| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is purL
Identifier: 83592047
GI number: 83592047
Start: 835476
End: 837698
Strand: Reverse
Name: purL
Synonym: Rru_A0708
Alternate gene names: 83592047
Gene position: 837698-835476 (Counterclockwise)
Preceding gene: 83592048
Following gene: 83592046
Centisome position: 19.24
GC content: 67.16
Gene sequence:
>2223_bases GTGAGCCAGTCTGCGAGCACTCCGGCGACGCCCATCACGGCGAAGATCGTCGCCGAGCACGGGTTGACCGAGGCCGAATA CGCCAAGGTCCTCGCCATCATGGGGCGCGAGCCCAATCTGGTCGAACTGGGCATCTTCTCGGTCATGTGGTCGGAGCATT GCTCCTACAAGTCCTCGAAGAAGTGGCTCAAGACCCTGCCGACCACGGCGCCCTGGGTGATCCAGGGACCGGGCGAGAAC GCCGGGGTCATCGACATCGGCGATGGCCTGACCGCCATCTTCAAGATGGAAAGCCATAACCACCCCAGCTACATCGAGCC CTATCAGGGCGCGGCGACGGGCGTTGGCGGCATCTTGCGCGATGTCTTCACCATGGGCGCCCGGCCGGTGGCCAATCTCA ACGCCTTGCGCTTTGGCGATCCCTCCGACCCGCGCACCCGCCACCTGATCTCGGGCGTCGTCGCCGGCATCGGCGGCTAT GGCAATTGCGTCGGCGTGCCCACCGTTGGCGGCGAGGTCAATTTCCACGCCAGCTTCAACGGCAATAATCTGGTCAACGC CATGACCGTCGGCGTCGCCCGCGCCGACCGCATCTTCTATTCGGCCGCCGCCGGCATCGGCAATTCGGTGGTCTATGTCG GTTCGAAGACCGGCCGCGACGGCATCCACGGCGCCACCATGGCCTCGGCCGAGTTCTCCGAGGACTCCGAGGAAAAGCGC CCCACCGTTCAGGTCGGCGACCCGTTCACCGAAAAGCTGCTGATCGAAGCCTGCCTGGAACTGATGAACACCGACGCCAT CGTCGCCATTCAGGACATGGGGGCGGCCGGTCTGACCTCCTCATGCTTCGAGATGGCCTCGAAGGGCGGCATGGGCGTCG ATCTGGCCCTTGACCGCGTGCCGATGCGCGAAGAGGGCATGACCCCTTACGAACTGATGCTGTCGGAAAGCCAGGAGCGC ATGCTCATGGTGCTCAAGCCCGGCAAGGAGGACATGGCGCGCGCCCTGTTCGAGAAGTGGGAGCTTGATTTCGCCATCAT CGGCACCCTGACCGACAGCGGCCGCATGGTGCTGACTTGGCATGGCGAGGTTGTCGGCGATCTGCCGATCGATCCGCTGG CCGCCGCCAGCCCCGAATACGACCGGCCCTGGGAACCGACGCCGATGGCCGCCGCCGCCGATCTCAGCGGCGCCGAGGAC ACGCCGTGGAGCGAGGCCCTGCTGCGCCTGATCGGCTGCCCCGATGTCGCCAGCCGGCGCTGGATCTGGGAGCAGTATGA CCATCTGGTGATGGGCAATACCCTGCAGCGTCCCGGTGGCGACGCCGCGGTGATCCGCCTTGACGAGGCGCCGGGCAAGG GTCTGGCGATGACCACCGATTGCACGCCGCGCTACGTCCACGCCGATCCGGTCGAAGGCGGCAAGCAGGCGGTGGCCGAG GCTTGGCGCAATCTGACCGCCGTCGGCGCCCGGCCCTTGGCCATCACCGACAACATGAACTTCGGCAATCCCGAAAAGCC GCGGATCATGGGCCAGTTCGTCGGCGCCTGCCAGGGGATCAGCGAGGCCTGTCTGGCCCTCGACTTCCCGGTGGTCTCGG GCAATGTCTCGCTCTACAACGAGACCAACGGTCAGGCGATTTTACCGACCCCGACCATCGGCGGCGTCGGCGTGCTTGAT AACGTCGAAGCCAGCGTCTCCATCGCCCTCAAGGCGGCCGGCGAGGCCATCCTGGTGGCCGGCGGCTTCCATGGCTCGAC CGGGGCATGGCTTGGCCAGTCGCTGTTCCTGCGCGAAATCCTGGGCCGCGAAGAAGGCGCGCCGCCGCCCGTCGATCTGG CGGCCGAGCGCAAGGTTGGCGATTTCGTCCGTGGGCTGATCCTTGGCGCGAGCGTCACCGCCTGCCACGATCTGTCCGAT GGCGGCCTGCTGGTCGCCCTGGCCGAAATGGCCATGGCCGGCGACCTGGGGGCCGAGCTGACGCTGGAGGGCCATCCCGA CAATGGCCGGCTGTTTGGCGAGGATCAGGGCCGCTATCTGCTGACGGTCGCCGAAGGCGACCGCGACGCGGTGGTCGCGG CGGCCGAGGCCGCCGGCGTGCCGCTGCGGGTGGTCGGCACCACCGGCGGCGACGCCCTGGTGGTCAACGGCTTTGTCGGA CCCAGCGTGGCAGCCTTGCGCAAGGTTCACGAGGAGTGGCTGCCCACCTATATGGCGGGTTAG
Upstream 100 bases:
>100_bases GGGTGCTCGGCATGATGCCCCACCCCGAAAACCTGGTCGAACCGGCGCTGGGCGGCATCGGCGGCCGGGCGCTGTTTCAG TCCATCGTGGAGAGCCTGTC
Downstream 100 bases:
>100_bases ATCGCGACGCCAGCCGACAGACCTCTTTGAGAGCGGCGCGGGGAAAAGCCCTTTCCCCTTTCCCCTGCGCCGCTCTACTC TTGTTTTTTTTCCCCTCCCC
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II
Number of amino acids: Translated: 740; Mature: 739
Protein sequence:
>740_residues MSQSASTPATPITAKIVAEHGLTEAEYAKVLAIMGREPNLVELGIFSVMWSEHCSYKSSKKWLKTLPTTAPWVIQGPGEN AGVIDIGDGLTAIFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPVANLNALRFGDPSDPRTRHLISGVVAGIGGY GNCVGVPTVGGEVNFHASFNGNNLVNAMTVGVARADRIFYSAAAGIGNSVVYVGSKTGRDGIHGATMASAEFSEDSEEKR PTVQVGDPFTEKLLIEACLELMNTDAIVAIQDMGAAGLTSSCFEMASKGGMGVDLALDRVPMREEGMTPYELMLSESQER MLMVLKPGKEDMARALFEKWELDFAIIGTLTDSGRMVLTWHGEVVGDLPIDPLAAASPEYDRPWEPTPMAAAADLSGAED TPWSEALLRLIGCPDVASRRWIWEQYDHLVMGNTLQRPGGDAAVIRLDEAPGKGLAMTTDCTPRYVHADPVEGGKQAVAE AWRNLTAVGARPLAITDNMNFGNPEKPRIMGQFVGACQGISEACLALDFPVVSGNVSLYNETNGQAILPTPTIGGVGVLD NVEASVSIALKAAGEAILVAGGFHGSTGAWLGQSLFLREILGREEGAPPPVDLAAERKVGDFVRGLILGASVTACHDLSD GGLLVALAEMAMAGDLGAELTLEGHPDNGRLFGEDQGRYLLTVAEGDRDAVVAAAEAAGVPLRVVGTTGGDALVVNGFVG PSVAALRKVHEEWLPTYMAG
Sequences:
>Translated_740_residues MSQSASTPATPITAKIVAEHGLTEAEYAKVLAIMGREPNLVELGIFSVMWSEHCSYKSSKKWLKTLPTTAPWVIQGPGEN AGVIDIGDGLTAIFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPVANLNALRFGDPSDPRTRHLISGVVAGIGGY GNCVGVPTVGGEVNFHASFNGNNLVNAMTVGVARADRIFYSAAAGIGNSVVYVGSKTGRDGIHGATMASAEFSEDSEEKR PTVQVGDPFTEKLLIEACLELMNTDAIVAIQDMGAAGLTSSCFEMASKGGMGVDLALDRVPMREEGMTPYELMLSESQER MLMVLKPGKEDMARALFEKWELDFAIIGTLTDSGRMVLTWHGEVVGDLPIDPLAAASPEYDRPWEPTPMAAAADLSGAED TPWSEALLRLIGCPDVASRRWIWEQYDHLVMGNTLQRPGGDAAVIRLDEAPGKGLAMTTDCTPRYVHADPVEGGKQAVAE AWRNLTAVGARPLAITDNMNFGNPEKPRIMGQFVGACQGISEACLALDFPVVSGNVSLYNETNGQAILPTPTIGGVGVLD NVEASVSIALKAAGEAILVAGGFHGSTGAWLGQSLFLREILGREEGAPPPVDLAAERKVGDFVRGLILGASVTACHDLSD GGLLVALAEMAMAGDLGAELTLEGHPDNGRLFGEDQGRYLLTVAEGDRDAVVAAAEAAGVPLRVVGTTGGDALVVNGFVG PSVAALRKVHEEWLPTYMAG >Mature_739_residues SQSASTPATPITAKIVAEHGLTEAEYAKVLAIMGREPNLVELGIFSVMWSEHCSYKSSKKWLKTLPTTAPWVIQGPGENA GVIDIGDGLTAIFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPVANLNALRFGDPSDPRTRHLISGVVAGIGGYG NCVGVPTVGGEVNFHASFNGNNLVNAMTVGVARADRIFYSAAAGIGNSVVYVGSKTGRDGIHGATMASAEFSEDSEEKRP TVQVGDPFTEKLLIEACLELMNTDAIVAIQDMGAAGLTSSCFEMASKGGMGVDLALDRVPMREEGMTPYELMLSESQERM LMVLKPGKEDMARALFEKWELDFAIIGTLTDSGRMVLTWHGEVVGDLPIDPLAAASPEYDRPWEPTPMAAAADLSGAEDT PWSEALLRLIGCPDVASRRWIWEQYDHLVMGNTLQRPGGDAAVIRLDEAPGKGLAMTTDCTPRYVHADPVEGGKQAVAEA WRNLTAVGARPLAITDNMNFGNPEKPRIMGQFVGACQGISEACLALDFPVVSGNVSLYNETNGQAILPTPTIGGVGVLDN VEASVSIALKAAGEAILVAGGFHGSTGAWLGQSLFLREILGREEGAPPPVDLAAERKVGDFVRGLILGASVTACHDLSDG GLLVALAEMAMAGDLGAELTLEGHPDNGRLFGEDQGRYLLTVAEGDRDAVVAAAEAAGVPLRVVGTTGGDALVVNGFVGP SVAALRKVHEEWLPTYMAG
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family
Homologues:
Organism=Homo sapiens, GI31657129, Length=700, Percent_Identity=27.7142857142857, Blast_Score=111, Evalue=2e-24, Organism=Escherichia coli, GI48994899, Length=786, Percent_Identity=26.7175572519084, Blast_Score=153, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17553022, Length=735, Percent_Identity=24.2176870748299, Blast_Score=102, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6321498, Length=777, Percent_Identity=23.4234234234234, Blast_Score=114, Evalue=5e-26, Organism=Drosophila melanogaster, GI24582111, Length=740, Percent_Identity=25.6756756756757, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI24582109, Length=740, Percent_Identity=25.6756756756757, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI17137292, Length=740, Percent_Identity=25.6756756756757, Blast_Score=118, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURL_RHORT (Q2RWI3)
Other databases:
- EMBL: CP000230 - RefSeq: YP_425799.1 - ProteinModelPortal: Q2RWI3 - SMR: Q2RWI3 - STRING: Q2RWI3 - GeneID: 3833945 - GenomeReviews: CP000230_GR - KEGG: rru:Rru_A0708 - NMPDR: fig|1085.1.peg.1637 - eggNOG: COG0046 - HOGENOM: HBG311214 - OMA: YGNSFGV - PhylomeDB: Q2RWI3 - BioCyc: RRUB269796:RRU_A0708-MONOMER - GO: GO:0005737 - HAMAP: MF_00420 - InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 - TIGRFAMs: TIGR01736
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C; SSF56042 AIR_synth_C; SSF55326 PurM_N-like
EC number: =6.3.5.3
Molecular weight: Translated: 77893; Mature: 77762
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSASTPATPITAKIVAEHGLTEAEYAKVLAIMGREPNLVELGIFSVMWSEHCSYKSSK CCCCCCCCCCCCEEEHHHHCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCHHH KWLKTLPTTAPWVIQGPGENAGVIDIGDGLTAIFKMESHNHPSYIEPYQGAATGVGGILR HHHHHCCCCCCEEEECCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHH DVFTMGARPVANLNALRFGDPSDPRTRHLISGVVAGIGGYGNCVGVPTVGGEVNFHASFN HHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEECC GNNLVNAMTVGVARADRIFYSAAAGIGNSVVYVGSKTGRDGIHGATMASAEFSEDSEEKR CCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCHHHCC PTVQVGDPFTEKLLIEACLELMNTDAIVAIQDMGAAGLTSSCFEMASKGGMGVDLALDRV CEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCC PMREEGMTPYELMLSESQERMLMVLKPGKEDMARALFEKWELDFAIIGTLTDSGRMVLTW CCHHCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEE HGEVVGDLPIDPLAAASPEYDRPWEPTPMAAAADLSGAEDTPWSEALLRLIGCPDVASRR CCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCHHHCC WIWEQYDHLVMGNTLQRPGGDAAVIRLDEAPGKGLAMTTDCTPRYVHADPVEGGKQAVAE HHHHHHCCEEECCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCEEECCCCCCHHHHHHH AWRNLTAVGARPLAITDNMNFGNPEKPRIMGQFVGACQGISEACLALDFPVVSGNVSLYN HHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHEEECEEEECCEEEEE ETNGQAILPTPTIGGVGVLDNVEASVSIALKAAGEAILVAGGFHGSTGAWLGQSLFLREI CCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHH LGREEGAPPPVDLAAERKVGDFVRGLILGASVTACHDLSDGGLLVALAEMAMAGDLGAEL HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEECCCCCCCHHHHHHHHHHHCCCCCEE TLEGHPDNGRLFGEDQGRYLLTVAEGDRDAVVAAAEAAGVPLRVVGTTGGDALVVNGFVG EEECCCCCCEEEECCCCCEEEEEECCCCCEEEEEHHHCCCCEEEEECCCCCEEEEECCCC PSVAALRKVHEEWLPTYMAG CHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQSASTPATPITAKIVAEHGLTEAEYAKVLAIMGREPNLVELGIFSVMWSEHCSYKSSK CCCCCCCCCCCEEEHHHHCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCHHH KWLKTLPTTAPWVIQGPGENAGVIDIGDGLTAIFKMESHNHPSYIEPYQGAATGVGGILR HHHHHCCCCCCEEEECCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHH DVFTMGARPVANLNALRFGDPSDPRTRHLISGVVAGIGGYGNCVGVPTVGGEVNFHASFN HHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEECC GNNLVNAMTVGVARADRIFYSAAAGIGNSVVYVGSKTGRDGIHGATMASAEFSEDSEEKR CCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCHHHCC PTVQVGDPFTEKLLIEACLELMNTDAIVAIQDMGAAGLTSSCFEMASKGGMGVDLALDRV CEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCC PMREEGMTPYELMLSESQERMLMVLKPGKEDMARALFEKWELDFAIIGTLTDSGRMVLTW CCHHCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEE HGEVVGDLPIDPLAAASPEYDRPWEPTPMAAAADLSGAEDTPWSEALLRLIGCPDVASRR CCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCHHHCC WIWEQYDHLVMGNTLQRPGGDAAVIRLDEAPGKGLAMTTDCTPRYVHADPVEGGKQAVAE HHHHHHCCEEECCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCEEECCCCCCHHHHHHH AWRNLTAVGARPLAITDNMNFGNPEKPRIMGQFVGACQGISEACLALDFPVVSGNVSLYN HHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHEEECEEEECCEEEEE ETNGQAILPTPTIGGVGVLDNVEASVSIALKAAGEAILVAGGFHGSTGAWLGQSLFLREI CCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHH LGREEGAPPPVDLAAERKVGDFVRGLILGASVTACHDLSDGGLLVALAEMAMAGDLGAEL HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEECCCCCCCHHHHHHHHHHHCCCCCEE TLEGHPDNGRLFGEDQGRYLLTVAEGDRDAVVAAAEAAGVPLRVVGTTGGDALVVNGFVG EEECCCCCCEEEECCCCCEEEEEECCCCCEEEEEHHHCCCCEEEEECCCCCEEEEECCCC PSVAALRKVHEEWLPTYMAG CHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA