| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592391
Identifier: 83592391
GI number: 83592391
Start: 1248972
End: 1249592
Strand: Reverse
Name: 83592391
Synonym: Rru_A1055
Alternate gene names: NA
Gene position: 1249592-1248972 (Counterclockwise)
Preceding gene: 83592392
Following gene: 83592389
Centisome position: 28.71
GC content: 64.57
Gene sequence:
>621_bases ATGGCTCTGCCCCTGATGCCCAAGGCGACAGCCGTCTGGCTGGTGGAGAACACCACCCTGACCTTCGAACAGATCGCCGA GTTCTGCGGCATGCATGAACTGGAAGTGCAGGCCATTGCCGACGACGAGGTCGCCGTCGGCATCACCGGGATGGACCCGG TGGTCAAAGGCCAGCTTCTGGCCGATGAAATCGCCCGCTGCGAGGCCAATCCCACCGCCCGCCTCAAGCTGCGGCCCTCG GAAAACCCCATTCCGCAGGCCCGCCAGAAGGGCACCCGCTACACCCCGGTCTCCAAGCGCCACGATCGCCCCGATGGCAT CGCCTGGATCTTGAAGAACCATCCCGAGGTGACGGAAGCCCAGATCTGCAAGCTGCTGGGCACCACCAAGCCGACCATTG GCGCGATCCGCGACCGCAGCCACTGGAACGCCCAGAACATCAAGCCGCGCAACCCGGTGACCCTTGGGCTGTGCAGCGAA GCCGATCTGGAAAAGGCCATCGCCCTGTCGGGAAACCGCCGCAGCCTGATGGCCCAGATGAACGCCACCTATAGCGAATC GGCGGCTTCGGTGCCGCCGGCCTATCATGACGATGACGACGAGGACGATCGCCGGATCTGA
Upstream 100 bases:
>100_bases CACCGAAGGGCTCCGCTTGTCCGGGAGGATGGGCGGAAAAGCGACGCCGTTGTCTGGCCGTTCCGTGAAGGAACCGCCGA AGGAAGAAAGAGGAGACACA
Downstream 100 bases:
>100_bases TCGCGATCAGGGCCGACCGATAAAAAGGGGGGAACCGCGAGGCTCCCCCTTTTTTGATGGGCGAAACGCCGACCCGCCTC CCCGCTCTATTCGGCAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MALPLMPKATAVWLVENTTLTFEQIAEFCGMHELEVQAIADDEVAVGITGMDPVVKGQLLADEIARCEANPTARLKLRPS ENPIPQARQKGTRYTPVSKRHDRPDGIAWILKNHPEVTEAQICKLLGTTKPTIGAIRDRSHWNAQNIKPRNPVTLGLCSE ADLEKAIALSGNRRSLMAQMNATYSESAASVPPAYHDDDDEDDRRI
Sequences:
>Translated_206_residues MALPLMPKATAVWLVENTTLTFEQIAEFCGMHELEVQAIADDEVAVGITGMDPVVKGQLLADEIARCEANPTARLKLRPS ENPIPQARQKGTRYTPVSKRHDRPDGIAWILKNHPEVTEAQICKLLGTTKPTIGAIRDRSHWNAQNIKPRNPVTLGLCSE ADLEKAIALSGNRRSLMAQMNATYSESAASVPPAYHDDDDEDDRRI >Mature_205_residues ALPLMPKATAVWLVENTTLTFEQIAEFCGMHELEVQAIADDEVAVGITGMDPVVKGQLLADEIARCEANPTARLKLRPSE NPIPQARQKGTRYTPVSKRHDRPDGIAWILKNHPEVTEAQICKLLGTTKPTIGAIRDRSHWNAQNIKPRNPVTLGLCSEA DLEKAIALSGNRRSLMAQMNATYSESAASVPPAYHDDDDEDDRRI
Specific function: Unknown
COG id: COG3820
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22732; Mature: 22601
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPLMPKATAVWLVENTTLTFEQIAEFCGMHELEVQAIADDEVAVGITGMDPVVKGQLL CCCCCCCCCEEEEEEECCEECHHHHHHHHCCCEEEEEEECCCCEEEEECCCCHHHHHHHH ADEIARCEANPTARLKLRPSENPIPQARQKGTRYTPVSKRHDRPDGIAWILKNHPEVTEA HHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHH QICKLLGTTKPTIGAIRDRSHWNAQNIKPRNPVTLGLCSEADLEKAIALSGNRRSLMAQM HHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCHHHHHHHH NATYSESAASVPPAYHDDDDEDDRRI CCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ALPLMPKATAVWLVENTTLTFEQIAEFCGMHELEVQAIADDEVAVGITGMDPVVKGQLL CCCCCCCCEEEEEEECCEECHHHHHHHHCCCEEEEEEECCCCEEEEECCCCHHHHHHHH ADEIARCEANPTARLKLRPSENPIPQARQKGTRYTPVSKRHDRPDGIAWILKNHPEVTEA HHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHH QICKLLGTTKPTIGAIRDRSHWNAQNIKPRNPVTLGLCSEADLEKAIALSGNRRSLMAQM HHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCHHHHHHHH NATYSESAASVPPAYHDDDDEDDRRI CCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA