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The map label for this gene is 83592385

Identifier: 83592385

GI number: 83592385

Start: 1242251

End: 1243084

Strand: Reverse

Name: 83592385

Synonym: Rru_A1049

Alternate gene names: NA

Gene position: 1243084-1242251 (Counterclockwise)

Preceding gene: 83592389

Following gene: 83592383

Centisome position: 28.56

GC content: 71.58

Gene sequence:

>834_bases
ATGGCAGACGAGATCGAGCGCACCCAGCCGGCCCGCGAGCCGGGAGACGCCTTGCGCCGGCGGATGGACGCCTATCCACC
GCCCCCCGACCACCCCGACCACGGCGCCAGCCAAGAGGATCGCCAACGCGGCCGCAGCGCCTATCGCCTCGGCGCCTCGC
TGGCCCATCCCCCCCAGCCGATCCAGGACGAGGCCAGCGTGCTTGGCCTGCCGCCCCGGCTGCTGACTCCACGGATCCAG
GAGGCGATCACCGGCCTGATGGAGGAAATGGAGCGCACCCGCCTCCGCCTCGCCAGCAGTCAGGCCCATGAAAGCGTTCT
CAGCGGCCTAGCCGATGCCGATGGCGTGCTGCCGGTGCTCAATCGCCGGGCGATCCTGCGCGAGCTTGATCTGCGGGTGC
GTCTGGCCCGGGAGGGCGGGCCGCCGTTTCTCGTCAGCCTGTTCTATCTGACCAATTTCGACGCCCTGCGCCGCATCGCC
GGCCTCGATGCCGCCCTGGCCGGGCTGACGCGGCTGGCCGCCGAGGTGCTGAGCGCGGCGGGCCTGGGCGACGGACGGTT
GAAGGCCGATGATCTGACCGAGGGGCGCTTCCCCCCCCTGGCCGGCTCCCTGGGCGGTGCCAGCGTCCTTTTGGCCCGGG
GCGACGAACCGCAGCGACCGCCCGATCAATTGGGCGCCCGGGCTGAAAAGATCCGCCTTGGCGTAACCGACAAGGGCCTG
CGCTGGGGGGGCGTTCTGCTGCCGTTGGCGGTATCGGCCGCCACCGTCCTGGCCGATGGCCGTGAAGAGACCGGGGCGCT
TGTCGCCCGCCTAGACGGCCTGCTCAGGCAATGA

Upstream 100 bases:

>100_bases
TCCGTGGTTTATGGCCTCCCCGTGCTATGCTGGCCCGACCGTCAGCGGTTCCCGAAAGGAACCCCCCGCCCCACGACGCC
AGCCTGGAGGCCCGCGAGCC

Downstream 100 bases:

>100_bases
TGTCGGGGATCATCCGGTTTTCAAGACGCGAGATCTGATCCTTGAGGGCAAGCTTACGCTTTTTCAGCCGCTGCATCTGA
ATCATGTCAAAGGGCATGTT

Product: GGDEF family protein

Products: NA

Alternate protein names: GGDEF Family Protein

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MADEIERTQPAREPGDALRRRMDAYPPPPDHPDHGASQEDRQRGRSAYRLGASLAHPPQPIQDEASVLGLPPRLLTPRIQ
EAITGLMEEMERTRLRLASSQAHESVLSGLADADGVLPVLNRRAILRELDLRVRLAREGGPPFLVSLFYLTNFDALRRIA
GLDAALAGLTRLAAEVLSAAGLGDGRLKADDLTEGRFPPLAGSLGGASVLLARGDEPQRPPDQLGARAEKIRLGVTDKGL
RWGGVLLPLAVSAATVLADGREETGALVARLDGLLRQ

Sequences:

>Translated_277_residues
MADEIERTQPAREPGDALRRRMDAYPPPPDHPDHGASQEDRQRGRSAYRLGASLAHPPQPIQDEASVLGLPPRLLTPRIQ
EAITGLMEEMERTRLRLASSQAHESVLSGLADADGVLPVLNRRAILRELDLRVRLAREGGPPFLVSLFYLTNFDALRRIA
GLDAALAGLTRLAAEVLSAAGLGDGRLKADDLTEGRFPPLAGSLGGASVLLARGDEPQRPPDQLGARAEKIRLGVTDKGL
RWGGVLLPLAVSAATVLADGREETGALVARLDGLLRQ
>Mature_276_residues
ADEIERTQPAREPGDALRRRMDAYPPPPDHPDHGASQEDRQRGRSAYRLGASLAHPPQPIQDEASVLGLPPRLLTPRIQE
AITGLMEEMERTRLRLASSQAHESVLSGLADADGVLPVLNRRAILRELDLRVRLAREGGPPFLVSLFYLTNFDALRRIAG
LDAALAGLTRLAAEVLSAAGLGDGRLKADDLTEGRFPPLAGSLGGASVLLARGDEPQRPPDQLGARAEKIRLGVTDKGLR
WGGVLLPLAVSAATVLADGREETGALVARLDGLLRQ

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29710; Mature: 29579

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADEIERTQPAREPGDALRRRMDAYPPPPDHPDHGASQEDRQRGRSAYRLGASLAHPPQP
CCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
IQDEASVLGLPPRLLTPRIQEAITGLMEEMERTRLRLASSQAHESVLSGLADADGVLPVL
CCCCHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
NRRAILRELDLRVRLAREGGPPFLVSLFYLTNFDALRRIAGLDAALAGLTRLAAEVLSAA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGDGRLKADDLTEGRFPPLAGSLGGASVLLARGDEPQRPPDQLGARAEKIRLGVTDKGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCHHHHEEECCCCCCC
RWGGVLLPLAVSAATVLADGREETGALVARLDGLLRQ
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADEIERTQPAREPGDALRRRMDAYPPPPDHPDHGASQEDRQRGRSAYRLGASLAHPPQP
CCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
IQDEASVLGLPPRLLTPRIQEAITGLMEEMERTRLRLASSQAHESVLSGLADADGVLPVL
CCCCHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
NRRAILRELDLRVRLAREGGPPFLVSLFYLTNFDALRRIAGLDAALAGLTRLAAEVLSAA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGDGRLKADDLTEGRFPPLAGSLGGASVLLARGDEPQRPPDQLGARAEKIRLGVTDKGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCHHHHEEECCCCCCC
RWGGVLLPLAVSAATVLADGREETGALVARLDGLLRQ
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA