| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592309
Identifier: 83592309
GI number: 83592309
Start: 1158739
End: 1159161
Strand: Direct
Name: 83592309
Synonym: Rru_A0973
Alternate gene names: NA
Gene position: 1158739-1159161 (Clockwise)
Preceding gene: 83592307
Following gene: 83592310
Centisome position: 26.62
GC content: 64.07
Gene sequence:
>423_bases ATGGCGCAGTCGAGCAATAGCACCCATGAACCCCTCGAGGTGCTGAAGGAAGAGACCGTCAATCGCCACCGGGCGATCGT GTCGGTCATGGAGGAACTGGAAGCCGTCGATTGGTACGACCAGCGCGTCGATGCCTCGACCGATCCCGAGTTGACGGCGA TCCTCGCCCATAATCGCGACGAGGAAAAAGAACACGCGGCGATGACCCTGGAATGGTTGCGCCGCAATGATGCGAAATGG GCCGAGCATCTGCGGACCTATCTGTTCACCGAGGGGCCGATCACCGCGATCGAAGCCGCCGATACGGCGGGCGAGGGATC GGGCGGCGACGCGGCTAAGGGGGCGACGGCCCAAGGCGATGGATCGCTGGGCATCGGCAGCCTGAAGGGCGAAGCGGCCC TAGCCCGTCCACCCCGGTTGTAA
Upstream 100 bases:
>100_bases CGGGCTGCCATCGCATCCTTTTACCGTAAAAGCGGGAACCCCCAGGGCGCGTGGGCGTTTCCCAGCCACCCTATTCACCG GGTTCCAGGAGAGTTCCGTA
Downstream 100 bases:
>100_bases GCCAGTCTGTCCATTTTTTGTGATGTCTGGCGCGGAGATGACCGCCGCCGGACTCCTCCCCCTTATAATGATGTGTTCGA GGATTCCATGAACGATCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MAQSSNSTHEPLEVLKEETVNRHRAIVSVMEELEAVDWYDQRVDASTDPELTAILAHNRDEEKEHAAMTLEWLRRNDAKW AEHLRTYLFTEGPITAIEAADTAGEGSGGDAAKGATAQGDGSLGIGSLKGEAALARPPRL
Sequences:
>Translated_140_residues MAQSSNSTHEPLEVLKEETVNRHRAIVSVMEELEAVDWYDQRVDASTDPELTAILAHNRDEEKEHAAMTLEWLRRNDAKW AEHLRTYLFTEGPITAIEAADTAGEGSGGDAAKGATAQGDGSLGIGSLKGEAALARPPRL >Mature_139_residues AQSSNSTHEPLEVLKEETVNRHRAIVSVMEELEAVDWYDQRVDASTDPELTAILAHNRDEEKEHAAMTLEWLRRNDAKWA EHLRTYLFTEGPITAIEAADTAGEGSGGDAAKGATAQGDGSLGIGSLKGEAALARPPRL
Specific function: Unknown
COG id: COG3461
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15193; Mature: 15062
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSSNSTHEPLEVLKEETVNRHRAIVSVMEELEAVDWYDQRVDASTDPELTAILAHNRD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC EEKEHAAMTLEWLRRNDAKWAEHLRTYLFTEGPITAIEAADTAGEGSGGDAAKGATAQGD CHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC GSLGIGSLKGEAALARPPRL CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AQSSNSTHEPLEVLKEETVNRHRAIVSVMEELEAVDWYDQRVDASTDPELTAILAHNRD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC EEKEHAAMTLEWLRRNDAKWAEHLRTYLFTEGPITAIEAADTAGEGSGGDAAKGATAQGD CHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC GSLGIGSLKGEAALARPPRL CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA