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The map label for this gene is yfhC [C]

Identifier: 83591989

GI number: 83591989

Start: 771381

End: 771860

Strand: Reverse

Name: yfhC [C]

Synonym: Rru_A0650

Alternate gene names: 83591989

Gene position: 771860-771381 (Counterclockwise)

Preceding gene: 83591993

Following gene: 83591988

Centisome position: 17.73

GC content: 70.62

Gene sequence:

>480_bases
ATGAGCGCCACCCGCCCGCCCGATCCCGCCCTTGTTCTCGCCGATCCGATGGGATTGGCGCTTGATCTCGCCCGCGCCGC
CGCCGCGACAGGCGAAGTGCCCGTCGGCGCGGTGATCACCGATGCCGGCGGCAGGCCTTTGGCCGCCTGCGCCAATCGGA
CGGAAACCGACCACGACCCGACAGCCCATGCCGAAATCCTGGCCATCCGCGCCGCCTGCGCCCGGCGCGGCGATGCCCGC
TTGCCCGATTGCACCTTGTGGGTCACGCTCGAACCCTGCCCCATGTGCGCCTCGGCGATCGTTCATGCAAGGCTGGCCCG
GGTGATCTTCGGCGCCTATGACCCGAAAGGCGGCGCGGTCGACCATGGGGTGCGCCTGTTCGCCCATCCCGGCTGCCTGC
ACCGGCCCGAGGTGATCGGTGGGATGGCCGAAAGCGCCGCCGCCACCCTGCTTCGCGGCTTTTTCCAGGCCCTCCGATGA

Upstream 100 bases:

>100_bases
AGGGGCCGGGGCCTCGCCCGCAACGGTCGGCGTCGCCCCCGGCGCGATTAGGGCCGGACAGCCCCTTGACCGCCCAGGCG
TTTGCCCGGACTCTGCGGGC

Downstream 100 bases:

>100_bases
TCCATAAAGCCCCATCCCGCCCCCCGCCCCTTTCCGTTGCCCGGCGGACGTGGCATTTTGGGCGAAGCCTTCCGTCAGCG
AGGTCGTCCATGCGACGCAT

Product: tRNA-adenosine deaminase

Products: uracil; NH3

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSATRPPDPALVLADPMGLALDLARAAAATGEVPVGAVITDAGGRPLAACANRTETDHDPTAHAEILAIRAACARRGDAR
LPDCTLWVTLEPCPMCASAIVHARLARVIFGAYDPKGGAVDHGVRLFAHPGCLHRPEVIGGMAESAAATLLRGFFQALR

Sequences:

>Translated_159_residues
MSATRPPDPALVLADPMGLALDLARAAAATGEVPVGAVITDAGGRPLAACANRTETDHDPTAHAEILAIRAACARRGDAR
LPDCTLWVTLEPCPMCASAIVHARLARVIFGAYDPKGGAVDHGVRLFAHPGCLHRPEVIGGMAESAAATLLRGFFQALR
>Mature_158_residues
SATRPPDPALVLADPMGLALDLARAAAATGEVPVGAVITDAGGRPLAACANRTETDHDPTAHAEILAIRAACARRGDARL
PDCTLWVTLEPCPMCASAIVHARLARVIFGAYDPKGGAVDHGVRLFAHPGCLHRPEVIGGMAESAAATLLRGFFQALR

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI145693172, Length=143, Percent_Identity=46.1538461538462, Blast_Score=115, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17541138, Length=143, Percent_Identity=30.0699300699301, Blast_Score=73, Evalue=6e-14,
Organism=Drosophila melanogaster, GI21355527, Length=150, Percent_Identity=34, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: 3.5.4.1

Molecular weight: Translated: 16464; Mature: 16333

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATRPPDPALVLADPMGLALDLARAAAATGEVPVGAVITDAGGRPLAACANRTETDHDP
CCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHCCCCCCCCCC
TAHAEILAIRAACARRGDARLPDCTLWVTLEPCPMCASAIVHARLARVIFGAYDPKGGAV
CHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
DHGVRLFAHPGCLHRPEVIGGMAESAAATLLRGFFQALR
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SATRPPDPALVLADPMGLALDLARAAAATGEVPVGAVITDAGGRPLAACANRTETDHDP
CCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHCCCCCCCCCC
TAHAEILAIRAACARRGDARLPDCTLWVTLEPCPMCASAIVHARLARVIFGAYDPKGGAV
CHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
DHGVRLFAHPGCLHRPEVIGGMAESAAATLLRGFFQALR
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: cytosine; H2O

Specific reaction: cytosine + H2O = uracil + NH3

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA