| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592051
Identifier: 83592051
GI number: 83592051
Start: 839713
End: 840306
Strand: Reverse
Name: 83592051
Synonym: Rru_A0712
Alternate gene names: NA
Gene position: 840306-839713 (Counterclockwise)
Preceding gene: 83592052
Following gene: 161777628
Centisome position: 19.3
GC content: 73.06
Gene sequence:
>594_bases ATGACACCGGCGGACTTCAAACAGTGGCGCAAGCTTCTGGGACTGTCGCAGAAAGAGGCCGCCGAAGCGCTCGGCCTCAA GCGGCGGGTGGTTCAGTATTATGAAAAGGGCGAGCGCGACGGCGACGAGGTCAGCGTGCCCAAGATCGTCCGCCTCGCCT GCTGGGCCTTGCAGTCCGGGATCGCCGATTACCAGGGGCCCATCGCCGCCCAGGACGCCCCGCCCGCGCCAGGCAAGGGT GGCGCCAAGCGCGGCAAGAAGGCCGCCAAGGCCGCCCGGGACTCGGGAGCGGAGTCGGCTACGGACGGGGCCGCGACCGC GGCGGACTCCCTGCCGGACGGCGCCGGAGGGTCCGACGCCCCCCGCCCTTTAGCCGCCTCCGGGCCAAACGAGGCCGCAA ACGCTGTTCCCGCTGCCCCGATCGCCGGCGAGGCCGCCCCTCTGGACGATGCCGCTGCCGCCCCCGCCGCTGAGTCGGCG GCCCCGCCGAAGCGGACCGCCACCCGCCCGGCGCGGGCCCCCAAAACACCGCGCAAAATCAAGGCCCGCCCCGCCTCGCC AGCAGCCAAATCGCCCGCCGAAGACGGGGAGTGA
Upstream 100 bases:
>100_bases ATTCACCATTGCGATACCGCGCCGTTCCGGCTATGTAATAGACAAAGGGGATCCCAAGAGCGAACACTCTTCCCCCCACC CAAGCAACCGAGAGATCACC
Downstream 100 bases:
>100_bases GGCGGGGTCGGGGATCGGTGGGCGAGAACTATCGATTTACAGCCCACCCCCCTTTGCTGCTATAAGATCGCACATCCGCC CGGGGGAGGTCTCCAGAGAG
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTPADFKQWRKLLGLSQKEAAEALGLKRRVVQYYEKGERDGDEVSVPKIVRLACWALQSGIADYQGPIAAQDAPPAPGKG GAKRGKKAAKAARDSGAESATDGAATAADSLPDGAGGSDAPRPLAASGPNEAANAVPAAPIAGEAAPLDDAAAAPAAESA APPKRTATRPARAPKTPRKIKARPASPAAKSPAEDGE
Sequences:
>Translated_197_residues MTPADFKQWRKLLGLSQKEAAEALGLKRRVVQYYEKGERDGDEVSVPKIVRLACWALQSGIADYQGPIAAQDAPPAPGKG GAKRGKKAAKAARDSGAESATDGAATAADSLPDGAGGSDAPRPLAASGPNEAANAVPAAPIAGEAAPLDDAAAAPAAESA APPKRTATRPARAPKTPRKIKARPASPAAKSPAEDGE >Mature_196_residues TPADFKQWRKLLGLSQKEAAEALGLKRRVVQYYEKGERDGDEVSVPKIVRLACWALQSGIADYQGPIAAQDAPPAPGKGG AKRGKKAAKAARDSGAESATDGAATAADSLPDGAGGSDAPRPLAASGPNEAANAVPAAPIAGEAAPLDDAAAAPAAESAA PPKRTATRPARAPKTPRKIKARPASPAAKSPAEDGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19830; Mature: 19699
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPADFKQWRKLLGLSQKEAAEALGLKRRVVQYYEKGERDGDEVSVPKIVRLACWALQSG CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH IADYQGPIAAQDAPPAPGKGGAKRGKKAAKAARDSGAESATDGAATAADSLPDGAGGSDA HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCC PRPLAASGPNEAANAVPAAPIAGEAAPLDDAAAAPAAESAAPPKRTATRPARAPKTPRKI CCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHCCCCCCCCCCCHHC KARPASPAAKSPAEDGE CCCCCCCCCCCCCCCCC >Mature Secondary Structure TPADFKQWRKLLGLSQKEAAEALGLKRRVVQYYEKGERDGDEVSVPKIVRLACWALQSG CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH IADYQGPIAAQDAPPAPGKGGAKRGKKAAKAARDSGAESATDGAATAADSLPDGAGGSDA HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCC PRPLAASGPNEAANAVPAAPIAGEAAPLDDAAAAPAAESAAPPKRTATRPARAPKTPRKI CCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHCCCCCCCCCCCHHC KARPASPAAKSPAEDGE CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA