| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592390
Identifier: 83592390
GI number: 83592390
Start: 1247554
End: 1248885
Strand: Direct
Name: 83592390
Synonym: Rru_A1054
Alternate gene names: NA
Gene position: 1247554-1248885 (Clockwise)
Preceding gene: 83592388
Following gene: 83592393
Centisome position: 28.66
GC content: 70.2
Gene sequence:
>1332_bases ATGACGCAGAGGGCCGGTATCCACCCGTCTGCTCGCCGCCCTAGCGCCTTCGATCCCCCCATTGGATGCGCGAGGCCGGC CATGACCGACACCCTTTCCCTGCGACCGATCGTCGGGCGCCGTCGCCTGTGGGAGCTTGATCCCCATTTCCATTGTTCGA TCGTCGGCACCTGCCTGACCATGTCCGATCTGCGCAAGCTGGCGACCAAGACGCGGTTGTCGGTGCCCGCCGATGCCCCG GACTATCGTTTGCACGGCGTGTTCGTGCGCGCCGCCGGCGCCGCCGGTCCGGCGGAAAAGGGCATCGCCAAGCTGATGGA CAAGGATCTGGAGCGCCGCCACACCCGGGCGCTCGCCCAATTCCGCAAGGCCGCCGATAACGACGCGCTCGAGGCGCTAT GGGACGGCGCGCGCGAGGCCGGCGACATCCCCGGACCCTATTGGGCCTTGATGTGCCATCCCTTGGCGTCGCGGACGCTG CTCGAACGGGCCTTTGGCGAGGTCCATATGCTGTCGCATCTGATGGGTGCGGCGAATCGCGCCGATGTCCGCCGCTTGGC CGAGATGGAGCGCGAAACCGAGGCCGTCGAGGACCGTTTGGCCGAGGCCGAGGCCCGGCGCCTGCGCGAGATCGAGATCA AGCAGGGCGAGATCGGCCAGTTGCGCGCCGCCATCGAAGCCGAGCGCGCCCGTACCCGCGCCCTGGTGCGCCGCCTGGAG GAAGCCGGCGAGGGCGGCTGCCGCGATCTGCGCATCCAGACCCTGGAGGCGACGATGGAGGGCCTGCGCGAGCGTCTGAA CCGCGAGGCTTGGCGGGCCGACCGCTTGCAGGGCAAGTTGGCCGAGGCCGAGCGTCTGCTGACCGAGGTGCGCGCCGACC GCGACGATCTGCGCCGGCGCCTCGCCGAACAGGCCGAGGATCTGCGAACCCTGGAGGATCTGGCGCTCGACGACGACGGG GAGGCGGGCGATCGCCCGCCGCTCGATCTGGGTGGCCGGACCATTCTTTATGTCGGCGGCCGTCCGCGCACCGTGCCCAG CCTGCGCAAGCTGGTCGAAGACAGCAATGGCCGCTTCGCCCACCACGACGCCGGGCGCGAGGATGGCCGGGCCCATTTGG GCGAAGTGCTCTCGGGCGCCGATATCGTCATCTGCCCGGTCGATTGCATCAGCCATGATGCCTGCCTGAAGGCCAAGCGC GCCTGCCTGAAGCGCGGCACGCCCTTCGTGCCGCTGTCGTCGGCCGGCCTCGGCGCTTTCGCCCGCTGCCTGCGCGAAAC CGCCCCCCTCTTCGCCCCGGCCAACGACGGCGCGGCGCTGGCTGCCGAATAG
Upstream 100 bases:
>100_bases TGACCGCGTCTTCCCGCCGTTTTAGGCTAGATCGGACCGCGGTGGACGAGACCCGTTAAACGCGGAAACCTTGATCTGGA TTCAATAGGTTAGAGCGGCG
Downstream 100 bases:
>100_bases AGCGGGGAGGCGGGTCGGCGTTTCGCCCATCAAAAAAGGGGGAGCCTCGCGGTTCCCCCCTTTTTATCGGTCGGCCCTGA TCGCGATCAGATCCGGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MTQRAGIHPSARRPSAFDPPIGCARPAMTDTLSLRPIVGRRRLWELDPHFHCSIVGTCLTMSDLRKLATKTRLSVPADAP DYRLHGVFVRAAGAAGPAEKGIAKLMDKDLERRHTRALAQFRKAADNDALEALWDGAREAGDIPGPYWALMCHPLASRTL LERAFGEVHMLSHLMGAANRADVRRLAEMERETEAVEDRLAEAEARRLREIEIKQGEIGQLRAAIEAERARTRALVRRLE EAGEGGCRDLRIQTLEATMEGLRERLNREAWRADRLQGKLAEAERLLTEVRADRDDLRRRLAEQAEDLRTLEDLALDDDG EAGDRPPLDLGGRTILYVGGRPRTVPSLRKLVEDSNGRFAHHDAGREDGRAHLGEVLSGADIVICPVDCISHDACLKAKR ACLKRGTPFVPLSSAGLGAFARCLRETAPLFAPANDGAALAAE
Sequences:
>Translated_443_residues MTQRAGIHPSARRPSAFDPPIGCARPAMTDTLSLRPIVGRRRLWELDPHFHCSIVGTCLTMSDLRKLATKTRLSVPADAP DYRLHGVFVRAAGAAGPAEKGIAKLMDKDLERRHTRALAQFRKAADNDALEALWDGAREAGDIPGPYWALMCHPLASRTL LERAFGEVHMLSHLMGAANRADVRRLAEMERETEAVEDRLAEAEARRLREIEIKQGEIGQLRAAIEAERARTRALVRRLE EAGEGGCRDLRIQTLEATMEGLRERLNREAWRADRLQGKLAEAERLLTEVRADRDDLRRRLAEQAEDLRTLEDLALDDDG EAGDRPPLDLGGRTILYVGGRPRTVPSLRKLVEDSNGRFAHHDAGREDGRAHLGEVLSGADIVICPVDCISHDACLKAKR ACLKRGTPFVPLSSAGLGAFARCLRETAPLFAPANDGAALAAE >Mature_442_residues TQRAGIHPSARRPSAFDPPIGCARPAMTDTLSLRPIVGRRRLWELDPHFHCSIVGTCLTMSDLRKLATKTRLSVPADAPD YRLHGVFVRAAGAAGPAEKGIAKLMDKDLERRHTRALAQFRKAADNDALEALWDGAREAGDIPGPYWALMCHPLASRTLL ERAFGEVHMLSHLMGAANRADVRRLAEMERETEAVEDRLAEAEARRLREIEIKQGEIGQLRAAIEAERARTRALVRRLEE AGEGGCRDLRIQTLEATMEGLRERLNREAWRADRLQGKLAEAERLLTEVRADRDDLRRRLAEQAEDLRTLEDLALDDDGE AGDRPPLDLGGRTILYVGGRPRTVPSLRKLVEDSNGRFAHHDAGREDGRAHLGEVLSGADIVICPVDCISHDACLKAKRA CLKRGTPFVPLSSAGLGAFARCLRETAPLFAPANDGAALAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48818; Mature: 48687
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRAGIHPSARRPSAFDPPIGCARPAMTDTLSLRPIVGRRRLWELDPHFHCSIVGTCLT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHCCCCCCEEHHHHHHHHH MSDLRKLATKTRLSVPADAPDYRLHGVFVRAAGAAGPAEKGIAKLMDKDLERRHTRALAQ HHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH FRKAADNDALEALWDGAREAGDIPGPYWALMCHPLASRTLLERAFGEVHMLSHLMGAANR HHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ADVRRLAEMERETEAVEDRLAEAEARRLREIEIKQGEIGQLRAAIEAERARTRALVRRLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH EAGEGGCRDLRIQTLEATMEGLRERLNREAWRADRLQGKLAEAERLLTEVRADRDDLRRR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LAEQAEDLRTLEDLALDDDGEAGDRPPLDLGGRTILYVGGRPRTVPSLRKLVEDSNGRFA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEE HHDAGREDGRAHLGEVLSGADIVICPVDCISHDACLKAKRACLKRGTPFVPLSSAGLGAF CCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH ARCLRETAPLFAPANDGAALAAE HHHHHHHCCCEECCCCCCCCCCC >Mature Secondary Structure TQRAGIHPSARRPSAFDPPIGCARPAMTDTLSLRPIVGRRRLWELDPHFHCSIVGTCLT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHCCCCCCEEHHHHHHHHH MSDLRKLATKTRLSVPADAPDYRLHGVFVRAAGAAGPAEKGIAKLMDKDLERRHTRALAQ HHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH FRKAADNDALEALWDGAREAGDIPGPYWALMCHPLASRTLLERAFGEVHMLSHLMGAANR HHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ADVRRLAEMERETEAVEDRLAEAEARRLREIEIKQGEIGQLRAAIEAERARTRALVRRLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH EAGEGGCRDLRIQTLEATMEGLRERLNREAWRADRLQGKLAEAERLLTEVRADRDDLRRR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LAEQAEDLRTLEDLALDDDGEAGDRPPLDLGGRTILYVGGRPRTVPSLRKLVEDSNGRFA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEE HHDAGREDGRAHLGEVLSGADIVICPVDCISHDACLKAKRACLKRGTPFVPLSSAGLGAF CCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH ARCLRETAPLFAPANDGAALAAE HHHHHHHCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA