Click here to switch to the map view.

The map label for this gene is nifZ [H]

Identifier: 83592333

GI number: 83592333

Start: 1185564

End: 1185857

Strand: Direct

Name: nifZ [H]

Synonym: Rru_A0997

Alternate gene names: 83592333

Gene position: 1185564-1185857 (Clockwise)

Preceding gene: 83592332

Following gene: 83592334

Centisome position: 27.24

GC content: 58.5

Gene sequence:

>294_bases
ATGCGCGATGACGCCCCGCCCTCGGCCACTTGCGACGAAGACAACGAACTAGAAGACGATCCGGTCTTTGACTACGGCAC
CAAGGTGCGCGCCCGCAAGCATATCAAGAATGACGGCACCTTTCCCGGCGCCGAGATCGGCGAGGTCATCGTCCGCAAGG
GCGAGGTGGGGTATGTCCATTCGATCGGAACATTCCTCCAGCGCTATTACATCTACGGCATCGATTTCATCGAGTCGGGG
AAACTGGTCGGCATGCGTCTCAAGGAACTGGAACCCGTGGAGGAACAGGCATGA

Upstream 100 bases:

>100_bases
TGCGCGAGATCGTGCGCGCCCGTCAGGCCGAGCGTCCGCCGTCCGCGCGGGCGCTGCCCTTCGCCGCGCTCGCCCCTCAC
GCCAAGACGGAGTGACCCCC

Downstream 100 bases:

>100_bases
AAGTCACCATCCGCAAGCGTCCCGATGGCTTCGAGGCCTATGTGGCCAAAAAGGACATGGAAGAAAAGATCGTCGCCATG
GAAAAGGAAGGGCTGTGGGG

Product: NifZ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MRDDAPPSATCDEDNELEDDPVFDYGTKVRARKHIKNDGTFPGAEIGEVIVRKGEVGYVHSIGTFLQRYYIYGIDFIESG
KLVGMRLKELEPVEEQA

Sequences:

>Translated_97_residues
MRDDAPPSATCDEDNELEDDPVFDYGTKVRARKHIKNDGTFPGAEIGEVIVRKGEVGYVHSIGTFLQRYYIYGIDFIESG
KLVGMRLKELEPVEEQA
>Mature_97_residues
MRDDAPPSATCDEDNELEDDPVFDYGTKVRARKHIKNDGTFPGAEIGEVIVRKGEVGYVHSIGTFLQRYYIYGIDFIESG
KLVGMRLKELEPVEEQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifZ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007415 [H]

Pfam domain/function: PF04319 NifZ [H]

EC number: NA

Molecular weight: Translated: 10937; Mature: 10937

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDDAPPSATCDEDNELEDDPVFDYGTKVRARKHIKNDGTFPGAEIGEVIVRKGEVGYVH
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHH
SIGTFLQRYYIYGIDFIESGKLVGMRLKELEPVEEQA
HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MRDDAPPSATCDEDNELEDDPVFDYGTKVRARKHIKNDGTFPGAEIGEVIVRKGEVGYVH
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHH
SIGTFLQRYYIYGIDFIESGKLVGMRLKELEPVEEQA
HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]