| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591627
Identifier: 83591627
GI number: 83591627
Start: 352515
End: 353675
Strand: Direct
Name: 83591627
Synonym: Rru_A0287
Alternate gene names: NA
Gene position: 352515-353675 (Clockwise)
Preceding gene: 83591626
Following gene: 83591630
Centisome position: 8.1
GC content: 73.39
Gene sequence:
>1161_bases ATGATGCCCTCCCTGCGCCCCTGTCGGCGTTCCCCGGCGGTCGGGCTCCCCTGGCGCCTCCGCTGTGCCCCCCGAAGGTC CGCCGTGCTTGAAACCCTTGATATCAGCGTTTTTCTTGGTCCCTGGATCATCCCTGTCGGTGCCGTGCTGGGCGGGCTTT TCGGCTATGGGATCGCCCGGTTGTGGCGGGGACGCCACCCCGCCGAGGCGGTGGCGGTGGCGGACGGGGGGCCCCTTGCC CCGGCCGTTCCCCCCCCGGCGGCGGAACCGGTCGAAGCGGCCCCCCCCGTGGTCGAGCCGATCGAACCGGCTCCCCCGGC TCCCGCCGCTCCCCCGGCCCCTGCCGCTCCCAAGCGTGCCGAGCCGGCCCCCGGGGTCGCCGAGGCCCTGGCGCGGGGTC CGGCGGAAGGCGAGGGCGCCGCGCCCGGTTTGTGGCTCGATCACGCCGATGGTCTGGCGGCCGAGGCCCACCACCCGGCG GCCATCGCCGCCCTGGCCCGCGCCCTGGATGGCCTTGACGCGCTGCTTGATGGCGGCGGGGATGATCCGGCCATCGACGC GGCGCTGGCCCGGGCGGCGACCCTGGCGGCGACCCTGGCCGATCGCCCGGGGCTGGCGCGCAGCCAAGCGCTTGGCGGGC GCTTGCGCGAAATCCAGGGCGATCCCGAAGCCGCCCATGGCGCCTATCTGGCCGCCCTTGATCTTTACGAGGGGATGGAC GACCACGACGGCGTGGTGGCGACCTGCGATCTTCTGGCGATGATCCATGCCCGGGCCGATGACCCCGAGGGTGCCGAGGC CTATTGGCGTTACGGCCTGACCCTGGTGACGGAAATGGGAAACCGGGTCGAGGAGGCCCGCCTGCTCGGGCGGCTGGGGG CGGTGGCCTTGTACCGGGAAGACTGGCAGGGCGCCGAAGATGTGCTGGGCGAGGCCCTGGCCCTGGAGGAAAGCTTGGGC AATCTTGGCGCGGCCGGGGCGATCAGCGCCGATCTCGGCCGGCTGGAAGAGGGGCGCGAGCGCCCCAACGAGGCGCTCGC CCATTGGCGGCGGGCGACCTCGCTGTTGATCGAGGCCGGCGAGAGCGAGGGGGAATTGGCGCGAACCTGCGCCGAGGCCG TGCTGCGCCTATTGCCCGCCGTGCCGCCCAAGAAAAGGTAG
Upstream 100 bases:
>100_bases GCTTTGCCGGGTGCCGCTCAAGCCCTGGGCGGGTGATCGGGCGGCCGCTTAAGCCCGGATCGGCTTGATCGGGCATGGAC GAAAGGCGTAAGGGCCCCCT
Downstream 100 bases:
>100_bases GCGGCCGCGGTTCGCGGTGCCCTCAGTCGTCCCAGGCCGGGGCCCAGGACGGGTTGATCAGCCGGCCATCGGGACGGGCG AGGGCGCTGATCTCGGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MMPSLRPCRRSPAVGLPWRLRCAPRRSAVLETLDISVFLGPWIIPVGAVLGGLFGYGIARLWRGRHPAEAVAVADGGPLA PAVPPPAAEPVEAAPPVVEPIEPAPPAPAAPPAPAAPKRAEPAPGVAEALARGPAEGEGAAPGLWLDHADGLAAEAHHPA AIAALARALDGLDALLDGGGDDPAIDAALARAATLAATLADRPGLARSQALGGRLREIQGDPEAAHGAYLAALDLYEGMD DHDGVVATCDLLAMIHARADDPEGAEAYWRYGLTLVTEMGNRVEEARLLGRLGAVALYREDWQGAEDVLGEALALEESLG NLGAAGAISADLGRLEEGRERPNEALAHWRRATSLLIEAGESEGELARTCAEAVLRLLPAVPPKKR
Sequences:
>Translated_386_residues MMPSLRPCRRSPAVGLPWRLRCAPRRSAVLETLDISVFLGPWIIPVGAVLGGLFGYGIARLWRGRHPAEAVAVADGGPLA PAVPPPAAEPVEAAPPVVEPIEPAPPAPAAPPAPAAPKRAEPAPGVAEALARGPAEGEGAAPGLWLDHADGLAAEAHHPA AIAALARALDGLDALLDGGGDDPAIDAALARAATLAATLADRPGLARSQALGGRLREIQGDPEAAHGAYLAALDLYEGMD DHDGVVATCDLLAMIHARADDPEGAEAYWRYGLTLVTEMGNRVEEARLLGRLGAVALYREDWQGAEDVLGEALALEESLG NLGAAGAISADLGRLEEGRERPNEALAHWRRATSLLIEAGESEGELARTCAEAVLRLLPAVPPKKR >Mature_386_residues MMPSLRPCRRSPAVGLPWRLRCAPRRSAVLETLDISVFLGPWIIPVGAVLGGLFGYGIARLWRGRHPAEAVAVADGGPLA PAVPPPAAEPVEAAPPVVEPIEPAPPAPAAPPAPAAPKRAEPAPGVAEALARGPAEGEGAAPGLWLDHADGLAAEAHHPA AIAALARALDGLDALLDGGGDDPAIDAALARAATLAATLADRPGLARSQALGGRLREIQGDPEAAHGAYLAALDLYEGMD DHDGVVATCDLLAMIHARADDPEGAEAYWRYGLTLVTEMGNRVEEARLLGRLGAVALYREDWQGAEDVLGEALALEESLG NLGAAGAISADLGRLEEGRERPNEALAHWRRATSLLIEAGESEGELARTCAEAVLRLLPAVPPKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39928; Mature: 39928
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPSLRPCRRSPAVGLPWRLRCAPRRSAVLETLDISVFLGPWIIPVGAVLGGLFGYGIAR CCCCCCCHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWRGRHPAEAVAVADGGPLAPAVPPPAAEPVEAAPPVVEPIEPAPPAPAAPPAPAAPKRA HHCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPAPGVAEALARGPAEGEGAAPGLWLDHADGLAAEAHHPAAIAALARALDGLDALLDGGG CCCCCHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC DDPAIDAALARAATLAATLADRPGLARSQALGGRLREIQGDPEAAHGAYLAALDLYEGMD CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHCCCCCHHCCHHHHHHHHHCCCC DHDGVVATCDLLAMIHARADDPEGAEAYWRYGLTLVTEMGNRVEEARLLGRLGAVALYRE CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DWQGAEDVLGEALALEESLGNLGAAGAISADLGRLEEGRERPNEALAHWRRATSLLIEAG HCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC ESEGELARTCAEAVLRLLPAVPPKKR CCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MMPSLRPCRRSPAVGLPWRLRCAPRRSAVLETLDISVFLGPWIIPVGAVLGGLFGYGIAR CCCCCCCHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWRGRHPAEAVAVADGGPLAPAVPPPAAEPVEAAPPVVEPIEPAPPAPAAPPAPAAPKRA HHCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPAPGVAEALARGPAEGEGAAPGLWLDHADGLAAEAHHPAAIAALARALDGLDALLDGGG CCCCCHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC DDPAIDAALARAATLAATLADRPGLARSQALGGRLREIQGDPEAAHGAYLAALDLYEGMD CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHCCCCCHHCCHHHHHHHHHCCCC DHDGVVATCDLLAMIHARADDPEGAEAYWRYGLTLVTEMGNRVEEARLLGRLGAVALYRE CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DWQGAEDVLGEALALEESLGNLGAAGAISADLGRLEEGRERPNEALAHWRRATSLLIEAG HCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC ESEGELARTCAEAVLRLLPAVPPKKR CCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA