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The map label for this gene is pduA [H]

Identifier: 83592243

GI number: 83592243

Start: 1083320

End: 1083982

Strand: Direct

Name: pduA [H]

Synonym: Rru_A0907

Alternate gene names: 83592243

Gene position: 1083320-1083982 (Clockwise)

Preceding gene: 83592242

Following gene: 83592244

Centisome position: 24.89

GC content: 73.6

Gene sequence:

>663_bases
ATGGCGCAACTGAGCCTCGGGCTGATCGAGACGATCGGCCTCGCAGCAGCCATCGAAGCCGCCGACGCGGCGGTCAAATC
GGCCAATGTCGCGCTGGTGGGCTACGAGTTCGCCCGCGGCGACGGCATGACGGTCGTCAAGGTCCAAGGCGATGTCGGAG
CCGTCAATGCCGCCATCGCGGCGGCGGCGGTGGCGGCGGCCAGGGTCGGCCGGGTGGTTTCCACCCGGGTGATCGCCCGG
CCCGCCGCCGGCATCGACGGCCTGATCGTCAACCGCGATACGGTCGGCGTTCCGCCCCGCGTGGTTTCCGCCCCCGCCGC
CGAGCCCACGGGCGACGCTTCCCCGTCGGCGGCAACGTCCTCCCCGGCGCCGATCGACACCCCCCTTCCGCAGCCCGTCC
CGACGCCGCAAGCGCCGTCGGCCGCGGCGACGGTGGACGAGGTGCCGACCCCGCCGGTGATGGACGAAACGCCGGCCCCG
CCGGTGGTGAACGAGACGCCGGCCCAGCCGGCGGTGGACGAGACGCCGGTCAAACCGGCGGTGGACGAGACGCAGACGCA
CGGCGCGGAGCGGACCGCTCCGTCGCCATCCCGTCAGGGCAAGACGGGCGGCCGCCCCACGGCTGGCAACAACGGCAAAC
CGCGTAACAGGCACGACGCCTAA

Upstream 100 bases:

>100_bases
CGCGCGCGACGTTGGCAAGACGTTGCTGGCGACGCTTGATCCCAGCGAGATCAAGTCCACCACCACGCCGTACATCTAAC
GGCTTAGGGGAGGAACCACC

Downstream 100 bases:

>100_bases
CAGGAGAACGACGATGAGTGGCGAAGCATTGGGTATGGTCGAGACCAAGGGTCTTATCGGGTCCATCGAAGCGGCGGACG
CGATGACCAAATCGGCCAAC

Product: microcompartments protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MAQLSLGLIETIGLAAAIEAADAAVKSANVALVGYEFARGDGMTVVKVQGDVGAVNAAIAAAAVAAARVGRVVSTRVIAR
PAAGIDGLIVNRDTVGVPPRVVSAPAAEPTGDASPSAATSSPAPIDTPLPQPVPTPQAPSAAATVDEVPTPPVMDETPAP
PVVNETPAQPAVDETPVKPAVDETQTHGAERTAPSPSRQGKTGGRPTAGNNGKPRNRHDA

Sequences:

>Translated_220_residues
MAQLSLGLIETIGLAAAIEAADAAVKSANVALVGYEFARGDGMTVVKVQGDVGAVNAAIAAAAVAAARVGRVVSTRVIAR
PAAGIDGLIVNRDTVGVPPRVVSAPAAEPTGDASPSAATSSPAPIDTPLPQPVPTPQAPSAAATVDEVPTPPVMDETPAP
PVVNETPAQPAVDETPVKPAVDETQTHGAERTAPSPSRQGKTGGRPTAGNNGKPRNRHDA
>Mature_219_residues
AQLSLGLIETIGLAAAIEAADAAVKSANVALVGYEFARGDGMTVVKVQGDVGAVNAAIAAAAVAAARVGRVVSTRVIARP
AAGIDGLIVNRDTVGVPPRVVSAPAAEPTGDASPSAATSSPAPIDTPLPQPVPTPQAPSAAATVDEVPTPPVMDETPAPP
VVNETPAQPAVDETPVKPAVDETQTHGAERTAPSPSRQGKTGGRPTAGNNGKPRNRHDA

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 21834; Mature: 21702

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLSLGLIETIGLAAAIEAADAAVKSANVALVGYEFARGDGMTVVKVQGDVGAVNAAIA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHH
AAAVAAARVGRVVSTRVIARPAAGIDGLIVNRDTVGVPPRVVSAPAAEPTGDASPSAATS
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHEECCCCCCCCCCCCCCCCC
SPAPIDTPLPQPVPTPQAPSAAATVDEVPTPPVMDETPAPPVVNETPAQPAVDETPVKPA
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VDETQTHGAERTAPSPSRQGKTGGRPTAGNNGKPRNRHDA
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AQLSLGLIETIGLAAAIEAADAAVKSANVALVGYEFARGDGMTVVKVQGDVGAVNAAIA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHH
AAAVAAARVGRVVSTRVIARPAAGIDGLIVNRDTVGVPPRVVSAPAAEPTGDASPSAATS
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHEECCCCCCCCCCCCCCCCC
SPAPIDTPLPQPVPTPQAPSAAATVDEVPTPPVMDETPAPPVVNETPAQPAVDETPVKPA
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VDETQTHGAERTAPSPSRQGKTGGRPTAGNNGKPRNRHDA
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]