| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is zntB [H]
Identifier: 83592054
GI number: 83592054
Start: 841765
End: 842805
Strand: Reverse
Name: zntB [H]
Synonym: Rru_A0715
Alternate gene names: 83592054
Gene position: 842805-841765 (Counterclockwise)
Preceding gene: 83592055
Following gene: 83592052
Centisome position: 19.36
GC content: 65.71
Gene sequence:
>1041_bases GTGGTCTATCGCAAGGACGACGATAAGGACGCGACGGCCCCGCCGGCGGGGGCCGAGGCCCCCGATCTGCTGTGGATCGT CGCCCTTGATGGCAAGGGCGGCTGCCGCGAGGTCGCCCTTGACGATGTTCCGGCCCTGATCGGCGGGCCGGAACGCCTGT GGATCCATCTGCATCGCGGCTGGCCCAAGGCCAATCGCTGGCTGAAGGAAGTTTTGGCGATCCCGCGCCCGGCCCGGCGC GATCTGTTGGCCGAAAGCACCCGCCCCGATAGCGCTTTCCTGGGCGAGGGGGTCTTGCTCAATATGCGCGGCATCAACGT CAATCCCGGCGCCGATCCCGAGGACATGGTGTCCCTGCGCCTGTGGATCACGACGTCGCTCATCATCACCAGCCGCGCCC GCTTCATCCTGGCGGCCAAGGATGTCCGCGCCCAATTGGCCCAGGGCCAGGGTCCGGTCGACTGCGGTGGGGTGGCCGCC GCCCTCGCCCTTGGTCTGGCCGAGCGCATGCAACCCTTCCTGCTCGAACTCGAAGACGCGATCTATGCGCTTGATGAACG CGACGAGGAACTGCGCGAGAACAATCCGCTGGTCGAAGAAGAGATCGAAGAGGGCCTCCATCAAAGCCGGATCGATATCG TCAGCCTGCGCCGCTACCTCGCTCCCCAACAGGCGGCCCTGACCCGTTTGATGGGCCATCCCCACCCGGCGCTCAGCGCC CAGGACCGGGAAATCCTCGGCGCGGCGCTCGCCACTTTCACCCGTTACGTTGAAGATCTGGATTCCTTGCGCGAACAGGC GGCCCTGCTGCGCGACCGCATCCAGCAGCGCGCCCAACAGCGGATAAACCGGTCGATTTACAAGATGACCCTGCTGGCCG GCATCTTCCTGCCACTGACCTTCTTCACCGGTCTGCTCGGCGTCAATCTGGGGGGCATGCCGGGCGCCCAATCGCCCTTC GGCTTCTGGATCCTGGTCGGCCTGCTGGTCGCCCTGGCCATCGGCGAATTCCTTTATATCCGCCACAGCCGCCGGTTTTG A
Upstream 100 bases:
>100_bases GATCTGGGCTACCACACCAAACACGTCGACACCATCTTCCGTCGGGTCTTCGGCGACAATTAGCCTAGGCAGCGGGTAAC CTTGGAAGCGGGGCGCGCGG
Downstream 100 bases:
>100_bases CTCCCAGCGGGCGGCGCCTTTTCAAGCCACTCTCAGAACGGCTCGCGGGGGTGGGCCCTTTCGCGGGCCTCGGCCTGCCC CTGACATTTCTCAAGCTTGA
Product: Mg2+ transporter protein, CorA-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MVYRKDDDKDATAPPAGAEAPDLLWIVALDGKGGCREVALDDVPALIGGPERLWIHLHRGWPKANRWLKEVLAIPRPARR DLLAESTRPDSAFLGEGVLLNMRGINVNPGADPEDMVSLRLWITTSLIITSRARFILAAKDVRAQLAQGQGPVDCGGVAA ALALGLAERMQPFLLELEDAIYALDERDEELRENNPLVEEEIEEGLHQSRIDIVSLRRYLAPQQAALTRLMGHPHPALSA QDREILGAALATFTRYVEDLDSLREQAALLRDRIQQRAQQRINRSIYKMTLLAGIFLPLTFFTGLLGVNLGGMPGAQSPF GFWILVGLLVALAIGEFLYIRHSRRF
Sequences:
>Translated_346_residues MVYRKDDDKDATAPPAGAEAPDLLWIVALDGKGGCREVALDDVPALIGGPERLWIHLHRGWPKANRWLKEVLAIPRPARR DLLAESTRPDSAFLGEGVLLNMRGINVNPGADPEDMVSLRLWITTSLIITSRARFILAAKDVRAQLAQGQGPVDCGGVAA ALALGLAERMQPFLLELEDAIYALDERDEELRENNPLVEEEIEEGLHQSRIDIVSLRRYLAPQQAALTRLMGHPHPALSA QDREILGAALATFTRYVEDLDSLREQAALLRDRIQQRAQQRINRSIYKMTLLAGIFLPLTFFTGLLGVNLGGMPGAQSPF GFWILVGLLVALAIGEFLYIRHSRRF >Mature_346_residues MVYRKDDDKDATAPPAGAEAPDLLWIVALDGKGGCREVALDDVPALIGGPERLWIHLHRGWPKANRWLKEVLAIPRPARR DLLAESTRPDSAFLGEGVLLNMRGINVNPGADPEDMVSLRLWITTSLIITSRARFILAAKDVRAQLAQGQGPVDCGGVAA ALALGLAERMQPFLLELEDAIYALDERDEELRENNPLVEEEIEEGLHQSRIDIVSLRRYLAPQQAALTRLMGHPHPALSA QDREILGAALATFTRYVEDLDSLREQAALLRDRIQQRAQQRINRSIYKMTLLAGIFLPLTFFTGLLGVNLGGMPGAQSPF GFWILVGLLVALAIGEFLYIRHSRRF
Specific function: Mediates efflux of zinc ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI1787604, Length=330, Percent_Identity=33.6363636363636, Blast_Score=179, Evalue=3e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 38342; Mature: 38342
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYRKDDDKDATAPPAGAEAPDLLWIVALDGKGGCREVALDDVPALIGGPERLWIHLHRG CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCHHHHCCCCEEEEEEECC WPKANRWLKEVLAIPRPARRDLLAESTRPDSAFLGEGVLLNMRGINVNPGADPEDMVSLR CCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHH LWITTSLIITSRARFILAAKDVRAQLAQGQGPVDCGGVAAALALGLAERMQPFLLELEDA HHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IYALDERDEELRENNPLVEEEIEEGLHQSRIDIVSLRRYLAPQQAALTRLMGHPHPALSA HHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCC QDREILGAALATFTRYVEDLDSLREQAALLRDRIQQRAQQRINRSIYKMTLLAGIFLPLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFTGLLGVNLGGMPGAQSPFGFWILVGLLVALAIGEFLYIRHSRRF HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVYRKDDDKDATAPPAGAEAPDLLWIVALDGKGGCREVALDDVPALIGGPERLWIHLHRG CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCHHHHCCCCEEEEEEECC WPKANRWLKEVLAIPRPARRDLLAESTRPDSAFLGEGVLLNMRGINVNPGADPEDMVSLR CCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHH LWITTSLIITSRARFILAAKDVRAQLAQGQGPVDCGGVAAALALGLAERMQPFLLELEDA HHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IYALDERDEELRENNPLVEEEIEEGLHQSRIDIVSLRRYLAPQQAALTRLMGHPHPALSA HHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCC QDREILGAALATFTRYVEDLDSLREQAALLRDRIQQRAQQRINRSIYKMTLLAGIFLPLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFTGLLGVNLGGMPGAQSPFGFWILVGLLVALAIGEFLYIRHSRRF HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA