHCCCCCCCCCCCCCEEECEEEEECCCCEEEHHHHCCHHHHHHHCCCEEEEEEEEEEC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA