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The map label for this gene is 83592056

Identifier: 83592056

GI number: 83592056

Start: 844364

End: 845083

Strand: Reverse

Name: 83592056

Synonym: Rru_A0717

Alternate gene names: NA

Gene position: 845083-844364 (Counterclockwise)

Preceding gene: 83592059

Following gene: 83592055

Centisome position: 19.41

GC content: 64.72

Gene sequence:

>720_bases
ATGCGGGCATTGAAAAAAATAGCGCCGGACAAAACGGATGGGGTAATGACGGGAATACATCACGACGGATTTTCGGCCCG
GGTTCGGTCGGTTTTGGAGGGACAAAGCGCGCGATCTTTCGCTCAAAAGGCGGGGATCAAAAGCAGCACGCTTCAAAGCA
TTCTTCGCGGCGCCCGCCCAACGGTCGACAATCTGGTGGCCATCGCCAGCGCCTCGGGCGTCAGCATCGACTGGCTGGCC
ACCGGCGGCGCCCCGCCCCCCAAGCTATCCGCGCAAGACGCGCCGGATGGCGCCGCCCATCCCGACGTTTTCTGGATCCC
GCGCTATGATACGCAGCTGGCGACGGGCGACGGCGCCTTCGCCGATCGGGCGGTGCGCACCGACACCATCGCCCTCACCG
CCAAGGTCCTCGGCCAGGGCCTGGAGGGCCTGGATCTTGGCAACTGCCTGTTTTTCACGGTCGAGGGCGATAGCATGGCC
GCCACCCTCAATGATGGCGATGTCGCGCTGATCCACCGGGAAACCCATTGGCGCGACGGCCTTTGGGCCTTTTCCGATGG
CGCGCTGTGCCGATTGCGGCGCTTGCAGTTCAGCGCCGAGGGGGTGCGGGTCATCAACGACAATCGCGAGGCCTATCCGC
CCGAGTTCATCCCCGCCCACCAATGGTCGCTCTCCCATGAATTGGTCGGCCGGGTGCGCTGGGCCGCGCGCTCTTTCTAG

Upstream 100 bases:

>100_bases
TTGTCCTATGAAACGCTCACTTTCAAGTGTTTTTTCGTCCGTGCCCACCCGCTTTGCGAAGCACTTTGAACGATAAAACG
CAAACGAGTCCAGGGTCTGC

Downstream 100 bases:

>100_bases
AGCGGCGATGGCGCGGAAAAGCGGGCACTGGTTTTCCGCGCCATCGCCGCTCCCCTTTGATCCCCTCCGCATCAGGCCAT
TCCCTGGAGGGGGGACGATG

Product: phage repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MRALKKIAPDKTDGVMTGIHHDGFSARVRSVLEGQSARSFAQKAGIKSSTLQSILRGARPTVDNLVAIASASGVSIDWLA
TGGAPPPKLSAQDAPDGAAHPDVFWIPRYDTQLATGDGAFADRAVRTDTIALTAKVLGQGLEGLDLGNCLFFTVEGDSMA
ATLNDGDVALIHRETHWRDGLWAFSDGALCRLRRLQFSAEGVRVINDNREAYPPEFIPAHQWSLSHELVGRVRWAARSF

Sequences:

>Translated_239_residues
MRALKKIAPDKTDGVMTGIHHDGFSARVRSVLEGQSARSFAQKAGIKSSTLQSILRGARPTVDNLVAIASASGVSIDWLA
TGGAPPPKLSAQDAPDGAAHPDVFWIPRYDTQLATGDGAFADRAVRTDTIALTAKVLGQGLEGLDLGNCLFFTVEGDSMA
ATLNDGDVALIHRETHWRDGLWAFSDGALCRLRRLQFSAEGVRVINDNREAYPPEFIPAHQWSLSHELVGRVRWAARSF
>Mature_239_residues
MRALKKIAPDKTDGVMTGIHHDGFSARVRSVLEGQSARSFAQKAGIKSSTLQSILRGARPTVDNLVAIASASGVSIDWLA
TGGAPPPKLSAQDAPDGAAHPDVFWIPRYDTQLATGDGAFADRAVRTDTIALTAKVLGQGLEGLDLGNCLFFTVEGDSMA
ATLNDGDVALIHRETHWRDGLWAFSDGALCRLRRLQFSAEGVRVINDNREAYPPEFIPAHQWSLSHELVGRVRWAARSF

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF01381 HTH_3; PF00717 Peptidase_S24 [H]

EC number: NA

Molecular weight: Translated: 25787; Mature: 25787

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALKKIAPDKTDGVMTGIHHDGFSARVRSVLEGQSARSFAQKAGIKSSTLQSILRGARP
CCCHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCC
TVDNLVAIASASGVSIDWLATGGAPPPKLSAQDAPDGAAHPDVFWIPRYDTQLATGDGAF
CHHHEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCH
ADRAVRTDTIALTAKVLGQGLEGLDLGNCLFFTVEGDSMAATLNDGDVALIHRETHWRDG
HCCHHCHHHHHEEHHHHHCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEEECCCCCCC
LWAFSDGALCRLRRLQFSAEGVRVINDNREAYPPEFIPAHQWSLSHELVGRVRWAARSF
CEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRALKKIAPDKTDGVMTGIHHDGFSARVRSVLEGQSARSFAQKAGIKSSTLQSILRGARP
CCCHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCC
TVDNLVAIASASGVSIDWLATGGAPPPKLSAQDAPDGAAHPDVFWIPRYDTQLATGDGAF
CHHHEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCH
ADRAVRTDTIALTAKVLGQGLEGLDLGNCLFFTVEGDSMAATLNDGDVALIHRETHWRDG
HCCHHCHHHHHEEHHHHHCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEEECCCCCCC
LWAFSDGALCRLRRLQFSAEGVRVINDNREAYPPEFIPAHQWSLSHELVGRVRWAARSF
CEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]