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The map label for this gene is ybaK [C]

Identifier: 83591675

GI number: 83591675

Start: 407067

End: 407606

Strand: Direct

Name: ybaK [C]

Synonym: Rru_A0335

Alternate gene names: 83591675

Gene position: 407067-407606 (Clockwise)

Preceding gene: 83591674

Following gene: 83591676

Centisome position: 9.35

GC content: 67.59

Gene sequence:

>540_bases
GTGAGCGTTCCCCAATCCGCGTTGTCGACGGCGAATGACGACCTGGCCAATGGCCCCTTGTCCAATAGTTCGGTGCGCCG
GGTGATCGATGCCCTGGCCGCCGGCGGGTCAAATACCCGGGTGGTGGCTTTGACCGATACGGCGCGCAGCGCCCAAGACG
CCGCCCAGGCCCTGGGAACCGAGCTTGGCGCCATCGTCAAATCGCTGGTTTTCGTGATCGGTGACCAACCGGTGATGGCC
CTGGTGGCCGGCGATCGTCAGGCCGATACCGCGGCCCTGCCCGGTTGTCTCGGGCTGGAGGGGCGCTGCAAACGCGCCGA
TGCCGAAGTGGTGCGCGCCGCCACCGGCTTTGCCATCGGCGGTGTCGCCCCGCTTGGCCATCCCGCCGCGCTGCCCATCG
CCTTGGATGCCTCGCTTGGCCGCTTTCCTACGGTTTTCGCCGCCGCCGGCCACCCCCATTGCGTTTTCCCAACCACCCTT
GACGAACTGGCGCGGCTGACCGGCGGGGTGGTTGACGCGCGGATTGCGAAAAACCCGTAA

Upstream 100 bases:

>100_bases
TGATCGGTGATTGATCGGCGGCGGCGATGGGGGCAAAGTTGATCGGGCCCGAGGAGCTTATCAAGACCGACGAACTCAAG
ACCGACGAGGAGTAAGCCCG

Downstream 100 bases:

>100_bases
TTATCGGCTGTCGATCCCTTGACGGCGCCGTTGCGGACTGCTATTTCCTCCTCCCTCGCGCGGGGGCTAGCCGCCCCGCG
ATGACTGGCACCGGAGTGGT

Product: YbaK/prolyl-tRNA synthetase associated region

Products: NA

Alternate protein names: YbaK/EbsC Protein; YbaK/Prolyl-TRNA Synthetase Associated Protein; Ybak/Prolyl-TRNA Synthetase Associated Region; YbaK/EbsC Family Protein; YbaK/Prolyl-TRNA Synthetase Domain-Containing Protein; YbaK/Prolyl-TRNA Synthetase Like Protein; YbaK/Prolyl-TRNA Synthetase Associated Domain-Containing; YbaK/Prolyl-TRNA Synthetase-Associated Domain Protein; YbaK-Like Protein; Misacylated TRNA(Pro) Deacylase; EbsC Protein; YbaK Protein; Prolyl-TRNA Synthetase Like Protein YbaK

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSVPQSALSTANDDLANGPLSNSSVRRVIDALAAGGSNTRVVALTDTARSAQDAAQALGTELGAIVKSLVFVIGDQPVMA
LVAGDRQADTAALPGCLGLEGRCKRADAEVVRAATGFAIGGVAPLGHPAALPIALDASLGRFPTVFAAAGHPHCVFPTTL
DELARLTGGVVDARIAKNP

Sequences:

>Translated_179_residues
MSVPQSALSTANDDLANGPLSNSSVRRVIDALAAGGSNTRVVALTDTARSAQDAAQALGTELGAIVKSLVFVIGDQPVMA
LVAGDRQADTAALPGCLGLEGRCKRADAEVVRAATGFAIGGVAPLGHPAALPIALDASLGRFPTVFAAAGHPHCVFPTTL
DELARLTGGVVDARIAKNP
>Mature_178_residues
SVPQSALSTANDDLANGPLSNSSVRRVIDALAAGGSNTRVVALTDTARSAQDAAQALGTELGAIVKSLVFVIGDQPVMAL
VAGDRQADTAALPGCLGLEGRCKRADAEVVRAATGFAIGGVAPLGHPAALPIALDASLGRFPTVFAAAGHPHCVFPTTLD
ELARLTGGVVDARIAKNP

Specific function: May Be Involved In The Suppression Of Transcription Of Usha. [C]

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17958; Mature: 17826

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPQSALSTANDDLANGPLSNSSVRRVIDALAAGGSNTRVVALTDTARSAQDAAQALGT
CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
ELGAIVKSLVFVIGDQPVMALVAGDRQADTAALPGCLGLEGRCKRADAEVVRAATGFAIG
HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCC
GVAPLGHPAALPIALDASLGRFPTVFAAAGHPHCVFPTTLDELARLTGGVVDARIAKNP
CCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCEECCCCHHHHHHHHCCHHEEEECCCC
>Mature Secondary Structure 
SVPQSALSTANDDLANGPLSNSSVRRVIDALAAGGSNTRVVALTDTARSAQDAAQALGT
CCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
ELGAIVKSLVFVIGDQPVMALVAGDRQADTAALPGCLGLEGRCKRADAEVVRAATGFAIG
HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCC
GVAPLGHPAALPIALDASLGRFPTVFAAAGHPHCVFPTTLDELARLTGGVVDARIAKNP
CCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCEECCCCHHHHHHHHCCHHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA