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The map label for this gene is yfiO [C]

Identifier: 83592277

GI number: 83592277

Start: 1122551

End: 1123429

Strand: Reverse

Name: yfiO [C]

Synonym: Rru_A0941

Alternate gene names: 83592277

Gene position: 1123429-1122551 (Counterclockwise)

Preceding gene: 83592279

Following gene: 83592276

Centisome position: 25.81

GC content: 62.91

Gene sequence:

>879_bases
ATGACAGCCGAACGGCCCATCCCCTTCCGGCGCGCTCCGGCCCGGTCGTCCTCGTTCCGCGCCCTGGCCGCCGCCTTTCT
TATCGGTGGCGCCCTGGCGCTTTCGGCCTGCTCGAGCAAAAAAGACGAGCCCGAATACGTCGAACGCCCGGTCGAAGAGC
TTTATAACGAAGCCGTCGATCTGCTCAACACCTCGAGCTACGCCCTGGCCGCCAAGGCCTTCGACGAGGTCGAGCGCCAG
CATCCCTATTCGAGCTGGGCGACCAAGGCGCAGATCATGTCGGCCTATGCCCTTTACGAGAACGAGGCCTATGACGACGC
CGTGGTCGCCATCAACCGCTTCATCGAACTTCATCCGGGCAACCGCGACATCGCCTATGCCTATTACCTGCGCGGCCTGT
GCTACTACGAACAGATCTCCGATGTGCGCCGCGACCAGCAGATCACCCGTCAGGCCATGTCCAATCTGCGCGACGTGGTG
ACGCGCTTCCCCGATTCCCCCTATGCCCGCGACGCCCGTCTGAAGATCGATCTGGCCCGCGACCATATCGCCGGCAAGGA
GATGAGCGTCGGACGGTTCTATCTGAAACGACAGGATTTTCTGGCGGCGCTCAACCGCTTCCGGGTGGTCGTCGAGCAAT
ACGACCAGACCACCCATGTTCCCGAGGCGCTTTATCGCATGGTCGAAATCAACACCCTTCTTGGCCTTCCCGACGAGGCC
AAGCGAGTGGCCGCCGTGCTTGGACACAACTTTCCGGGCAGCGACTGGTATGGTGACGCCTATCGCCTGATCACCGGGGA
AAAGGTGCCGTCCGCCACCGAAGGCGCCGAGCCGCCGCCGTCGTCCTCGTGGACCGATTCCCTTACCGGCTGGCTCTGA

Upstream 100 bases:

>100_bases
CTCCGCGTGATATAGTGCCGGCCGCCGCGCCGTTGGCGGCACCCTCTAGCCGGGTGTCCGCGATGGCGCCATCCTTCTTC
CTCGCCCAGGACGGGAGCCC

Downstream 100 bases:

>100_bases
ACGGCACCCCGCCATGCTAAGCGCCCTGTCGATCCGTGACGTGGTTCTGATCGAAAGGCTCGACCTCGCCTTCGGTCCGG
GCCTTGGCGTGTTCACCGGC

Product: competence lipoprotein ComL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTAERPIPFRRAPARSSSFRALAAAFLIGGALALSACSSKKDEPEYVERPVEELYNEAVDLLNTSSYALAAKAFDEVERQ
HPYSSWATKAQIMSAYALYENEAYDDAVVAINRFIELHPGNRDIAYAYYLRGLCYYEQISDVRRDQQITRQAMSNLRDVV
TRFPDSPYARDARLKIDLARDHIAGKEMSVGRFYLKRQDFLAALNRFRVVVEQYDQTTHVPEALYRMVEINTLLGLPDEA
KRVAAVLGHNFPGSDWYGDAYRLITGEKVPSATEGAEPPPSSSWTDSLTGWL

Sequences:

>Translated_292_residues
MTAERPIPFRRAPARSSSFRALAAAFLIGGALALSACSSKKDEPEYVERPVEELYNEAVDLLNTSSYALAAKAFDEVERQ
HPYSSWATKAQIMSAYALYENEAYDDAVVAINRFIELHPGNRDIAYAYYLRGLCYYEQISDVRRDQQITRQAMSNLRDVV
TRFPDSPYARDARLKIDLARDHIAGKEMSVGRFYLKRQDFLAALNRFRVVVEQYDQTTHVPEALYRMVEINTLLGLPDEA
KRVAAVLGHNFPGSDWYGDAYRLITGEKVPSATEGAEPPPSSSWTDSLTGWL
>Mature_291_residues
TAERPIPFRRAPARSSSFRALAAAFLIGGALALSACSSKKDEPEYVERPVEELYNEAVDLLNTSSYALAAKAFDEVERQH
PYSSWATKAQIMSAYALYENEAYDDAVVAINRFIELHPGNRDIAYAYYLRGLCYYEQISDVRRDQQITRQAMSNLRDVVT
RFPDSPYARDARLKIDLARDHIAGKEMSVGRFYLKRQDFLAALNRFRVVVEQYDQTTHVPEALYRMVEINTLLGLPDEAK
RVAAVLGHNFPGSDWYGDAYRLITGEKVPSATEGAEPPPSSSWTDSLTGWL

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=239, Percent_Identity=28.0334728033473, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32979; Mature: 32848

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAERPIPFRRAPARSSSFRALAAAFLIGGALALSACSSKKDEPEYVERPVEELYNEAVD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LLNTSSYALAAKAFDEVERQHPYSSWATKAQIMSAYALYENEAYDDAVVAINRFIELHPG
HHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCC
NRDIAYAYYLRGLCYYEQISDVRRDQQITRQAMSNLRDVVTRFPDSPYARDARLKIDLAR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHH
DHIAGKEMSVGRFYLKRQDFLAALNRFRVVVEQYDQTTHVPEALYRMVEINTLLGLPDEA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH
KRVAAVLGHNFPGSDWYGDAYRLITGEKVPSATEGAEPPPSSSWTDSLTGWL
HHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
TAERPIPFRRAPARSSSFRALAAAFLIGGALALSACSSKKDEPEYVERPVEELYNEAVD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LLNTSSYALAAKAFDEVERQHPYSSWATKAQIMSAYALYENEAYDDAVVAINRFIELHPG
HHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCC
NRDIAYAYYLRGLCYYEQISDVRRDQQITRQAMSNLRDVVTRFPDSPYARDARLKIDLAR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHH
DHIAGKEMSVGRFYLKRQDFLAALNRFRVVVEQYDQTTHVPEALYRMVEINTLLGLPDEA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH
KRVAAVLGHNFPGSDWYGDAYRLITGEKVPSATEGAEPPPSSSWTDSLTGWL
HHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]