| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591626
Identifier: 83591626
GI number: 83591626
Start: 351666
End: 352466
Strand: Direct
Name: 83591626
Synonym: Rru_A0286
Alternate gene names: NA
Gene position: 351666-352466 (Clockwise)
Preceding gene: 83591625
Following gene: 83591627
Centisome position: 8.08
GC content: 70.91
Gene sequence:
>801_bases ATGATGGAGCGCGATCAGGTCGCGGTGTATATCGACGAGGGCGCCGTCTTTGAGGATCTGCTGCGCGAGATCGCCCGCGA GATGGACCATGACCGGGCCCGCCTGCGCCCGATCCTGGCCGAGGATATCCTGGCCGCCGGCAACCCTTGGGAACGCACGC TCAGTCTGATCGTCCCGGGCGGCGCCGACAGCCCCTATTGCGCCGCCCTGAACGGCGAGGGCAATGACCGCATCCGCGCC TTCGTCGCCGGGGGTGGTGGCTATCTGGGGATCTGCGCCGGCGCCTATTACGCCTGCCGCGAGATCGCCTTTCACGCCGG GCGCGCCGACGCCGTGGTCGGCCGGCGCGATTTGTCCTTGCTCGCCGCGCGCGCCATTGGCTCGCTGAGCGCTCTGGCTC CGCCCTATGACCGGACGCTGGCCAGCGCGGCGGCGGTTCGCCTGGATTGGCCGGGGCTGGGCGTCTTTCGCGGCCATTAC CACGGCGGTCCGCGCTTCGAGATCGATCCGGGGGCGGCGATCACGGTGCTGGCGCGCTTTGGCGATGTTCCGGGATGCCC CCCCGCCGTCGTCCAGGCCAGCCTTGGCCAGGGCGTGGTGGTCGCTTGCGGCGTCCACCTTGAACAATGCGGGGCGAGCC TGGAGGCGCGCTTGCCCAGCCTCGGCGATGGCGAGGCCCATCGGGGGTTGGCCCGGGCGCTGAGCTCCGATGAAACCCCG CGTCGCCGAGCCTTTCGCCAGATCCTGGCGCTTTGCCGGGTGCCGCTCAAGCCCTGGGCGGGTGATCGGGCGGCCGCTTA A
Upstream 100 bases:
>100_bases TGCCTGGAAGGGCTATATGCGCCGCGCCACCAATACGGTGAACTATTCCGGCGCCCTGCCTTTGGCCCAGGGGGTGAGCT TCGAGCTATAGGAGGCGGGA
Downstream 100 bases:
>100_bases GCCCGGATCGGCTTGATCGGGCATGGACGAAAGGCGTAAGGGCCCCCTATGATGCCCTCCCTGCGCCCCTGTCGGCGTTC CCCGGCGGTCGGGCTCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MMERDQVAVYIDEGAVFEDLLREIAREMDHDRARLRPILAEDILAAGNPWERTLSLIVPGGADSPYCAALNGEGNDRIRA FVAGGGGYLGICAGAYYACREIAFHAGRADAVVGRRDLSLLAARAIGSLSALAPPYDRTLASAAAVRLDWPGLGVFRGHY HGGPRFEIDPGAAITVLARFGDVPGCPPAVVQASLGQGVVVACGVHLEQCGASLEARLPSLGDGEAHRGLARALSSDETP RRRAFRQILALCRVPLKPWAGDRAAA
Sequences:
>Translated_266_residues MMERDQVAVYIDEGAVFEDLLREIAREMDHDRARLRPILAEDILAAGNPWERTLSLIVPGGADSPYCAALNGEGNDRIRA FVAGGGGYLGICAGAYYACREIAFHAGRADAVVGRRDLSLLAARAIGSLSALAPPYDRTLASAAAVRLDWPGLGVFRGHY HGGPRFEIDPGAAITVLARFGDVPGCPPAVVQASLGQGVVVACGVHLEQCGASLEARLPSLGDGEAHRGLARALSSDETP RRRAFRQILALCRVPLKPWAGDRAAA >Mature_266_residues MMERDQVAVYIDEGAVFEDLLREIAREMDHDRARLRPILAEDILAAGNPWERTLSLIVPGGADSPYCAALNGEGNDRIRA FVAGGGGYLGICAGAYYACREIAFHAGRADAVVGRRDLSLLAARAIGSLSALAPPYDRTLASAAAVRLDWPGLGVFRGHY HGGPRFEIDPGAAITVLARFGDVPGCPPAVVQASLGQGVVVACGVHLEQCGASLEARLPSLGDGEAHRGLARALSSDETP RRRAFRQILALCRVPLKPWAGDRAAA
Specific function: Unknown
COG id: COG4285
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0128/CT_035/TC_0305 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320060, Length=223, Percent_Identity=28.6995515695067, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019197 - InterPro: IPR015834 [H]
Pfam domain/function: PF09825 BPL_N [H]
EC number: NA
Molecular weight: Translated: 28130; Mature: 28130
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMERDQVAVYIDEGAVFEDLLREIAREMDHDRARLRPILAEDILAAGNPWERTLSLIVPG CCCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHEEEEEECC GADSPYCAALNGEGNDRIRAFVAGGGGYLGICAGAYYACREIAFHAGRADAVVGRRDLSL CCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHH LAARAIGSLSALAPPYDRTLASAAAVRLDWPGLGVFRGHYHGGPRFEIDPGAAITVLARF HHHHHHHHHHHCCCCHHHHHHHHHEEEECCCCCCEEECCCCCCCEEEECCCHHHHHHHHH GDVPGCPPAVVQASLGQGVVVACGVHLEQCGASLEARLPSLGDGEAHRGLARALSSDETP CCCCCCCHHHHHHHCCCCEEEEECCCHHHHCCHHHHCCCCCCCCHHHHHHHHHHCCCCCH RRRAFRQILALCRVPLKPWAGDRAAA HHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MMERDQVAVYIDEGAVFEDLLREIAREMDHDRARLRPILAEDILAAGNPWERTLSLIVPG CCCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHEEEEEECC GADSPYCAALNGEGNDRIRAFVAGGGGYLGICAGAYYACREIAFHAGRADAVVGRRDLSL CCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHH LAARAIGSLSALAPPYDRTLASAAAVRLDWPGLGVFRGHYHGGPRFEIDPGAAITVLARF HHHHHHHHHHHCCCCHHHHHHHHHEEEECCCCCCEEECCCCCCCEEEECCCHHHHHHHHH GDVPGCPPAVVQASLGQGVVVACGVHLEQCGASLEARLPSLGDGEAHRGLARALSSDETP CCCCCCCHHHHHHHCCCCEEEEECCCHHHHCCHHHHCCCCCCCCHHHHHHHHHHCCCCCH RRRAFRQILALCRVPLKPWAGDRAAA HHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]