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The map label for this gene is 83592332

Identifier: 83592332

GI number: 83592332

Start: 1184734

End: 1185558

Strand: Direct

Name: 83592332

Synonym: Rru_A0996

Alternate gene names: NA

Gene position: 1184734-1185558 (Clockwise)

Preceding gene: 83592331

Following gene: 83592333

Centisome position: 27.22

GC content: 68.97

Gene sequence:

>825_bases
ATGACGCAAGGCGGGCTGGAACCCACCGACGGTGACGCGACCCCGCGGCTCGACTGGCGCGGTCAGCCCATCGATTGCGC
GGTCTGCCCCTATCGCGATCGCTTGGGCGTGGGCTGCGACGGCGAAACCGCCTGTCTGGCCGACCGCCGGCCGCGCCTGA
TCGAACGCTTCTGCCGCCAAAACCCCGATCTGGCCGATCAGGCCCTGGGACATCCCCATTTCGAGGTGCGGGCCCGGGCG
GCCCGCTATGCCAATCTGTTTCGCCTGACGGCGCTGATCGATGATCCCGACGCCGAGGTGCGCTCGATGATCACCCAGCG
CCTGCCGCGCGGCCTTGTTCTTCGCATGCGCGACGATCCCGACCCCAAGGTGCGCCTGGGGGTGGCGATGCGCCTGGAGG
ATGGCGATCTGGTGCCGCTGACCACCGATCCCGATTACTTCGTTCGCGTGATGGTGGCCCGCCGGCTGGCGCCCGGGATC
TTGCCCTTGATGATCCGCGATCCCGATCCCCAGGTCCGCCGCGAAGTCGCCGGCCGGGTGGGCAACGACTGGCTGCGCAC
GATGATCTGGGATGACGATGGCGATGTCCGCCTTGAGGTGGTCCGCCGCCTTGATCCCGAGCAGCTTTCGCCGCTGGCCC
ACGATCCCGATATCCGCGTGCGCTATGCGGTGGCCGAACGCATCGATGCCGCCCATCTGGCTTTGCTTGACGACGATAGC
GAGGATCTGGTGCGCGAGATCGTGCGCGCCCGTCAGGCCGAGCGTCCGCCGTCCGCGCGGGCGCTGCCCTTCGCCGCGCT
CGCCCCTCACGCCAAGACGGAGTGA

Upstream 100 bases:

>100_bases
CTGACCGGACGCGGGACCCGGGATCGGCCAGCGCTTGGGGGAGACTGGCCGGTCCCGGTGCTTTCTTGACGACGGGAGTT
CCATCAAGGGGAGAGGGGCG

Downstream 100 bases:

>100_bases
CCCCCATGCGCGATGACGCCCCGCCCTCGGCCACTTGCGACGAAGACAACGAACTAGAAGACGATCCGGTCTTTGACTAC
GGCACCAAGGTGCGCGCCCG

Product: leucine-rich repeat-containing protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MTQGGLEPTDGDATPRLDWRGQPIDCAVCPYRDRLGVGCDGETACLADRRPRLIERFCRQNPDLADQALGHPHFEVRARA
ARYANLFRLTALIDDPDAEVRSMITQRLPRGLVLRMRDDPDPKVRLGVAMRLEDGDLVPLTTDPDYFVRVMVARRLAPGI
LPLMIRDPDPQVRREVAGRVGNDWLRTMIWDDDGDVRLEVVRRLDPEQLSPLAHDPDIRVRYAVAERIDAAHLALLDDDS
EDLVREIVRARQAERPPSARALPFAALAPHAKTE

Sequences:

>Translated_274_residues
MTQGGLEPTDGDATPRLDWRGQPIDCAVCPYRDRLGVGCDGETACLADRRPRLIERFCRQNPDLADQALGHPHFEVRARA
ARYANLFRLTALIDDPDAEVRSMITQRLPRGLVLRMRDDPDPKVRLGVAMRLEDGDLVPLTTDPDYFVRVMVARRLAPGI
LPLMIRDPDPQVRREVAGRVGNDWLRTMIWDDDGDVRLEVVRRLDPEQLSPLAHDPDIRVRYAVAERIDAAHLALLDDDS
EDLVREIVRARQAERPPSARALPFAALAPHAKTE
>Mature_273_residues
TQGGLEPTDGDATPRLDWRGQPIDCAVCPYRDRLGVGCDGETACLADRRPRLIERFCRQNPDLADQALGHPHFEVRARAA
RYANLFRLTALIDDPDAEVRSMITQRLPRGLVLRMRDDPDPKVRLGVAMRLEDGDLVPLTTDPDYFVRVMVARRLAPGIL
PLMIRDPDPQVRREVAGRVGNDWLRTMIWDDDGDVRLEVVRRLDPEQLSPLAHDPDIRVRYAVAERIDAAHLALLDDDSE
DLVREIVRARQAERPPSARALPFAALAPHAKTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR004830
- InterPro:   IPR008665 [H]

Pfam domain/function: PF01816 LRV; PF05484 LRV_FeS [H]

EC number: NA

Molecular weight: Translated: 30921; Mature: 30789

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQGGLEPTDGDATPRLDWRGQPIDCAVCPYRDRLGVGCDGETACLADRRPRLIERFCRQ
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCHHHCCCCHHHHHHHHHC
NPDLADQALGHPHFEVRARAARYANLFRLTALIDDPDAEVRSMITQRLPRGLVLRMRDDP
CCCHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCEEEEECCCC
DPKVRLGVAMRLEDGDLVPLTTDPDYFVRVMVARRLAPGILPLMIRDPDPQVRREVAGRV
CCCEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCC
GNDWLRTMIWDDDGDVRLEVVRRLDPEQLSPLAHDPDIRVRYAVAERIDAAHLALLDDDS
CCHHHHHEEECCCCCCHHHHHHHCCHHHCCCCCCCCCCEEEEHHHHHCCHHEEEEECCCH
EDLVREIVRARQAERPPSARALPFAALAPHAKTE
HHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
TQGGLEPTDGDATPRLDWRGQPIDCAVCPYRDRLGVGCDGETACLADRRPRLIERFCRQ
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCHHHCCCCHHHHHHHHHC
NPDLADQALGHPHFEVRARAARYANLFRLTALIDDPDAEVRSMITQRLPRGLVLRMRDDP
CCCHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCEEEEECCCC
DPKVRLGVAMRLEDGDLVPLTTDPDYFVRVMVARRLAPGILPLMIRDPDPQVRREVAGRV
CCCEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCC
GNDWLRTMIWDDDGDVRLEVVRRLDPEQLSPLAHDPDIRVRYAVAERIDAAHLALLDDDS
CCHHHHHEEECCCCCCHHHHHHHCCHHHCCCCCCCCCCEEEEHHHHHCCHHEEEEECCCH
EDLVREIVRARQAERPPSARALPFAALAPHAKTE
HHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2836706 [H]