| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is apaG [H]
Identifier: 83591610
GI number: 83591610
Start: 335633
End: 336040
Strand: Direct
Name: apaG [H]
Synonym: Rru_A0270
Alternate gene names: 83591610
Gene position: 335633-336040 (Clockwise)
Preceding gene: 83591609
Following gene: 83591611
Centisome position: 7.71
GC content: 64.46
Gene sequence:
>408_bases ATGACCGACGAAACCGTCTATGAGCGAACGACCGAAGGGATCACCGTGCGCGTGCTTCCAATCTTCCTCGACGAGCAATC CGAGCCCGAGCGCGGCCATTATCTGTGGGCCTATCAGGTTCTGATCGTCAACCGCGGGGCGCGGACCGTGCAACTGATGC GCCGACACTGGATCGTGACCGACGCCTTCGGCCGGGTTCAGGAAGTGGAAGGCGAAGGCGTGGTCGGCGAGCAGCCGATT CTCGCGCCCGGGGCGCAGTTTGATTACACCTCGGGCACGCCGCTGCCCACGCCCTCGGGATTCATGGGCGGCAGCTATCT GATGCGCGACGACACCGGCCGCGAGTTGACCGTCGCCATTCCCACCTTCAGCCTCAACAGCCCGGAATCGGCGGGGCATC TGCACTGA
Upstream 100 bases:
>100_bases TGATAAGCTGCCCAATATGGGGGATAGGCCCGGTACTTCGGGGTCATCTCCGCCCCTTGGCCCCCCCCTCGGCCCGTCCC TTGAACGGAGCGCCTTAGGC
Downstream 100 bases:
>100_bases TCGCCACCCCGGTTTCGGCTGGCGGGGGGCAAGGAAAGAGGCAATGCTTGCGTCCCCCGGGTGAAATCTCCATGTAGGAC CCTGCGGGGTAAGGCGGTCC
Product: ApaG protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTDETVYERTTEGITVRVLPIFLDEQSEPERGHYLWAYQVLIVNRGARTVQLMRRHWIVTDAFGRVQEVEGEGVVGEQPI LAPGAQFDYTSGTPLPTPSGFMGGSYLMRDDTGRELTVAIPTFSLNSPESAGHLH
Sequences:
>Translated_135_residues MTDETVYERTTEGITVRVLPIFLDEQSEPERGHYLWAYQVLIVNRGARTVQLMRRHWIVTDAFGRVQEVEGEGVVGEQPI LAPGAQFDYTSGTPLPTPSGFMGGSYLMRDDTGRELTVAIPTFSLNSPESAGHLH >Mature_134_residues TDETVYERTTEGITVRVLPIFLDEQSEPERGHYLWAYQVLIVNRGARTVQLMRRHWIVTDAFGRVQEVEGEGVVGEQPIL APGAQFDYTSGTPLPTPSGFMGGSYLMRDDTGRELTVAIPTFSLNSPESAGHLH
Specific function: Unknown
COG id: COG2967
COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 apaG domain [H]
Homologues:
Organism=Homo sapiens, GI7661672, Length=123, Percent_Identity=34.9593495934959, Blast_Score=76, Evalue=7e-15, Organism=Homo sapiens, GI15812188, Length=125, Percent_Identity=40.8, Blast_Score=72, Evalue=1e-13, Organism=Homo sapiens, GI15812186, Length=125, Percent_Identity=40.8, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786235, Length=115, Percent_Identity=43.4782608695652, Blast_Score=105, Evalue=7e-25, Organism=Drosophila melanogaster, GI21356905, Length=134, Percent_Identity=36.5671641791045, Blast_Score=89, Evalue=7e-19, Organism=Drosophila melanogaster, GI24644238, Length=134, Percent_Identity=36.5671641791045, Blast_Score=89, Evalue=8e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007474 - InterPro: IPR023065 [H]
Pfam domain/function: PF04379 DUF525 [H]
EC number: NA
Molecular weight: Translated: 15022; Mature: 14891
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS51087 APAG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDETVYERTTEGITVRVLPIFLDEQSEPERGHYLWAYQVLIVNRGARTVQLMRRHWIVT CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCEEE DAFGRVQEVEGEGVVGEQPILAPGAQFDYTSGTPLPTPSGFMGGSYLMRDDTGRELTVAI CCCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEE PTFSLNSPESAGHLH EEEECCCCCCCCCCC >Mature Secondary Structure TDETVYERTTEGITVRVLPIFLDEQSEPERGHYLWAYQVLIVNRGARTVQLMRRHWIVT CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCEEE DAFGRVQEVEGEGVVGEQPILAPGAQFDYTSGTPLPTPSGFMGGSYLMRDDTGRELTVAI CCCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEE PTFSLNSPESAGHLH EEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA