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The map label for this gene is yqfA [H]

Identifier: 83592000

GI number: 83592000

Start: 785418

End: 786056

Strand: Reverse

Name: yqfA [H]

Synonym: Rru_A0661

Alternate gene names: 83592000

Gene position: 786056-785418 (Counterclockwise)

Preceding gene: 83592001

Following gene: 83591999

Centisome position: 18.06

GC content: 61.03

Gene sequence:

>639_bases
ATGTCGGGCTCATTGTTTCCGACTTATACCCGTGCCGAGCGGATCGCCGATGCGGCGATCCACATGCTGGGCGTTCCCCT
CGGTCTTATCGCCGCCGTTTGGCTGGTGATCGCCGGGTGGGATGGTGGGCGGACGACAACGGCGAGCGCGATCTACGGCC
TTGGTCTGGTTGGTATGCTGAGCGCCTCCGCGGCCTATAATCTGGCCTCCCACGGAACGCTCAAGCATATCCTCCGGCGC
ATCGACCACGCGATGATCTTCGTGATGATCGCCGGAACCTATACCCCCTTCGCCCTGCTTGGTCTGGGCGGGGAAATGGG
GGGATGGCTTTGCGGGGCGATCTGGACAACGGCGGTGCTTGGCGTCGCCAGCAAGCTGTTGCTGCCCTATGGATGGGAAC
GCCTCAGCCTTGTTCTCTATCTGGCGATGGGGTGGGCGATCCTGACCGTCATCGGCCCGTTGTCGGACGCCCTGTCGATG
CCAGCCATCGTTTTGGTGTTCATCGGCGGCATTCTTTACACGATCGGCACCGCCTTTCATTCGTTCAAGCGCCTGCCCTT
CCAGAACGCTTTTTGGCATCTTCTGGTCCTGGCCGCCGCCGCCTGCCATTTTGCCTCGATCTACTACGAGTTTGTTTAG

Upstream 100 bases:

>100_bases
CCTATCGTCATAAGGTCGGCGGCCCTCCTGGCCCGGTCACCGGTGGCGGCAACCGCCCCCCTCCCCGCCAGCCCCGCCGC
CGCTGATCCCGGAGGTCGCT

Downstream 100 bases:

>100_bases
GGACCCGCTTGCGCCCATCGCGGCGCAAAGGGCCCTCCCCCAGAGATCCAATCCCTGGGTTAGCCGGCCAGACCGATAGG
TCGAAAGCCTATATTACCCA

Product: Hly-III-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSGSLFPTYTRAERIADAAIHMLGVPLGLIAAVWLVIAGWDGGRTTTASAIYGLGLVGMLSASAAYNLASHGTLKHILRR
IDHAMIFVMIAGTYTPFALLGLGGEMGGWLCGAIWTTAVLGVASKLLLPYGWERLSLVLYLAMGWAILTVIGPLSDALSM
PAIVLVFIGGILYTIGTAFHSFKRLPFQNAFWHLLVLAAAACHFASIYYEFV

Sequences:

>Translated_212_residues
MSGSLFPTYTRAERIADAAIHMLGVPLGLIAAVWLVIAGWDGGRTTTASAIYGLGLVGMLSASAAYNLASHGTLKHILRR
IDHAMIFVMIAGTYTPFALLGLGGEMGGWLCGAIWTTAVLGVASKLLLPYGWERLSLVLYLAMGWAILTVIGPLSDALSM
PAIVLVFIGGILYTIGTAFHSFKRLPFQNAFWHLLVLAAAACHFASIYYEFV
>Mature_211_residues
SGSLFPTYTRAERIADAAIHMLGVPLGLIAAVWLVIAGWDGGRTTTASAIYGLGLVGMLSASAAYNLASHGTLKHILRRI
DHAMIFVMIAGTYTPFALLGLGGEMGGWLCGAIWTTAVLGVASKLLLPYGWERLSLVLYLAMGWAILTVIGPLSDALSMP
AIVLVFIGGILYTIGTAFHSFKRLPFQNAFWHLLVLAAAACHFASIYYEFV

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=211, Percent_Identity=28.9099526066351, Blast_Score=67, Evalue=8e-12,
Organism=Homo sapiens, GI52630445, Length=176, Percent_Identity=27.8409090909091, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1789266, Length=203, Percent_Identity=37.4384236453202, Blast_Score=137, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 22663; Mature: 22532

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSLFPTYTRAERIADAAIHMLGVPLGLIAAVWLVIAGWDGGRTTTASAIYGLGLVGML
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SASAAYNLASHGTLKHILRRIDHAMIFVMIAGTYTPFALLGLGGEMGGWLCGAIWTTAVL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
GVASKLLLPYGWERLSLVLYLAMGWAILTVIGPLSDALSMPAIVLVFIGGILYTIGTAFH
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFKRLPFQNAFWHLLVLAAAACHFASIYYEFV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGSLFPTYTRAERIADAAIHMLGVPLGLIAAVWLVIAGWDGGRTTTASAIYGLGLVGML
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SASAAYNLASHGTLKHILRRIDHAMIFVMIAGTYTPFALLGLGGEMGGWLCGAIWTTAVL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
GVASKLLLPYGWERLSLVLYLAMGWAILTVIGPLSDALSMPAIVLVFIGGILYTIGTAFH
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFKRLPFQNAFWHLLVLAAAACHFASIYYEFV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]