| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is terE [H]
Identifier: 83592230
GI number: 83592230
Start: 1070304
End: 1070882
Strand: Reverse
Name: terE [H]
Synonym: Rru_A0894
Alternate gene names: 83592230
Gene position: 1070882-1070304 (Counterclockwise)
Preceding gene: 83592231
Following gene: 83592229
Centisome position: 24.6
GC content: 60.62
Gene sequence:
>579_bases ATGGCTGTGTCCCTGTCGAAAGGCGGCAACGTTTCCTTGAGCAAGGAGGCTCCCGGTCTTACCGCCATCAATGTTGGTCT GGGTTGGGATGCCCGCGTTACCGACGGTTCCGCCTTCGATCTCGATGCCTCGGCCTTCCTGTTGAATGAAGCCGGCAAGA TCCGCTCCGACGCCGACTTCATTTTCTACAACAACAAGACCTCCTCCGACGGCTCGGTCGTCCATCAGGGCGACAACCAG TCGGGCGCCGGCGAGGGTGATGACGAGACCGTGGCGATCGATCTGACCAAGGTGCCCGCCGACGTGCAGAAGGTGGCCTT CTCGGTGACCATCCACGAAGCCGACGCCCGCAAGCAGAATTTCGGTCAGGTGACCAACGCCTTCATCCGCGTCGTCAATC AGGCCGATGGCAAGGAGATCACCCGCTACGACCTGTCGGAAGACTATTCGACCGAAACCGCGATGATCTTTGGCGAGTTG TACCGCAACGGCGCCGACTGGAAGTTCAAGGCCATCGGCCAGGGCTTCGCCGGCGGCCTTGGCCCCTTGGCCAAGAATTT CGGCGTCAACATCGGCTAA
Upstream 100 bases:
>100_bases GGTAGCCTTGTGTGCTCGCCTGGGCGCCCTTAGATAAGGGGGCCGATGGGCAAGAACTGTTTTGTTCTGGTTTTCATCAA CAATGATAACGGAGATTCCA
Downstream 100 bases:
>100_bases GGCCGGCAAGGCCGGATTTCCGATCGTCGAGAAAACGGCAAATCCCTTGTGCGACACGAGGATCGGGCGGGGATTTGCCT TCAAAGGAGGATTGTCATGG
Product: stress protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MAVSLSKGGNVSLSKEAPGLTAINVGLGWDARVTDGSAFDLDASAFLLNEAGKIRSDADFIFYNNKTSSDGSVVHQGDNQ SGAGEGDDETVAIDLTKVPADVQKVAFSVTIHEADARKQNFGQVTNAFIRVVNQADGKEITRYDLSEDYSTETAMIFGEL YRNGADWKFKAIGQGFAGGLGPLAKNFGVNIG
Sequences:
>Translated_192_residues MAVSLSKGGNVSLSKEAPGLTAINVGLGWDARVTDGSAFDLDASAFLLNEAGKIRSDADFIFYNNKTSSDGSVVHQGDNQ SGAGEGDDETVAIDLTKVPADVQKVAFSVTIHEADARKQNFGQVTNAFIRVVNQADGKEITRYDLSEDYSTETAMIFGEL YRNGADWKFKAIGQGFAGGLGPLAKNFGVNIG >Mature_191_residues AVSLSKGGNVSLSKEAPGLTAINVGLGWDARVTDGSAFDLDASAFLLNEAGKIRSDADFIFYNNKTSSDGSVVHQGDNQS GAGEGDDETVAIDLTKVPADVQKVAFSVTIHEADARKQNFGQVTNAFIRVVNQADGKEITRYDLSEDYSTETAMIFGELY RNGADWKFKAIGQGFAGGLGPLAKNFGVNIG
Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism [H]
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003325 [H]
Pfam domain/function: PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 20305; Mature: 20173
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSLSKGGNVSLSKEAPGLTAINVGLGWDARVTDGSAFDLDASAFLLNEAGKIRSDADF CEEECCCCCCEEECCCCCCEEEEEECCCCCCEECCCCCCCCCCCEEEECCCCCCCCCCCE IFYNNKTSSDGSVVHQGDNQSGAGEGDDETVAIDLTKVPADVQKVAFSVTIHEADARKQN EEECCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCHHEEEEEEEEECCCCCHHH FGQVTNAFIRVVNQADGKEITRYDLSEDYSTETAMIFGELYRNGADWKFKAIGQGFAGGL HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCH GPLAKNFGVNIG HHHHHHCCCCCC >Mature Secondary Structure AVSLSKGGNVSLSKEAPGLTAINVGLGWDARVTDGSAFDLDASAFLLNEAGKIRSDADF EEECCCCCCEEECCCCCCEEEEEECCCCCCEECCCCCCCCCCCEEEECCCCCCCCCCCE IFYNNKTSSDGSVVHQGDNQSGAGEGDDETVAIDLTKVPADVQKVAFSVTIHEADARKQN EEECCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCHHEEEEEEEEECCCCCHHH FGQVTNAFIRVVNQADGKEITRYDLSEDYSTETAMIFGELYRNGADWKFKAIGQGFAGGL HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCH GPLAKNFGVNIG HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3049247 [H]