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The map label for this gene is crtI [H]

Identifier: 83591833

GI number: 83591833

Start: 578808

End: 580331

Strand: Direct

Name: crtI [H]

Synonym: Rru_A0493

Alternate gene names: 83591833

Gene position: 578808-580331 (Clockwise)

Preceding gene: 83591831

Following gene: 83591834

Centisome position: 13.3

GC content: 63.71

Gene sequence:

>1524_bases
ATGAAACTCCACCCAGCGCCTACCGTGCCGACACAAGACCGTCGGCCCCATGCGGTCGTGATCGGAAGCGGGTTCGGCGG
GCTTGCCGCCGCGGTGCGTTTGGGAGCCCGGGGGTACAGGGTGACCGTTCTGGAAAAGCTGGGGGGACCGGGCGGTCGCG
GCGGGGTGTTCAAGCAAGACGGCTTCACCTTCGATGCCGGTCCGACCATCGTCACCTTGCCCAGCCTGTTCGAAGAGCTG
TGGACCCTGTGCGGACGCCAGATGTCCGACGATGTCGACCTGCGGCCGTTGACACCTTTTTATACGATTCGCTTCAACGA
CGGCGAGACCTTCCGCGCCCAATCCGATCCCGAGGCCATGCGCGCCGAGGTCGCCCGCTTGTCGCCCGGCGATGTCGAGG
GCTACGAGCGCTTCATCGCCGAAAGCGAGGATATCTATAAGGTCGGCTTCGAGCAGATGGCCGACAAGCCGTTCTCGTCG
ATCACCGACATGCTGAAGGTGGTGCCCCAGATGCTCAAGCTGGGCGCCCTGCGCTCGGTCTGGGGCCATGTCGCCAAGCA
TGTCGCCGATCCGCGCCTGCGCATCGCGCTGAGTTTCCATCCGCTGTTCATCGGCGGTAACCCGCTGAGCGTGACCTCGA
TCTATTCGATGATCGCCTTTCTTGAACGGCGCTGGGGCGTGCATTTCGCCATGGGCGGCACCCATAGCTTGGTCAAAGGG
CTGGTCGGGCTGATCGAAGGCCAGGGCAATCACCTGCGCTATAACGCCGGCGTCGCCGAGATCTTGGTGAAGAACGACCG
GGCCTGCGGCGTGCGGCTGGAGACCGGCGAGGAGATCGCCGCCGATATCGTCGTCTCCAACGCCGATTCCGCCGCCACCT
ATAAAAACCTGCTGCCCGCCGCCCATCGCCGCTGGTGGAGCGACCGGCGGCTGGCGTGGTCGCGCTATTCGATGAGCCTG
TTCATCTGGCATTTCGGCACCAAGGGCACCTATCCCGATGTCGCCCATCACACCATTCTGATGGGGCCGCGCTATCACAC
GCTGATCGCCGATATCTTCCAGGCCAAGACCCTGGCCAAGGATTTCAGCCTCTATCTCTATCGCCCCACCGCCACCGACC
CGTCGATGGCGCCCGAAGGCTGCGATTCCTTTTACGTGCTGTCGCCCGTGCCCCATCTGGGTGGCGGTCAGGATTGGGCG
CTTGAAGCAGAACCCTATCGCAAGGCGATCCTGGCCGAACTCGAACGCACCGTTCTGCCCGGCCTGGGGGCCAAGATCGT
CACCTCGAAGGTGGTGACCCCCGTTGATTTCCGCGACGGACTGTCCAGCCTGAACGGCGCGGCCTTCGGTCTGGAACCGG
CCTTTACCCAAAGCGCCTGGTTCCGCCCCCACAATAAAAGCGAAGAGATCGACCGGCTTTATCTGGTTGGGGCCGGAACC
CATCCCGGAGCCGGCCTGCCCGGCGTCCTGTCTTCGGCAAAAATCCTCGATACGGTGGTGCCCGATGCCTCGGTCCTGGT
CTAA

Upstream 100 bases:

>100_bases
GGGATGACGGAGAAGCGGTGGTCGCTTCCGCATTGCCGCCCTGTCAGTCGGCTGTTACAGTATCGACTGTAAACCTTTTC
TGTCCAGGTAGTCCTTTCCC

Downstream 100 bases:

>100_bases
TTCGTTGCTGGCGGCGAGCGCCGACGACTATGAGTATTGTCGCAAGCTTATCCGCACCGGCTCGCGGACGTTTCACGCCG
CCTCGCTGCTGTTGCCGGCG

Product: phytoene desaturase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MKLHPAPTVPTQDRRPHAVVIGSGFGGLAAAVRLGARGYRVTVLEKLGGPGGRGGVFKQDGFTFDAGPTIVTLPSLFEEL
WTLCGRQMSDDVDLRPLTPFYTIRFNDGETFRAQSDPEAMRAEVARLSPGDVEGYERFIAESEDIYKVGFEQMADKPFSS
ITDMLKVVPQMLKLGALRSVWGHVAKHVADPRLRIALSFHPLFIGGNPLSVTSIYSMIAFLERRWGVHFAMGGTHSLVKG
LVGLIEGQGNHLRYNAGVAEILVKNDRACGVRLETGEEIAADIVVSNADSAATYKNLLPAAHRRWWSDRRLAWSRYSMSL
FIWHFGTKGTYPDVAHHTILMGPRYHTLIADIFQAKTLAKDFSLYLYRPTATDPSMAPEGCDSFYVLSPVPHLGGGQDWA
LEAEPYRKAILAELERTVLPGLGAKIVTSKVVTPVDFRDGLSSLNGAAFGLEPAFTQSAWFRPHNKSEEIDRLYLVGAGT
HPGAGLPGVLSSAKILDTVVPDASVLV

Sequences:

>Translated_507_residues
MKLHPAPTVPTQDRRPHAVVIGSGFGGLAAAVRLGARGYRVTVLEKLGGPGGRGGVFKQDGFTFDAGPTIVTLPSLFEEL
WTLCGRQMSDDVDLRPLTPFYTIRFNDGETFRAQSDPEAMRAEVARLSPGDVEGYERFIAESEDIYKVGFEQMADKPFSS
ITDMLKVVPQMLKLGALRSVWGHVAKHVADPRLRIALSFHPLFIGGNPLSVTSIYSMIAFLERRWGVHFAMGGTHSLVKG
LVGLIEGQGNHLRYNAGVAEILVKNDRACGVRLETGEEIAADIVVSNADSAATYKNLLPAAHRRWWSDRRLAWSRYSMSL
FIWHFGTKGTYPDVAHHTILMGPRYHTLIADIFQAKTLAKDFSLYLYRPTATDPSMAPEGCDSFYVLSPVPHLGGGQDWA
LEAEPYRKAILAELERTVLPGLGAKIVTSKVVTPVDFRDGLSSLNGAAFGLEPAFTQSAWFRPHNKSEEIDRLYLVGAGT
HPGAGLPGVLSSAKILDTVVPDASVLV
>Mature_507_residues
MKLHPAPTVPTQDRRPHAVVIGSGFGGLAAAVRLGARGYRVTVLEKLGGPGGRGGVFKQDGFTFDAGPTIVTLPSLFEEL
WTLCGRQMSDDVDLRPLTPFYTIRFNDGETFRAQSDPEAMRAEVARLSPGDVEGYERFIAESEDIYKVGFEQMADKPFSS
ITDMLKVVPQMLKLGALRSVWGHVAKHVADPRLRIALSFHPLFIGGNPLSVTSIYSMIAFLERRWGVHFAMGGTHSLVKG
LVGLIEGQGNHLRYNAGVAEILVKNDRACGVRLETGEEIAADIVVSNADSAATYKNLLPAAHRRWWSDRRLAWSRYSMSL
FIWHFGTKGTYPDVAHHTILMGPRYHTLIADIFQAKTLAKDFSLYLYRPTATDPSMAPEGCDSFYVLSPVPHLGGGQDWA
LEAEPYRKAILAELERTVLPGLGAKIVTSKVVTPVDFRDGLSSLNGAAFGLEPAFTQSAWFRPHNKSEEIDRLYLVGAGT
HPGAGLPGVLSSAKILDTVVPDASVLV

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 55369; Mature: 55369

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLHPAPTVPTQDRRPHAVVIGSGFGGLAAAVRLGARGYRVTVLEKLGGPGGRGGVFKQD
CCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCC
GFTFDAGPTIVTLPSLFEELWTLCGRQMSDDVDLRPLTPFYTIRFNDGETFRAQSDPEAM
CEEECCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCHHHH
RAEVARLSPGDVEGYERFIAESEDIYKVGFEQMADKPFSSITDMLKVVPQMLKLGALRSV
HHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
WGHVAKHVADPRLRIALSFHPLFIGGNPLSVTSIYSMIAFLERRWGVHFAMGGTHSLVKG
HHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHH
LVGLIEGQGNHLRYNAGVAEILVKNDRACGVRLETGEEIAADIVVSNADSAATYKNLLPA
HHHHHCCCCCEEEECCCCEEEEEECCCCCEEEECCCCHHEEEEEEECCCCHHHHHHHHHH
AHRRWWSDRRLAWSRYSMSLFIWHFGTKGTYPDVAHHTILMGPRYHTLIADIFQAKTLAK
HHHHHCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
DFSLYLYRPTATDPSMAPEGCDSFYVLSPVPHLGGGQDWALEAEPYRKAILAELERTVLP
CCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCC
GLGAKIVTSKVVTPVDFRDGLSSLNGAAFGLEPAFTQSAWFRPHNKSEEIDRLYLVGAGT
CCCHHHHHHHCCCCCCHHHHHHHCCCCEECCCCCCCCHHCCCCCCCCCCCCEEEEEECCC
HPGAGLPGVLSSAKILDTVVPDASVLV
CCCCCCCHHHHHHHHHHHHCCCCHHCC
>Mature Secondary Structure
MKLHPAPTVPTQDRRPHAVVIGSGFGGLAAAVRLGARGYRVTVLEKLGGPGGRGGVFKQD
CCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCC
GFTFDAGPTIVTLPSLFEELWTLCGRQMSDDVDLRPLTPFYTIRFNDGETFRAQSDPEAM
CEEECCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCHHHH
RAEVARLSPGDVEGYERFIAESEDIYKVGFEQMADKPFSSITDMLKVVPQMLKLGALRSV
HHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
WGHVAKHVADPRLRIALSFHPLFIGGNPLSVTSIYSMIAFLERRWGVHFAMGGTHSLVKG
HHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHH
LVGLIEGQGNHLRYNAGVAEILVKNDRACGVRLETGEEIAADIVVSNADSAATYKNLLPA
HHHHHCCCCCEEEECCCCEEEEEECCCCCEEEECCCCHHEEEEEEECCCCHHHHHHHHHH
AHRRWWSDRRLAWSRYSMSLFIWHFGTKGTYPDVAHHTILMGPRYHTLIADIFQAKTLAK
HHHHHCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
DFSLYLYRPTATDPSMAPEGCDSFYVLSPVPHLGGGQDWALEAEPYRKAILAELERTVLP
CCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCC
GLGAKIVTSKVVTPVDFRDGLSSLNGAAFGLEPAFTQSAWFRPHNKSEEIDRLYLVGAGT
CCCHHHHHHHCCCCCCHHHHHHHCCCCEECCCCCCCCHHCCCCCCCCCCCCEEEEEECCC
HPGAGLPGVLSSAKILDTVVPDASVLV
CCCCCCCHHHHHHHHHHHHCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8021167; 7721699; 10648776 [H]