| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is hemK [H]
Identifier: 83592090
GI number: 83592090
Start: 880072
End: 881049
Strand: Direct
Name: hemK [H]
Synonym: Rru_A0751
Alternate gene names: 83592090
Gene position: 880072-881049 (Clockwise)
Preceding gene: 83592089
Following gene: 83592091
Centisome position: 20.22
GC content: 71.27
Gene sequence:
>978_bases GTGAGCGACGGCGACGGCGGCGGGGAGCAAGGGGGCGGCGGTCCGGCCGAGGCGGAGGAGTCCGCCCTGGTATTGGGCCG GTTGCTCGACCGTGGCGCCTGGCGGCTGAAAGTCGCCGGCGTCGAAAAGCCCCGCCGCGATGCCCGCCTGCTGGCCGGCC ATGTCCTTGGCCTGTCGCCGGGCGCGGTGCTGCTGGCCGATGACCGGGTGGTCACCCCCGAGGAAGCCCAGGCCCTGGAG GCGGTGATCGCCCGCCGCGAAACCCGCGAGCCGGTCTCGCGCATCCTCGGGCATCGCGGGTTCTGGCGCTTCGATCTGGC GCTGGGCGCCGATACCCTGGACCCCCGCCCCGATACGGAGACCCTGGTCGAGGCCGGTCTGGCCGTGCTGGAAGGCTGCG GCGGGCGCATCCTTGATCTGGGCACCGGCAGTGGCTGCATTCTGCTGGCCTTGCTTGCCGATCGTCCCGGGGCGATCGGC CTGGGGATCGATATCGCCCCGGGGGCGGTGCGGGTGGCCCTGCGCAACGCCCGCGCCCTGGGTCTGGAGCGCCGCGCCCT GTTCGCCGTCGGCGATTGGGCGGCGGCGGTCGCTGGCCCCTTCGATCTGATCGTGTCCAATCCCCCCTATATCCCCTCGG CCGATATCGCCGCCCTGGAGCCCGAGGTCGCCCGCTTCGATCCGTCGCGCGCCCTGGACGGCGGGGCCGACGGCCTTGAC CCTTATCGTATCTTGGCCGCCCAGGTGCCGGCGCTGCTGGCGCCGGCCGGGGTTCTGGCCGTCGAATTCGGTCAGGGACA AGCCAGGGATGTGGCCGGGCTCTTGGAAGTGGGCGGTTTATGCCCATATGAGATCAAGAAGGATCTTTCCGGGGAAGAGC GCTGTTTGCTCGCCCGGCGCCGAGCGGCGGGTCCTTTGCCCCCTATCCATATCGATGCCAAGCCGTCGGCACCCGGGAAC GGTCCGACAAAGGCGTGA
Upstream 100 bases:
>100_bases TGCACCGCTTGCCCGAGGTTCTGGCCGGAACCGCCCTTGACGAGGTGATCGAGCCGCTGATCGCCGAGGATCAGGCGACG CGGATGGCGGAGATCGGCGG
Downstream 100 bases:
>100_bases GACGGTCTTCGCTTTGACGGAAAAAAGCGCTGGAAAAAAGGGTTCGGGGCGAATAGGGTGCAATTGGCACGCGGCGGATT GACCGGTGGGGATACGAAGG
Product: modification methylase HemK
Products: NA
Alternate protein names: M.MloHemKP [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSDGDGGGEQGGGGPAEAEESALVLGRLLDRGAWRLKVAGVEKPRRDARLLAGHVLGLSPGAVLLADDRVVTPEEAQALE AVIARRETREPVSRILGHRGFWRFDLALGADTLDPRPDTETLVEAGLAVLEGCGGRILDLGTGSGCILLALLADRPGAIG LGIDIAPGAVRVALRNARALGLERRALFAVGDWAAAVAGPFDLIVSNPPYIPSADIAALEPEVARFDPSRALDGGADGLD PYRILAAQVPALLAPAGVLAVEFGQGQARDVAGLLEVGGLCPYEIKKDLSGEERCLLARRRAAGPLPPIHIDAKPSAPGN GPTKA
Sequences:
>Translated_325_residues MSDGDGGGEQGGGGPAEAEESALVLGRLLDRGAWRLKVAGVEKPRRDARLLAGHVLGLSPGAVLLADDRVVTPEEAQALE AVIARRETREPVSRILGHRGFWRFDLALGADTLDPRPDTETLVEAGLAVLEGCGGRILDLGTGSGCILLALLADRPGAIG LGIDIAPGAVRVALRNARALGLERRALFAVGDWAAAVAGPFDLIVSNPPYIPSADIAALEPEVARFDPSRALDGGADGLD PYRILAAQVPALLAPAGVLAVEFGQGQARDVAGLLEVGGLCPYEIKKDLSGEERCLLARRRAAGPLPPIHIDAKPSAPGN GPTKA >Mature_324_residues SDGDGGGEQGGGGPAEAEESALVLGRLLDRGAWRLKVAGVEKPRRDARLLAGHVLGLSPGAVLLADDRVVTPEEAQALEA VIARRETREPVSRILGHRGFWRFDLALGADTLDPRPDTETLVEAGLAVLEGCGGRILDLGTGSGCILLALLADRPGAIGL GIDIAPGAVRVALRNARALGLERRALFAVGDWAAAVAGPFDLIVSNPPYIPSADIAALEPEVARFDPSRALDGGADGLDP YRILAAQVPALLAPAGVLAVEFGQGQARDVAGLLEVGGLCPYEIKKDLSGEERCLLARRRAAGPLPPIHIDAKPSAPGNG PTKA
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=285, Percent_Identity=30.1754385964912, Blast_Score=103, Evalue=2e-22, Organism=Escherichia coli, GI1787463, Length=264, Percent_Identity=37.8787878787879, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI87082085, Length=203, Percent_Identity=31.0344827586207, Blast_Score=82, Evalue=6e-17, Organism=Drosophila melanogaster, GI24582226, Length=258, Percent_Identity=29.8449612403101, Blast_Score=106, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 33544; Mature: 33413
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGDGGGEQGGGGPAEAEESALVLGRLLDRGAWRLKVAGVEKPRRDARLLAGHVLGLSP CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHEECCC GAVLLADDRVVTPEEAQALEAVIARRETREPVSRILGHRGFWRFDLALGADTLDPRPDTE CEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHH TLVEAGLAVLEGCGGRILDLGTGSGCILLALLADRPGAIGLGIDIAPGAVRVALRNARAL HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCEEECEEECCCHHHHHHHHHHHH GLERRALFAVGDWAAAVAGPFDLIVSNPPYIPSADIAALEPEVARFDPSRALDGGADGLD CCCCCEEEEECCHHHHHCCCEEEEECCCCCCCCCCCHHCCCHHHHCCCCCCCCCCCCCCC PYRILAAQVPALLAPAGVLAVEFGQGQARDVAGLLEVGGLCPYEIKKDLSGEERCLLARR HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHH RAAGPLPPIHIDAKPSAPGNGPTKA HCCCCCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure SDGDGGGEQGGGGPAEAEESALVLGRLLDRGAWRLKVAGVEKPRRDARLLAGHVLGLSP CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHEECCC GAVLLADDRVVTPEEAQALEAVIARRETREPVSRILGHRGFWRFDLALGADTLDPRPDTE CEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHH TLVEAGLAVLEGCGGRILDLGTGSGCILLALLADRPGAIGLGIDIAPGAVRVALRNARAL HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCEEECEEECCCHHHHHHHHHHHH GLERRALFAVGDWAAAVAGPFDLIVSNPPYIPSADIAALEPEVARFDPSRALDGGADGLD CCCCCEEEEECCHHHHHCCCEEEEECCCCCCCCCCCHHCCCHHHHCCCCCCCCCCCCCCC PYRILAAQVPALLAPAGVLAVEFGQGQARDVAGLLEVGGLCPYEIKKDLSGEERCLLARR HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHH RAAGPLPPIHIDAKPSAPGNGPTKA HCCCCCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]